RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 POLR2AP24928 1970 aaKnown RBP21.3■■□□□ 1
CLPX-203ENST00000558958 TSPY2A6NKD2 308 aa21.3■■□□□ 1
CLPX-203ENST00000558958 TOB2Q14106 344 aaPredicted RBP21.3■■□□□ 1
CLPX-203ENST00000558958 NBPF12Q5TAG4 269 aaPredicted RBP21.3■■□□□ 1
CLPX-203ENST00000558958 KRT26Q7Z3Y9 468 aa21.3■■□□□ 1
CLPX-203ENST00000558958 TMEM87BQ96K49 555 aa21.3■■□□□ 1
CLPX-203ENST00000558958 ANKRD1Q15327 319 aa21.29■■□□□ 1
CLPX-203ENST00000558958 PRAMEF18Q5VWM3 479 aa21.29■■□□□ 1
CLPX-203ENST00000558958 IGDCC4Q8TDY8 1250 aa21.29■■□□□ 1
CLPX-203ENST00000558958 CCDC17Q96LX7 622 aa21.29■■□□□ 1
CLPX-203ENST00000558958 NMRK2Q9NPI5 230 aa21.29■■□□□ 1
CLPX-203ENST00000558958 ADM5C9JUS6 153 aa21.28■■□□□ 1
CLPX-203ENST00000558958 TSPY3P0CV98 308 aa21.28■■□□□ 1
CLPX-203ENST00000558958 TSPY8P0CW00 308 aa21.28■■□□□ 1
CLPX-203ENST00000558958 MCM2P49736 904 aa21.28■■□□□ 1
CLPX-203ENST00000558958 FGD1P98174 961 aa21.28■■□□□ 1
CLPX-203ENST00000558958 SART3Q15020 963 aaKnown RBP21.28■■□□□ 1
CLPX-203ENST00000558958 MIGA2Q7L4E1 593 aa21.28■■□□□ 1
CLPX-203ENST00000558958 IQCA1Q86XH1 822 aa21.28■■□□□ 1
CLPX-203ENST00000558958 NEDD1Q8NHV4 660 aa21.28■■□□□ 1
CLPX-203ENST00000558958 ZNF526Q8TF50 670 aaPredicted RBP21.28■■□□□ 1
CLPX-203ENST00000558958 HOOK2Q96ED9 719 aa21.28■■□□□ 1
CLPX-203ENST00000558958 ZKSCAN3Q9BRR0 538 aa21.28■■□□□ 1
CLPX-203ENST00000558958 UBAC1Q9BSL1 405 aa21.28■■□□□ 1
CLPX-203ENST00000558958 TBC1D2Q9BYX2 928 aa21.28■■□□□ 1
CLPX-203ENST00000558958 GPHNQ9NQX3 736 aaPredicted RBP21.28■■□□□ 1
CLPX-203ENST00000558958 TCP11L1Q9NUJ3 509 aa21.28■■□□□ 1
CLPX-203ENST00000558958 SH2B2O14492 632 aaPredicted RBP21.27■■□□□ 1
CLPX-203ENST00000558958 IFIT3O14879 490 aaKnown RBP21.27■■□□□ 1
CLPX-203ENST00000558958 POTEIP0CG38 1075 aa21.27■■□□□ 1
CLPX-203ENST00000558958 POTEJP0CG39 1038 aa21.27■■□□□ 1
CLPX-203ENST00000558958 AKR1B1P15121 316 aa21.27■■□□□ 1
CLPX-203ENST00000558958 CERKLQ49MI3 558 aaPredicted RBP21.27■■□□□ 1
CLPX-203ENST00000558958 TMEM67Q5HYA8 995 aa21.27■■□□□ 1
CLPX-203ENST00000558958 BRF1Q92994 677 aa21.27■■□□□ 1
CLPX-203ENST00000558958 ZSCAN10Q96SZ4 725 aaPredicted RBP21.27■■□□□ 1
CLPX-203ENST00000558958 ANGEL1Q9UNK9 670 aaKnown RBP21.27■■□□□ 1
CLPX-203ENST00000558958 PLIN4Q96Q06 1357 aa21.27■■□□□ 1
CLPX-203ENST00000558958 SEC23AQ15436 765 aa21.26■□□□□ 0.99
CLPX-203ENST00000558958 SUPT20HL1Q3ZLR7 823 aa21.26■□□□□ 0.99
CLPX-203ENST00000558958 USP48Q86UV5 1035 aa21.26■□□□□ 0.99
CLPX-203ENST00000558958 HSCBQ8IWL3 235 aa21.26■□□□□ 0.99
CLPX-203ENST00000558958 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.26■□□□□ 0.99
CLPX-203ENST00000558958 LY9Q9HBG7 655 aa21.26■□□□□ 0.99
CLPX-203ENST00000558958 IL17RBQ9NRM6 502 aa21.26■□□□□ 0.99
CLPX-203ENST00000558958 CLEC11AQ9Y240 323 aa21.26■□□□□ 0.99
CLPX-203ENST00000558958 TNKSO95271 1327 aa21.26■□□□□ 0.99
CLPX-203ENST00000558958 ERICH2A1L162 156 aa21.26■□□□□ 0.99
CLPX-203ENST00000558958 NMT2O60551 498 aa21.26■□□□□ 0.99
CLPX-203ENST00000558958 LIFRP42702 1097 aa21.26■□□□□ 0.99
CLPX-203ENST00000558958 RRP1BQ14684 758 aaKnown RBP21.26■□□□□ 0.99
CLPX-203ENST00000558958 DCAF15Q66K64 600 aa21.26■□□□□ 0.99
CLPX-203ENST00000558958 NOL8Q76FK4 1167 aaKnown RBP21.26■□□□□ 0.99
CLPX-203ENST00000558958 CDC37L1Q7L3B6 337 aa21.26■□□□□ 0.99
CLPX-203ENST00000558958 ENAHQ8N8S7 591 aaPredicted RBP21.26■□□□□ 0.99
CLPX-203ENST00000558958 LARP6Q9BRS8 491 aaKnown RBP21.26■□□□□ 0.99
CLPX-203ENST00000558958 LIMCH1Q9UPQ0 1083 aa21.26■□□□□ 0.99
CLPX-203ENST00000558958 MYH8P13535 1937 aa21.25■□□□□ 0.99
CLPX-203ENST00000558958 BECN1Q14457 450 aa21.25■□□□□ 0.99
CLPX-203ENST00000558958 CCDC178Q5BJE1 867 aa21.25■□□□□ 0.99
CLPX-203ENST00000558958 DLK2Q6UY11 383 aa21.25■□□□□ 0.99
CLPX-203ENST00000558958 LDHDQ86WU2 507 aa21.25■□□□□ 0.99
CLPX-203ENST00000558958 IGKV6D-41A0A0C4DH26 115 aa21.24■□□□□ 0.99
CLPX-203ENST00000558958 PHF20L1A8MW92 1017 aa21.24■□□□□ 0.99
CLPX-203ENST00000558958 K7ELQ4 463 aaPredicted RBP21.24■□□□□ 0.99
CLPX-203ENST00000558958 EVCP57679 992 aa21.24■□□□□ 0.99
CLPX-203ENST00000558958 WTAPQ15007 396 aa21.24■□□□□ 0.99
CLPX-203ENST00000558958 SGMS1Q86VZ5 419 aa21.24■□□□□ 0.99
CLPX-203ENST00000558958 TMTC2Q8N394 836 aa21.24■□□□□ 0.99
CLPX-203ENST00000558958 GLIS2Q9BZE0 524 aaPredicted RBP21.24■□□□□ 0.99
CLPX-203ENST00000558958 SENP2Q9HC62 589 aa21.24■□□□□ 0.99
CLPX-203ENST00000558958 TPCN1Q9ULQ1 816 aa21.24■□□□□ 0.99
CLPX-203ENST00000558958 SSC5DA1L4H1 1573 aa21.24■□□□□ 0.99
CLPX-203ENST00000558958 MPHOSPH10O00566 681 aaKnown RBP21.23■□□□□ 0.99
CLPX-203ENST00000558958 GDF11O95390 407 aa21.23■□□□□ 0.99
CLPX-203ENST00000558958 JAG1P78504 1218 aa21.23■□□□□ 0.99
CLPX-203ENST00000558958 APOBRQ0VD83 1088 aa21.23■□□□□ 0.99
CLPX-203ENST00000558958 ABCB5Q2M3G0 1257 aa21.23■□□□□ 0.99
CLPX-203ENST00000558958 RCSD1Q6JBY9 416 aa21.23■□□□□ 0.99
CLPX-203ENST00000558958 DGKHQ86XP1 1220 aa21.23■□□□□ 0.99
CLPX-203ENST00000558958 ANKS1AQ92625 1134 aa21.23■□□□□ 0.99
CLPX-203ENST00000558958 NOVP48745 357 aa21.22■□□□□ 0.99
CLPX-203ENST00000558958 SHROOM1Q2M3G4 852 aaPredicted RBP21.22■□□□□ 0.99
CLPX-203ENST00000558958 MAP1SQ66K74 1059 aaPredicted RBP21.22■□□□□ 0.99
CLPX-203ENST00000558958 TMEM179Q6ZVK1 233 aa21.22■□□□□ 0.99
CLPX-203ENST00000558958 CDCA5Q96FF9 252 aa21.22■□□□□ 0.99
CLPX-203ENST00000558958 CEP95Q96GE4 821 aa21.22■□□□□ 0.99
CLPX-203ENST00000558958 ZSCAN31Q96LW9 406 aaPredicted RBP21.22■□□□□ 0.99
CLPX-203ENST00000558958 ZNF341Q9BYN7 854 aa21.22■□□□□ 0.99
CLPX-203ENST00000558958 ZNF112Q9UJU3 913 aa21.22■□□□□ 0.99
CLPX-203ENST00000558958 BRPF3Q9ULD4 1205 aa21.22■□□□□ 0.99
CLPX-203ENST00000558958 GUCY1A2P33402 732 aa21.21■□□□□ 0.99
CLPX-203ENST00000558958 CAP2P40123 477 aa21.21■□□□□ 0.99
CLPX-203ENST00000558958 IFIT1BQ5T764 474 aaKnown RBP21.21■□□□□ 0.99
CLPX-203ENST00000558958 TMX3Q96JJ7 454 aa21.21■□□□□ 0.99
CLPX-203ENST00000558958 MTMR4Q9NYA4 1195 aa21.21■□□□□ 0.99
CLPX-203ENST00000558958 GREB1LQ9C091 1923 aaPredicted RBP21.21■□□□□ 0.99
CLPX-203ENST00000558958 KLF18A0A0U1RQI7 1052 aa21.2■□□□□ 0.98
CLPX-203ENST00000558958 GH2P01242 217 aa21.2■□□□□ 0.98
CLPX-203ENST00000558958 ME3Q16798 604 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 268.9 ms