RNA–Protein interactions for RNA: ENST00000558943.5

SPG21-208, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-208ENST00000558943 ACEP12821 1306 aa7□□□□□ -1.29
SPG21-208ENST00000558943 ALS2Q96Q42 1657 aa7□□□□□ -1.29
SPG21-208ENST00000558943 TRPM3Q9HCF6 1732 aaPredicted RBP6.99□□□□□ -1.29
SPG21-208ENST00000558943 EPHA1P21709 976 aa6.99□□□□□ -1.29
SPG21-208ENST00000558943 MZF1P28698 734 aaPredicted RBP6.99□□□□□ -1.29
SPG21-208ENST00000558943 FSTL1Q12841 308 aa6.99□□□□□ -1.29
SPG21-208ENST00000558943 NOM1Q5C9Z4 860 aaKnown RBP6.99□□□□□ -1.29
SPG21-208ENST00000558943 KIAA1211Q6ZU35 1233 aa6.99□□□□□ -1.29
SPG21-208ENST00000558943 ARMC10Q8N2F6 343 aa6.99□□□□□ -1.29
SPG21-208ENST00000558943 MYRFLQ96LU7 910 aa6.99□□□□□ -1.29
SPG21-208ENST00000558943 POP1Q99575 1024 aaKnown RBP6.99□□□□□ -1.29
SPG21-208ENST00000558943 CARD10Q9BWT7 1032 aa6.99□□□□□ -1.29
SPG21-208ENST00000558943 TMEM63CQ9P1W3 806 aa6.99□□□□□ -1.29
SPG21-208ENST00000558943 RGPD8O14715 1765 aaPredicted RBP6.99□□□□□ -1.29
SPG21-208ENST00000558943 WDR17Q8IZU2 1322 aa6.99□□□□□ -1.29
SPG21-208ENST00000558943 BRD4O60885 1362 aaPredicted RBP6.98□□□□□ -1.29
SPG21-208ENST00000558943 WISP1O95388 367 aa6.98□□□□□ -1.29
SPG21-208ENST00000558943 CYP2E1P05181 493 aaPredicted RBP6.98□□□□□ -1.29
SPG21-208ENST00000558943 HSPA1AP0DMV8 641 aaKnown RBP6.98□□□□□ -1.29
SPG21-208ENST00000558943 HSPA1BP0DMV9 641 aaKnown RBP6.98□□□□□ -1.29
SPG21-208ENST00000558943 CES1P23141 567 aa6.98□□□□□ -1.29
SPG21-208ENST00000558943 GRIK1P39086 918 aa6.98□□□□□ -1.29
SPG21-208ENST00000558943 ARL4DP49703 201 aa6.98□□□□□ -1.29
SPG21-208ENST00000558943 EHHADHQ08426 723 aa6.98□□□□□ -1.29
SPG21-208ENST00000558943 DBNDD2Q9BQY9 259 aa6.98□□□□□ -1.29
SPG21-208ENST00000558943 RNF208Q9H0X6 261 aa6.98□□□□□ -1.29
SPG21-208ENST00000558943 PEAK1Q9H792 1746 aa6.98□□□□□ -1.29
SPG21-208ENST00000558943 USP19O94966 1318 aa6.98□□□□□ -1.29
SPG21-208ENST00000558943 USP6P35125 1406 aa6.97□□□□□ -1.29
SPG21-208ENST00000558943 USP5P45974 858 aa6.97□□□□□ -1.29
SPG21-208ENST00000558943 NFIAQ12857 509 aa6.97□□□□□ -1.29
SPG21-208ENST00000558943 RNF43Q68DV7 783 aa6.97□□□□□ -1.29
SPG21-208ENST00000558943 TXNDC11Q6PKC3 985 aa6.97□□□□□ -1.29
SPG21-208ENST00000558943 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.97□□□□□ -1.29
SPG21-208ENST00000558943 CLEC10AQ8IUN9 316 aa6.97□□□□□ -1.29
SPG21-208ENST00000558943 TMEM102Q8N9M5 508 aaPredicted RBP6.97□□□□□ -1.29
SPG21-208ENST00000558943 FOXD4L4Q8WXT5 416 aaPredicted RBP6.97□□□□□ -1.29
SPG21-208ENST00000558943 CDK19Q9BWU1 502 aa6.97□□□□□ -1.29
SPG21-208ENST00000558943 NMRK2Q9NPI5 230 aa6.97□□□□□ -1.29
SPG21-208ENST00000558943 DZANK1Q9NVP4 752 aa6.97□□□□□ -1.29
SPG21-208ENST00000558943 KCNK4Q9NYG8 393 aa6.97□□□□□ -1.29
SPG21-208ENST00000558943 IFT172Q9UG01 1749 aa6.97□□□□□ -1.29
SPG21-208ENST00000558943 SEPT3Q9UH03 358 aa6.97□□□□□ -1.29
SPG21-208ENST00000558943 PARP4Q9UKK3 1724 aaKnown RBP6.97□□□□□ -1.29
SPG21-208ENST00000558943 MTMR7Q9Y216 660 aa6.97□□□□□ -1.29
SPG21-208ENST00000558943 PPLO60437 1756 aa6.97□□□□□ -1.29
SPG21-208ENST00000558943 TULP4Q9NRJ4 1543 aa6.96□□□□□ -1.29
SPG21-208ENST00000558943 KNDC1Q76NI1 1749 aa6.96□□□□□ -1.29
SPG21-208ENST00000558943 KRTAP9-6A0A140TA67 174 aa6.96□□□□□ -1.3
SPG21-208ENST00000558943 MEGF11A6BM72 1044 aa6.96□□□□□ -1.3
SPG21-208ENST00000558943 NFKBIEO00221 500 aa6.96□□□□□ -1.3
SPG21-208ENST00000558943 PDE2AO00408 941 aaPredicted RBP6.96□□□□□ -1.3
SPG21-208ENST00000558943 PDGFAP04085 211 aa6.96□□□□□ -1.3
SPG21-208ENST00000558943 NPR3P17342 541 aa6.96□□□□□ -1.3
SPG21-208ENST00000558943 MCTP1Q6DN14 999 aa6.96□□□□□ -1.3
SPG21-208ENST00000558943 COL23A1Q86Y22 540 aaPredicted RBP6.96□□□□□ -1.3
SPG21-208ENST00000558943 ZDHHC13Q8IUH4 622 aa6.96□□□□□ -1.3
SPG21-208ENST00000558943 EDEM1Q92611 657 aa6.96□□□□□ -1.3
SPG21-208ENST00000558943 CNTN3Q9P232 1028 aa6.96□□□□□ -1.3
SPG21-208ENST00000558943 GOLGB1Q14789 3259 aaKnown RBP6.95□□□□□ -1.3
SPG21-208ENST00000558943 SPATA31E1Q6ZUB1 1445 aa6.95□□□□□ -1.3
SPG21-208ENST00000558943 SART1O43290 800 aaKnown RBP6.95□□□□□ -1.3
SPG21-208ENST00000558943 ADAM11O75078 769 aa6.95□□□□□ -1.3
SPG21-208ENST00000558943 EDN3P14138 238 aa6.95□□□□□ -1.3
SPG21-208ENST00000558943 HMGB2P26583 209 aaKnown RBP6.95□□□□□ -1.3
SPG21-208ENST00000558943 SSTR4P31391 388 aa6.95□□□□□ -1.3
SPG21-208ENST00000558943 ARHGAP27Q6ZUM4 889 aa6.95□□□□□ -1.3
SPG21-208ENST00000558943 FAM20CQ8IXL6 584 aa6.95□□□□□ -1.3
SPG21-208ENST00000558943 FLAD1Q8NFF5 587 aa6.95□□□□□ -1.3
SPG21-208ENST00000558943 SYTL4Q96C24 671 aaPredicted RBP6.95□□□□□ -1.3
SPG21-208ENST00000558943 KLHDC7BQ96G42 594 aa6.95□□□□□ -1.3
SPG21-208ENST00000558943 FAM83CQ9BQN1 747 aa6.95□□□□□ -1.3
SPG21-208ENST00000558943 SOX17Q9H6I2 414 aaPredicted RBP6.95□□□□□ -1.3
SPG21-208ENST00000558943 C7orf69Q9H7B7 122 aa6.95□□□□□ -1.3
SPG21-208ENST00000558943 SH2B1Q9NRF2 756 aaPredicted RBP6.95□□□□□ -1.3
SPG21-208ENST00000558943 KANSL3Q9P2N6 904 aa6.95□□□□□ -1.3
SPG21-208ENST00000558943 SOX13Q9UN79 622 aa6.95□□□□□ -1.3
SPG21-208ENST00000558943 IGSF1Q8N6C5 1336 aa6.95□□□□□ -1.3
SPG21-208ENST00000558943 POLR3AO14802 1390 aaPredicted RBP6.95□□□□□ -1.3
SPG21-208ENST00000558943 EIF1AXP47813 144 aaKnown RBP6.94□□□□□ -1.3
SPG21-208ENST00000558943 DNM1Q05193 864 aaKnown RBP6.94□□□□□ -1.3
SPG21-208ENST00000558943 C19orf57Q0VDD7 668 aa6.94□□□□□ -1.3
SPG21-208ENST00000558943 CPSF6Q16630 551 aaKnown RBP eCLIP6.94□□□□□ -1.3
SPG21-208ENST00000558943 ATCAYQ86WG3 371 aa6.94□□□□□ -1.3
SPG21-208ENST00000558943 C1orf127Q8N9H9 656 aa6.94□□□□□ -1.3
SPG21-208ENST00000558943 KCNH5Q8NCM2 988 aa6.94□□□□□ -1.3
SPG21-208ENST00000558943 SNX29Q8TEQ0 813 aa6.94□□□□□ -1.3
SPG21-208ENST00000558943 NLRP2Q9NX02 1062 aa6.94□□□□□ -1.3
SPG21-208ENST00000558943 CCNL1Q9UK58 526 aaPredicted RBP6.94□□□□□ -1.3
SPG21-208ENST00000558943 CCDC7Q96M83 1385 aa6.94□□□□□ -1.3
SPG21-208ENST00000558943 CRYBG1Q9Y4K1 1723 aa6.93□□□□□ -1.3
SPG21-208ENST00000558943 FAM13AO94988 1023 aa6.93□□□□□ -1.3
SPG21-208ENST00000558943 IL2RBP14784 551 aa6.93□□□□□ -1.3
SPG21-208ENST00000558943 C8orf34Q49A92 452 aa6.93□□□□□ -1.3
SPG21-208ENST00000558943 FDX2Q6P4F2 183 aa6.93□□□□□ -1.3
SPG21-208ENST00000558943 ADAMTSL4Q6UY14 1074 aa6.93□□□□□ -1.3
SPG21-208ENST00000558943 SMC1BQ8NDV3 1235 aa6.93□□□□□ -1.3
SPG21-208ENST00000558943 DDX54Q8TDD1 881 aaKnown RBP6.93□□□□□ -1.3
SPG21-208ENST00000558943 UBASH3BQ8TF42 649 aa6.93□□□□□ -1.3
SPG21-208ENST00000558943 BSNDQ8WZ55 320 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms