RNA–Protein interactions for RNA: ENST00000558963.2

AC087516.2-201, humanhuman

TSL 3 BASIC

Gene AC087516.2, Length 3,042 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087516.2-201ENST00000558963 CRACR2BQ8N4Y2 399 aaPredicted RBP7.4□□□□□ -1.22
AC087516.2-201ENST00000558963 TUBB2BQ9BVA1 445 aa7.4□□□□□ -1.22
AC087516.2-201ENST00000558963 COL1A1P02452 1464 aaPredicted RBP7.4□□□□□ -1.22
AC087516.2-201ENST00000558963 ARHGAP6O43182 974 aa7.4□□□□□ -1.23
AC087516.2-201ENST00000558963 PRPF3O43395 683 aaKnown RBP7.4□□□□□ -1.23
AC087516.2-201ENST00000558963 UBE4AQ14139 1066 aa7.4□□□□□ -1.23
AC087516.2-201ENST00000558963 TMEM67Q5HYA8 995 aa7.4□□□□□ -1.23
AC087516.2-201ENST00000558963 BARGINQ6ZT62 677 aa7.4□□□□□ -1.23
AC087516.2-201ENST00000558963 FILIP1Q7Z7B0 1213 aa7.4□□□□□ -1.23
AC087516.2-201ENST00000558963 DZIP3Q86Y13 1208 aaKnown RBP7.4□□□□□ -1.23
AC087516.2-201ENST00000558963 TRIM22Q8IYM9 498 aa7.4□□□□□ -1.23
AC087516.2-201ENST00000558963 STK11IPQ8N1F8 1099 aa7.4□□□□□ -1.23
AC087516.2-201ENST00000558963 TNFRSF25Q93038 417 aa7.4□□□□□ -1.23
AC087516.2-201ENST00000558963 FERMT2Q96AC1 680 aa7.4□□□□□ -1.23
AC087516.2-201ENST00000558963 CCDC34Q96HJ3 373 aa7.4□□□□□ -1.23
AC087516.2-201ENST00000558963 NAA15Q9BXJ9 866 aaKnown RBP7.4□□□□□ -1.23
AC087516.2-201ENST00000558963 CCDC87Q9NVE4 849 aa7.4□□□□□ -1.23
AC087516.2-201ENST00000558963 ZSWIM5Q9P217 1185 aa7.4□□□□□ -1.23
AC087516.2-201ENST00000558963 TRMT112Q9UI30 125 aaKnown RBP7.4□□□□□ -1.23
AC087516.2-201ENST00000558963 KCNH3Q9ULD8 1083 aa7.4□□□□□ -1.23
AC087516.2-201ENST00000558963 WWC3Q9ULE0 1092 aa7.4□□□□□ -1.23
AC087516.2-201ENST00000558963 ZBTB1Q9Y2K1 713 aa7.4□□□□□ -1.23
AC087516.2-201ENST00000558963 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.4□□□□□ -1.23
AC087516.2-201ENST00000558963 FHOD1Q9Y613 1164 aa7.4□□□□□ -1.23
AC087516.2-201ENST00000558963 SLC12A7Q9Y666 1083 aa7.4□□□□□ -1.23
AC087516.2-201ENST00000558963 AFF2P51816 1311 aa7.39□□□□□ -1.23
AC087516.2-201ENST00000558963 ACTN4O43707 911 aaKnown RBP7.39□□□□□ -1.23
AC087516.2-201ENST00000558963 STX10O60499 249 aa7.39□□□□□ -1.23
AC087516.2-201ENST00000558963 TOB1P50616 345 aaPredicted RBP7.39□□□□□ -1.23
AC087516.2-201ENST00000558963 ETF1P62495 437 aaKnown RBP7.39□□□□□ -1.23
AC087516.2-201ENST00000558963 SAFBQ15424 915 aaKnown RBP eCLIP7.39□□□□□ -1.23
AC087516.2-201ENST00000558963 ANKS1AQ92625 1134 aa7.39□□□□□ -1.23
AC087516.2-201ENST00000558963 MPHOSPH8Q99549 860 aa7.39□□□□□ -1.23
AC087516.2-201ENST00000558963 UTP14AQ9BVJ6 771 aaKnown RBP7.39□□□□□ -1.23
AC087516.2-201ENST00000558963 NAPBQ9H115 298 aa7.39□□□□□ -1.23
AC087516.2-201ENST00000558963 CYP2C19P33261 490 aa7.39□□□□□ -1.23
AC087516.2-201ENST00000558963 EVA1CP58658 441 aa7.39□□□□□ -1.23
AC087516.2-201ENST00000558963 HAND2P61296 217 aa7.39□□□□□ -1.23
AC087516.2-201ENST00000558963 RTN1Q16799 776 aa7.39□□□□□ -1.23
AC087516.2-201ENST00000558963 SBK1Q52WX2 424 aa7.39□□□□□ -1.23
AC087516.2-201ENST00000558963 MFSD6Q6ZSS7 791 aa7.39□□□□□ -1.23
AC087516.2-201ENST00000558963 ZNF592Q92610 1267 aa7.39□□□□□ -1.23
AC087516.2-201ENST00000558963 PANX2Q96RD6 677 aa7.39□□□□□ -1.23
AC087516.2-201ENST00000558963 PHF20Q9BVI0 1012 aa7.39□□□□□ -1.23
AC087516.2-201ENST00000558963 IFNKQ9P0W0 207 aa7.39□□□□□ -1.23
AC087516.2-201ENST00000558963 CALCOCO1Q9P1Z2 691 aa7.39□□□□□ -1.23
AC087516.2-201ENST00000558963 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.39□□□□□ -1.23
AC087516.2-201ENST00000558963 TACC3Q9Y6A5 838 aa7.39□□□□□ -1.23
AC087516.2-201ENST00000558963 CNTNAP4Q9C0A0 1308 aa7.39□□□□□ -1.23
AC087516.2-201ENST00000558963 B4E1Z4 1266 aa7.38□□□□□ -1.23
AC087516.2-201ENST00000558963 ZSCAN12O43309 604 aa7.38□□□□□ -1.23
AC087516.2-201ENST00000558963 PBX1P40424 430 aa7.38□□□□□ -1.23
AC087516.2-201ENST00000558963 TRIM65Q6PJ69 517 aa7.38□□□□□ -1.23
AC087516.2-201ENST00000558963 OLFM4Q6UX06 510 aa7.38□□□□□ -1.23
AC087516.2-201ENST00000558963 PI16Q6UXB8 463 aa7.38□□□□□ -1.23
AC087516.2-201ENST00000558963 CHST3Q7LGC8 479 aa7.38□□□□□ -1.23
AC087516.2-201ENST00000558963 NUTM2AQ8IVF1 878 aaPredicted RBP7.38□□□□□ -1.23
AC087516.2-201ENST00000558963 CCDC51Q96ER9 411 aa7.38□□□□□ -1.23
AC087516.2-201ENST00000558963 RIOK1Q9BRS2 568 aaKnown RBP7.38□□□□□ -1.23
AC087516.2-201ENST00000558963 SH3GLB2Q9NR46 395 aa7.38□□□□□ -1.23
AC087516.2-201ENST00000558963 STRN4Q9NRL3 753 aa7.38□□□□□ -1.23
AC087516.2-201ENST00000558963 DNAI1Q9UI46 699 aa7.38□□□□□ -1.23
AC087516.2-201ENST00000558963 LTBP1Q14766 1721 aa7.38□□□□□ -1.23
AC087516.2-201ENST00000558963 SPATA31A1Q5TZJ5 1347 aa7.38□□□□□ -1.23
AC087516.2-201ENST00000558963 A0A1B0GTH6 734 aa7.38□□□□□ -1.23
AC087516.2-201ENST00000558963 EFCAB8A8MWE9 144 aa7.38□□□□□ -1.23
AC087516.2-201ENST00000558963 TULP2O00295 520 aa7.38□□□□□ -1.23
AC087516.2-201ENST00000558963 MBD4O95243 580 aa7.38□□□□□ -1.23
AC087516.2-201ENST00000558963 MYL1P05976 194 aa7.38□□□□□ -1.23
AC087516.2-201ENST00000558963 PLCD1P51178 756 aa7.38□□□□□ -1.23
AC087516.2-201ENST00000558963 GUCY1B3Q02153 619 aa7.38□□□□□ -1.23
AC087516.2-201ENST00000558963 CEBPZQ03701 1054 aaKnown RBP7.38□□□□□ -1.23
AC087516.2-201ENST00000558963 WTAPQ15007 396 aa7.38□□□□□ -1.23
AC087516.2-201ENST00000558963 POSTNQ15063 836 aa7.38□□□□□ -1.23
AC087516.2-201ENST00000558963 SMARCC1Q92922 1105 aaPredicted RBP7.38□□□□□ -1.23
AC087516.2-201ENST00000558963 GSDMAQ96QA5 445 aa7.38□□□□□ -1.23
AC087516.2-201ENST00000558963 BAZ2AQ9UIF9 1905 aaKnown RBP7.38□□□□□ -1.23
AC087516.2-201ENST00000558963 IRS2Q9Y4H2 1338 aa7.38□□□□□ -1.23
AC087516.2-201ENST00000558963 IFIT3O14879 490 aaKnown RBP7.38□□□□□ -1.23
AC087516.2-201ENST00000558963 POLR3DP05423 398 aaPredicted RBP7.38□□□□□ -1.23
AC087516.2-201ENST00000558963 XBP1P17861 261 aa7.38□□□□□ -1.23
AC087516.2-201ENST00000558963 CLCN6P51797 869 aa7.38□□□□□ -1.23
AC087516.2-201ENST00000558963 CDKAL1Q5VV42 579 aa7.38□□□□□ -1.23
AC087516.2-201ENST00000558963 CERS3Q8IU89 383 aa7.38□□□□□ -1.23
AC087516.2-201ENST00000558963 FANCBQ8NB91 859 aa7.38□□□□□ -1.23
AC087516.2-201ENST00000558963 ESR2Q92731 530 aa7.38□□□□□ -1.23
AC087516.2-201ENST00000558963 ARGLU1Q9NWB6 273 aaPredicted RBP7.38□□□□□ -1.23
AC087516.2-201ENST00000558963 ZNF652Q9Y2D9 606 aa7.38□□□□□ -1.23
AC087516.2-201ENST00000558963 LRRC10BA6NIK2 292 aa7.37□□□□□ -1.23
AC087516.2-201ENST00000558963 TADA3O75528 432 aa7.37□□□□□ -1.23
AC087516.2-201ENST00000558963 PNMA6AP0CW24 399 aaPredicted RBP7.37□□□□□ -1.23
AC087516.2-201ENST00000558963 BMP6P22004 513 aa7.37□□□□□ -1.23
AC087516.2-201ENST00000558963 PPARAQ07869 468 aa7.37□□□□□ -1.23
AC087516.2-201ENST00000558963 ORC2Q13416 577 aaPredicted RBP7.37□□□□□ -1.23
AC087516.2-201ENST00000558963 ARL6IP4Q66PJ3 421 aaKnown RBP7.37□□□□□ -1.23
AC087516.2-201ENST00000558963 ZNF662Q6ZS27 426 aa7.37□□□□□ -1.23
AC087516.2-201ENST00000558963 APTXQ7Z2E3 356 aaKnown RBP7.37□□□□□ -1.23
AC087516.2-201ENST00000558963 TMC6Q7Z403 805 aa7.37□□□□□ -1.23
AC087516.2-201ENST00000558963 FOXP4Q8IVH2 680 aaPredicted RBP7.37□□□□□ -1.23
AC087516.2-201ENST00000558963 REXO1L1PQ8IX06 675 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms