RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 DIAPH3Q9NSV4 1193 aa14.79□□□□□ -0.04
SMAD3-205ENST00000558428 TSKSQ9UJT2 592 aa14.79□□□□□ -0.04
SMAD3-205ENST00000558428 TESPA1A2RU30 521 aaPredicted RBP14.78□□□□□ -0.04
SMAD3-205ENST00000558428 IGF2BP3O00425 579 aaKnown RBP eCLIP14.78□□□□□ -0.04
SMAD3-205ENST00000558428 ASNSP08243 561 aa14.78□□□□□ -0.04
SMAD3-205ENST00000558428 CETPP11597 493 aa14.78□□□□□ -0.04
SMAD3-205ENST00000558428 SHMT1P34896 483 aa14.78□□□□□ -0.04
SMAD3-205ENST00000558428 CERKLQ49MI3 558 aaPredicted RBP14.78□□□□□ -0.04
SMAD3-205ENST00000558428 OTUD7BQ6GQQ9 843 aa14.78□□□□□ -0.04
SMAD3-205ENST00000558428 SKAP1Q86WV1 359 aa14.78□□□□□ -0.04
SMAD3-205ENST00000558428 IFNL1Q8IU54 200 aa14.78□□□□□ -0.04
SMAD3-205ENST00000558428 IFNL3Q8IZI9 196 aa14.78□□□□□ -0.04
SMAD3-205ENST00000558428 BRI3BPQ8WY22 251 aa14.78□□□□□ -0.04
SMAD3-205ENST00000558428 SAGE1Q9NXZ1 904 aa14.78□□□□□ -0.04
SMAD3-205ENST00000558428 PPP4R2Q9NY27 417 aa14.78□□□□□ -0.04
SMAD3-205ENST00000558428 SWAP70Q9UH65 585 aa14.78□□□□□ -0.04
SMAD3-205ENST00000558428 KCNH4Q9UQ05 1017 aa14.78□□□□□ -0.04
SMAD3-205ENST00000558428 USP17L5A8MUK1 530 aa14.77□□□□□ -0.05
SMAD3-205ENST00000558428 MINDY4BA8MYZ0 360 aa14.77□□□□□ -0.05
SMAD3-205ENST00000558428 SMIM22K7EJ46 135 aa14.77□□□□□ -0.05
SMAD3-205ENST00000558428 HSPA8P11142 646 aaKnown RBP14.77□□□□□ -0.05
SMAD3-205ENST00000558428 JAG1P78504 1218 aa14.77□□□□□ -0.05
SMAD3-205ENST00000558428 SHROOM1Q2M3G4 852 aaPredicted RBP14.77□□□□□ -0.05
SMAD3-205ENST00000558428 SBK1Q52WX2 424 aa14.77□□□□□ -0.05
SMAD3-205ENST00000558428 CWC27Q6UX04 472 aaKnown RBP14.77□□□□□ -0.05
SMAD3-205ENST00000558428 ZNF589Q86UQ0 364 aaPredicted RBP14.77□□□□□ -0.05
SMAD3-205ENST00000558428 SLC44A5Q8NCS7 719 aa14.77□□□□□ -0.05
SMAD3-205ENST00000558428 PTPN18Q99952 460 aa14.77□□□□□ -0.05
SMAD3-205ENST00000558428 TBC1D2Q9BYX2 928 aa14.77□□□□□ -0.05
SMAD3-205ENST00000558428 NAPBQ9H115 298 aa14.77□□□□□ -0.05
SMAD3-205ENST00000558428 GINM1Q9NU53 330 aa14.77□□□□□ -0.05
SMAD3-205ENST00000558428 ZBTB21Q9ULJ3 1066 aa14.77□□□□□ -0.05
SMAD3-205ENST00000558428 AFG3L2Q9Y4W6 797 aa14.77□□□□□ -0.05
SMAD3-205ENST00000558428 CCDC171Q6TFL3 1326 aa14.76□□□□□ -0.05
SMAD3-205ENST00000558428 TRIM75PA6NK02 468 aa14.76□□□□□ -0.05
SMAD3-205ENST00000558428 CXCL11O14625 94 aa14.76□□□□□ -0.05
SMAD3-205ENST00000558428 ALDH1A1P00352 501 aa14.76□□□□□ -0.05
SMAD3-205ENST00000558428 GH2P01242 217 aa14.76□□□□□ -0.05
SMAD3-205ENST00000558428 CDK8P49336 464 aa14.76□□□□□ -0.05
SMAD3-205ENST00000558428 LBX1P52954 281 aa14.76□□□□□ -0.05
SMAD3-205ENST00000558428 ABCB5Q2M3G0 1257 aa14.76□□□□□ -0.05
SMAD3-205ENST00000558428 VPS53Q5VIR6 699 aa14.76□□□□□ -0.05
SMAD3-205ENST00000558428 C16orf86Q6ZW13 317 aa14.76□□□□□ -0.05
SMAD3-205ENST00000558428 AS3MTQ9HBK9 375 aa14.76□□□□□ -0.05
SMAD3-205ENST00000558428 CABP5Q9NP86 173 aa14.76□□□□□ -0.05
SMAD3-205ENST00000558428 TAOK2Q9UL54 1235 aa14.76□□□□□ -0.05
SMAD3-205ENST00000558428 CASP8AP2Q9UKL3 1982 aa14.76□□□□□ -0.05
SMAD3-205ENST00000558428 A0A0G2JLL6 359 aaPredicted RBP14.75□□□□□ -0.05
SMAD3-205ENST00000558428 FOXP2O15409 715 aa14.75□□□□□ -0.05
SMAD3-205ENST00000558428 MFAP1P55081 439 aaKnown RBP14.75□□□□□ -0.05
SMAD3-205ENST00000558428 SPP2Q13103 211 aa14.75□□□□□ -0.05
SMAD3-205ENST00000558428 PRRT2Q7Z6L0 340 aaPredicted RBP14.75□□□□□ -0.05
SMAD3-205ENST00000558428 STK11IPQ8N1F8 1099 aa14.75□□□□□ -0.05
SMAD3-205ENST00000558428 FAM43AQ8N2R8 423 aa14.75□□□□□ -0.05
SMAD3-205ENST00000558428 ZNF280CQ8ND82 737 aa14.75□□□□□ -0.05
SMAD3-205ENST00000558428 BTBD19C9JJ37 291 aa14.74□□□□□ -0.05
SMAD3-205ENST00000558428 MPHOSPH10O00566 681 aaKnown RBP14.74□□□□□ -0.05
SMAD3-205ENST00000558428 TBC1D8O95759 1140 aa14.74□□□□□ -0.05
SMAD3-205ENST00000558428 RAB3GAP1Q15042 981 aa14.74□□□□□ -0.05
SMAD3-205ENST00000558428 GADL1Q6ZQY3 521 aa14.74□□□□□ -0.05
SMAD3-205ENST00000558428 ROBO3Q96MS0 1386 aa14.73□□□□□ -0.05
SMAD3-205ENST00000558428 HSPD1P10809 573 aaKnown RBP14.73□□□□□ -0.05
SMAD3-205ENST00000558428 PPARAQ07869 468 aa14.73□□□□□ -0.05
SMAD3-205ENST00000558428 MOGSQ13724 837 aa14.73□□□□□ -0.05
SMAD3-205ENST00000558428 TAF1CQ15572 869 aaPredicted RBP14.73□□□□□ -0.05
SMAD3-205ENST00000558428 FASTKD5Q7L8L6 764 aaKnown RBP14.73□□□□□ -0.05
SMAD3-205ENST00000558428 CCDC17Q96LX7 622 aa14.73□□□□□ -0.05
SMAD3-205ENST00000558428 WDR18Q9BV38 432 aa14.73□□□□□ -0.05
SMAD3-205ENST00000558428 MKNK2Q9HBH9 465 aa14.73□□□□□ -0.05
SMAD3-205ENST00000558428 SLC3A2P08195 630 aaKnown RBP14.72□□□□□ -0.05
SMAD3-205ENST00000558428 AKR1B1P15121 316 aa14.72□□□□□ -0.05
SMAD3-205ENST00000558428 CHMLP26374 656 aa14.72□□□□□ -0.05
SMAD3-205ENST00000558428 GUCY1A2P33402 732 aa14.72□□□□□ -0.05
SMAD3-205ENST00000558428 HMGCS2P54868 508 aa14.72□□□□□ -0.05
SMAD3-205ENST00000558428 MTMR2Q13614 643 aa14.72□□□□□ -0.05
SMAD3-205ENST00000558428 SEPT2Q15019 361 aa14.72□□□□□ -0.05
SMAD3-205ENST00000558428 ALX1Q15699 326 aa14.72□□□□□ -0.05
SMAD3-205ENST00000558428 TMEM179Q6ZVK1 233 aa14.72□□□□□ -0.05
SMAD3-205ENST00000558428 ANKRD23Q86SG2 305 aa14.72□□□□□ -0.05
SMAD3-205ENST00000558428 RUFY2Q8WXA3 655 aa14.72□□□□□ -0.05
SMAD3-205ENST00000558428 CFHR5Q9BXR6 569 aa14.72□□□□□ -0.05
SMAD3-205ENST00000558428 ZNF287Q9HBT7 754 aa14.72□□□□□ -0.05
SMAD3-205ENST00000558428 ZCCHC17Q9NP64 241 aaKnown RBP14.72□□□□□ -0.05
SMAD3-205ENST00000558428 PRDM10Q9NQV6 1147 aa14.72□□□□□ -0.05
SMAD3-205ENST00000558428 LOC285556D6RIA3 1793 aa14.72□□□□□ -0.05
SMAD3-205ENST00000558428 RAD50Q92878 1312 aa14.71□□□□□ -0.05
SMAD3-205ENST00000558428 USP17L10C9JJH3 530 aa14.71□□□□□ -0.05
SMAD3-205ENST00000558428 PDHXO00330 501 aa14.71□□□□□ -0.05
SMAD3-205ENST00000558428 FGAP02671 866 aa14.71□□□□□ -0.05
SMAD3-205ENST00000558428 RASA1P20936 1047 aa14.71□□□□□ -0.05
SMAD3-205ENST00000558428 BACE1P56817 501 aa14.71□□□□□ -0.05
SMAD3-205ENST00000558428 PDE4BQ07343 736 aa14.71□□□□□ -0.05
SMAD3-205ENST00000558428 CRHR2Q13324 411 aa14.71□□□□□ -0.05
SMAD3-205ENST00000558428 BMP2KLQ5H9B9 411 aa14.71□□□□□ -0.05
SMAD3-205ENST00000558428 GPAT2Q6NUI2 795 aa14.71□□□□□ -0.05
SMAD3-205ENST00000558428 FEZ1Q99689 392 aa14.71□□□□□ -0.05
SMAD3-205ENST00000558428 R3HDMLQ9H3Y0 253 aa14.71□□□□□ -0.05
SMAD3-205ENST00000558428 ZFYVE28Q9HCC9 887 aa14.71□□□□□ -0.05
SMAD3-205ENST00000558428 ZMYM6O95789 1325 aa14.7□□□□□ -0.06
SMAD3-205ENST00000558428 C19orf81C9J6K1 198 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms