RNA–Protein interactions for RNA: ENST00000558961.1

BMP4-204, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-204ENST00000558961 SPP2Q13103 211 aa13.57□□□□□ -0.24
BMP4-204ENST00000558961 ZSCAN25Q6NSZ9 544 aa13.57□□□□□ -0.24
BMP4-204ENST00000558961 PI4K2BQ8TCG2 481 aa13.57□□□□□ -0.24
BMP4-204ENST00000558961 TRIM34Q9BYJ4 488 aa13.57□□□□□ -0.24
BMP4-204ENST00000558961 BCL11AQ9H165 835 aa13.57□□□□□ -0.24
BMP4-204ENST00000558961 EFCC1Q9HA90 598 aa13.57□□□□□ -0.24
BMP4-204ENST00000558961 AS3MTQ9HBK9 375 aa13.57□□□□□ -0.24
BMP4-204ENST00000558961 DCP1AQ9NPI6 582 aaPredicted RBP13.57□□□□□ -0.24
BMP4-204ENST00000558961 GREB1LQ9C091 1923 aaPredicted RBP13.56□□□□□ -0.24
BMP4-204ENST00000558961 MBD4O95243 580 aa13.56□□□□□ -0.24
BMP4-204ENST00000558961 CHGBP05060 677 aa13.56□□□□□ -0.24
BMP4-204ENST00000558961 PLCD1P51178 756 aa13.56□□□□□ -0.24
BMP4-204ENST00000558961 ARHGEF6Q15052 776 aa13.56□□□□□ -0.24
BMP4-204ENST00000558961 SHROOM1Q2M3G4 852 aaPredicted RBP13.56□□□□□ -0.24
BMP4-204ENST00000558961 SLFNL1Q499Z3 407 aa13.56□□□□□ -0.24
BMP4-204ENST00000558961 GADL1Q6ZQY3 521 aa13.56□□□□□ -0.24
BMP4-204ENST00000558961 SDR42E1Q8WUS8 393 aa13.56□□□□□ -0.24
BMP4-204ENST00000558961 GCC1Q96CN9 775 aa13.56□□□□□ -0.24
BMP4-204ENST00000558961 ARMT1Q9H993 441 aa13.56□□□□□ -0.24
BMP4-204ENST00000558961 ATP8A2Q9NTI2 1148 aa13.56□□□□□ -0.24
BMP4-204ENST00000558961 GDF11O95390 407 aa13.55□□□□□ -0.24
BMP4-204ENST00000558961 CYP2C8P10632 490 aa13.55□□□□□ -0.24
BMP4-204ENST00000558961 SHMT1P34896 483 aa13.55□□□□□ -0.24
BMP4-204ENST00000558961 BACE1P56817 501 aa13.55□□□□□ -0.24
BMP4-204ENST00000558961 SLC4A8Q2Y0W8 1093 aa13.55□□□□□ -0.24
BMP4-204ENST00000558961 TREML2Q5T2D2 321 aa13.55□□□□□ -0.24
BMP4-204ENST00000558961 TSHZ3Q63HK5 1081 aa13.55□□□□□ -0.24
BMP4-204ENST00000558961 MCM9Q9NXL9 1143 aa13.55□□□□□ -0.24
BMP4-204ENST00000558961 CPA4Q9UI42 421 aa13.55□□□□□ -0.24
BMP4-204ENST00000558961 C19orf81C9J6K1 198 aa13.54□□□□□ -0.24
BMP4-204ENST00000558961 ERC2O15083 957 aa13.54□□□□□ -0.24
BMP4-204ENST00000558961 GLRX3O76003 335 aaKnown RBP13.54□□□□□ -0.24
BMP4-204ENST00000558961 ZFYP08048 801 aaPredicted RBP13.54□□□□□ -0.24
BMP4-204ENST00000558961 MX1P20591 662 aa13.54□□□□□ -0.24
BMP4-204ENST00000558961 CTGFP29279 349 aa13.54□□□□□ -0.24
BMP4-204ENST00000558961 HMGCS2P54868 508 aa13.54□□□□□ -0.24
BMP4-204ENST00000558961 PRMT2P55345 433 aa13.54□□□□□ -0.24
BMP4-204ENST00000558961 MTMR2Q13614 643 aa13.54□□□□□ -0.24
BMP4-204ENST00000558961 KIF22Q14807 665 aa13.54□□□□□ -0.24
BMP4-204ENST00000558961 OTUD7AQ8TE49 926 aaPredicted RBP13.54□□□□□ -0.24
BMP4-204ENST00000558961 ARMC5Q96C12 935 aa13.54□□□□□ -0.24
BMP4-204ENST00000558961 ARHGAP39Q9C0H5 1083 aa13.54□□□□□ -0.24
BMP4-204ENST00000558961 PUS7LQ9H0K6 701 aaKnown RBP13.54□□□□□ -0.24
BMP4-204ENST00000558961 PNMA3Q9UL41 463 aa13.54□□□□□ -0.24
BMP4-204ENST00000558961 PRKAB2O43741 272 aa13.53□□□□□ -0.24
BMP4-204ENST00000558961 GH2P01242 217 aa13.53□□□□□ -0.24
BMP4-204ENST00000558961 POLR3DP05423 398 aaPredicted RBP13.53□□□□□ -0.24
BMP4-204ENST00000558961 HOXA7P31268 230 aaPredicted RBP13.53□□□□□ -0.24
BMP4-204ENST00000558961 EVX2Q03828 476 aa13.53□□□□□ -0.24
BMP4-204ENST00000558961 PABPC4Q13310 644 aaKnown RBP eCLIP13.53□□□□□ -0.24
BMP4-204ENST00000558961 CERKLQ49MI3 558 aaPredicted RBP13.53□□□□□ -0.24
BMP4-204ENST00000558961 SMC5Q8IY18 1101 aa13.53□□□□□ -0.24
BMP4-204ENST00000558961 APPBP2Q92624 585 aa13.53□□□□□ -0.24
BMP4-204ENST00000558961 TRIM47Q96LD4 638 aa13.53□□□□□ -0.24
BMP4-204ENST00000558961 C12orf42Q96LP6 360 aa13.53□□□□□ -0.24
BMP4-204ENST00000558961 SWAP70Q9UH65 585 aa13.53□□□□□ -0.24
BMP4-204ENST00000558961 A0A0G2JMZ2 1700 aa13.53□□□□□ -0.24
BMP4-204ENST00000558961 PARP14Q460N5 1801 aa13.53□□□□□ -0.24
BMP4-204ENST00000558961 USP17L10C9JJH3 530 aa13.52□□□□□ -0.25
BMP4-204ENST00000558961 FAM110CQ1W6H9 321 aa13.52□□□□□ -0.25
BMP4-204ENST00000558961 C12orf60Q5U649 245 aa13.52□□□□□ -0.25
BMP4-204ENST00000558961 B4GALNT3Q6L9W6 998 aa13.52□□□□□ -0.25
BMP4-204ENST00000558961 SMCR8Q8TEV9 937 aaPredicted RBP13.52□□□□□ -0.25
BMP4-204ENST00000558961 OSBP2Q969R2 916 aa13.52□□□□□ -0.25
BMP4-204ENST00000558961 KIAA1683Q9H0B3 1180 aa13.52□□□□□ -0.25
BMP4-204ENST00000558961 STAP2Q9UGK3 403 aa13.52□□□□□ -0.25
BMP4-204ENST00000558961 ROBO3Q96MS0 1386 aa13.52□□□□□ -0.25
BMP4-204ENST00000558961 CENPFP49454 3210 aa13.51□□□□□ -0.25
BMP4-204ENST00000558961 RLFQ13129 1914 aa13.51□□□□□ -0.25
BMP4-204ENST00000558961 PLXNB2O15031 1838 aa13.51□□□□□ -0.25
BMP4-204ENST00000558961 RNF113AO15541 343 aaKnown RBP13.51□□□□□ -0.25
BMP4-204ENST00000558961 CYP2D6P10635 497 aa13.51□□□□□ -0.25
BMP4-204ENST00000558961 GUCY1A2P33402 732 aa13.51□□□□□ -0.25
BMP4-204ENST00000558961 PSMC4P43686 418 aa13.51□□□□□ -0.25
BMP4-204ENST00000558961 GCLCP48506 637 aaPredicted RBP13.51□□□□□ -0.25
BMP4-204ENST00000558961 SOX10P56693 466 aa13.51□□□□□ -0.25
BMP4-204ENST00000558961 ABCB5Q2M3G0 1257 aa13.51□□□□□ -0.25
BMP4-204ENST00000558961 LRRFIP1Q32MZ4 808 aaKnown RBP13.51□□□□□ -0.25
BMP4-204ENST00000558961 GIMAP6Q6P9H5 292 aa13.51□□□□□ -0.25
BMP4-204ENST00000558961 STRBPQ96SI9 672 aaKnown RBP13.51□□□□□ -0.25
BMP4-204ENST00000558961 ASCC2Q9H1I8 757 aaPredicted RBP13.51□□□□□ -0.25
BMP4-204ENST00000558961 ARPP21Q9UBL0 812 aaPredicted RBP13.51□□□□□ -0.25
BMP4-204ENST00000558961 SRRDQ9UH36 339 aa13.51□□□□□ -0.25
BMP4-204ENST00000558961 PTCH2Q9Y6C5 1203 aa13.51□□□□□ -0.25
BMP4-204ENST00000558961 GSG1L2A8MUP6 293 aa13.5□□□□□ -0.25
BMP4-204ENST00000558961 OSBPP22059 807 aa13.5□□□□□ -0.25
BMP4-204ENST00000558961 ANKRD45Q5TZF3 282 aa13.5□□□□□ -0.25
BMP4-204ENST00000558961 C16orf86Q6ZW13 317 aa13.5□□□□□ -0.25
BMP4-204ENST00000558961 SLC44A5Q8NCS7 719 aa13.5□□□□□ -0.25
BMP4-204ENST00000558961 DDRGK1Q96HY6 314 aa13.5□□□□□ -0.25
BMP4-204ENST00000558961 ZNF333Q96JL9 665 aa13.5□□□□□ -0.25
BMP4-204ENST00000558961 EMILIN3Q9NT22 766 aa13.5□□□□□ -0.25
BMP4-204ENST00000558961 TMOD4Q9NZQ9 345 aa13.5□□□□□ -0.25
BMP4-204ENST00000558961 MORF4L1Q9UBU8 362 aa13.5□□□□□ -0.25
BMP4-204ENST00000558961 SLC4A4Q9Y6R1 1079 aa13.5□□□□□ -0.25
BMP4-204ENST00000558961 DOCK3Q8IZD9 2030 aa13.5□□□□□ -0.25
BMP4-204ENST00000558961 TNRC18O15417 2968 aaPredicted RBP13.5□□□□□ -0.25
BMP4-204ENST00000558961 USP17L12C9JPN9 530 aa13.49□□□□□ -0.25
BMP4-204ENST00000558961 USP17L21D6R901 530 aa13.49□□□□□ -0.25
BMP4-204ENST00000558961 GPAA1O43292 621 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms