RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 KAZALD1Q96I82 304 aa5.75□□□□□ -1.49
HMG20A-204ENST00000558288 NAPGQ99747 312 aaPredicted RBP5.75□□□□□ -1.49
HMG20A-204ENST00000558288 CRACR2AQ9BSW2 395 aa5.75□□□□□ -1.49
HMG20A-204ENST00000558288 TUBE1Q9UJT0 475 aa5.75□□□□□ -1.49
HMG20A-204ENST00000558288 KCNH3Q9ULD8 1083 aa5.75□□□□□ -1.49
HMG20A-204ENST00000558288 SALL1Q9NSC2 1324 aa5.75□□□□□ -1.49
HMG20A-204ENST00000558288 TRPM3Q9HCF6 1732 aaPredicted RBP5.75□□□□□ -1.49
HMG20A-204ENST00000558288 RPS6KA5O75582 802 aa5.75□□□□□ -1.49
HMG20A-204ENST00000558288 MAP2K2P36507 400 aa5.75□□□□□ -1.49
HMG20A-204ENST00000558288 USP5P45974 858 aa5.75□□□□□ -1.49
HMG20A-204ENST00000558288 EIF5P55010 431 aaKnown RBP5.75□□□□□ -1.49
HMG20A-204ENST00000558288 EXOSC10Q01780 885 aaKnown RBP5.75□□□□□ -1.49
HMG20A-204ENST00000558288 KIF23Q02241 960 aaPredicted RBP5.75□□□□□ -1.49
HMG20A-204ENST00000558288 SLC39A14Q15043 492 aa5.75□□□□□ -1.49
HMG20A-204ENST00000558288 RAD9BQ6WBX8 426 aa5.75□□□□□ -1.49
HMG20A-204ENST00000558288 RALYLQ86SE5 291 aaKnown RBP5.75□□□□□ -1.49
HMG20A-204ENST00000558288 METTL16Q86W50 562 aaKnown RBP5.75□□□□□ -1.49
HMG20A-204ENST00000558288 CCDC24Q8N4L8 307 aa5.75□□□□□ -1.49
HMG20A-204ENST00000558288 MSANTD4Q8NCY6 345 aa5.75□□□□□ -1.49
HMG20A-204ENST00000558288 AIFM3Q96NN9 605 aa5.75□□□□□ -1.49
HMG20A-204ENST00000558288 FAM107BQ9H098 131 aa5.75□□□□□ -1.49
HMG20A-204ENST00000558288 SAMSN1Q9NSI8 373 aaKnown RBP5.75□□□□□ -1.49
HMG20A-204ENST00000558288 DACH1Q9UI36 760 aa5.75□□□□□ -1.49
HMG20A-204ENST00000558288 RAB21Q9UL25 225 aa5.75□□□□□ -1.49
HMG20A-204ENST00000558288 ADGRG1Q9Y653 693 aa5.75□□□□□ -1.49
HMG20A-204ENST00000558288 ABCA3Q99758 1704 aa5.74□□□□□ -1.49
HMG20A-204ENST00000558288 PHRF1Q9P1Y6 1649 aaKnown RBP5.74□□□□□ -1.49
HMG20A-204ENST00000558288 EBAG9O00559 213 aa5.74□□□□□ -1.49
HMG20A-204ENST00000558288 CYP27B1O15528 508 aa5.74□□□□□ -1.49
HMG20A-204ENST00000558288 PRC1O43663 620 aa5.74□□□□□ -1.49
HMG20A-204ENST00000558288 HOXB7P09629 217 aa5.74□□□□□ -1.49
HMG20A-204ENST00000558288 HSPD1P10809 573 aaKnown RBP5.74□□□□□ -1.49
HMG20A-204ENST00000558288 RXRAP19793 462 aa5.74□□□□□ -1.49
HMG20A-204ENST00000558288 STX17P56962 302 aa5.74□□□□□ -1.49
HMG20A-204ENST00000558288 HTRA3P83110 453 aa5.74□□□□□ -1.49
HMG20A-204ENST00000558288 FMR1Q06787 632 aaKnown RBP eCLIP5.74□□□□□ -1.49
HMG20A-204ENST00000558288 RBL2Q08999 1139 aa5.74□□□□□ -1.49
HMG20A-204ENST00000558288 TRDNQ13061 729 aa5.74□□□□□ -1.49
HMG20A-204ENST00000558288 TBX2Q13207 712 aaPredicted RBP5.74□□□□□ -1.49
HMG20A-204ENST00000558288 TRIM29Q14134 588 aa5.74□□□□□ -1.49
HMG20A-204ENST00000558288 WASHC4Q2M389 1173 aa5.74□□□□□ -1.49
HMG20A-204ENST00000558288 PLEKHO1Q53GL0 409 aaPredicted RBP5.74□□□□□ -1.49
HMG20A-204ENST00000558288 KBTBD3Q8NAB2 608 aa5.74□□□□□ -1.49
HMG20A-204ENST00000558288 NOA1Q8NC60 698 aaKnown RBP5.74□□□□□ -1.49
HMG20A-204ENST00000558288 ACRBPQ8NEB7 543 aa5.74□□□□□ -1.49
HMG20A-204ENST00000558288 MYD88Q99836 296 aa5.74□□□□□ -1.49
HMG20A-204ENST00000558288 ALG1Q9BT22 464 aa5.74□□□□□ -1.49
HMG20A-204ENST00000558288 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.74□□□□□ -1.49
HMG20A-204ENST00000558288 NRAPQ86VF7 1730 aa5.74□□□□□ -1.49
HMG20A-204ENST00000558288 USP31Q70CQ4 1352 aa5.74□□□□□ -1.49
HMG20A-204ENST00000558288 MYO1BO43795 1136 aa5.74□□□□□ -1.49
HMG20A-204ENST00000558288 ZMYND10O75800 440 aa5.74□□□□□ -1.49
HMG20A-204ENST00000558288 IBSPP21815 317 aaPredicted RBP5.74□□□□□ -1.49
HMG20A-204ENST00000558288 USP8P40818 1118 aa5.74□□□□□ -1.49
HMG20A-204ENST00000558288 MAP9Q49MG5 647 aa5.74□□□□□ -1.49
HMG20A-204ENST00000558288 TTC39AQ5SRH9 613 aa5.74□□□□□ -1.49
HMG20A-204ENST00000558288 FBXW10Q5XX13 1052 aa5.74□□□□□ -1.49
HMG20A-204ENST00000558288 VPS37DQ86XT2 251 aa5.74□□□□□ -1.49
HMG20A-204ENST00000558288 CAGE1Q8TC20 777 aa5.74□□□□□ -1.49
HMG20A-204ENST00000558288 ZNF622Q969S3 477 aaKnown RBP eCLIP5.74□□□□□ -1.49
HMG20A-204ENST00000558288 CXorf56Q9H5V9 222 aa5.74□□□□□ -1.49
HMG20A-204ENST00000558288 CCDC87Q9NVE4 849 aa5.74□□□□□ -1.49
HMG20A-204ENST00000558288 PAG1Q9NWQ8 432 aa5.74□□□□□ -1.49
HMG20A-204ENST00000558288 MAN1B1Q9UKM7 699 aa5.74□□□□□ -1.49
HMG20A-204ENST00000558288 MYH15Q9Y2K3 1946 aa5.74□□□□□ -1.49
HMG20A-204ENST00000558288 SHTN1A0MZ66 631 aa5.73□□□□□ -1.49
HMG20A-204ENST00000558288 TEX33O43247 280 aa5.73□□□□□ -1.49
HMG20A-204ENST00000558288 HMGB2P26583 209 aaKnown RBP5.73□□□□□ -1.49
HMG20A-204ENST00000558288 STIM1Q13586 685 aa5.73□□□□□ -1.49
HMG20A-204ENST00000558288 FILIP1LQ4L180 1135 aa5.73□□□□□ -1.49
HMG20A-204ENST00000558288 EPHA10Q5JZY3 1008 aa5.73□□□□□ -1.49
HMG20A-204ENST00000558288 TTC19Q6DKK2 380 aaPredicted RBP5.73□□□□□ -1.49
HMG20A-204ENST00000558288 GRAMD1CQ8IYS0 662 aa5.73□□□□□ -1.49
HMG20A-204ENST00000558288 TTC5Q8N0Z6 440 aa5.73□□□□□ -1.49
HMG20A-204ENST00000558288 BANK1Q8NDB2 785 aa5.73□□□□□ -1.49
HMG20A-204ENST00000558288 CTCFLQ8NI51 663 aaPredicted RBP5.73□□□□□ -1.49
HMG20A-204ENST00000558288 FAM76AQ8TAV0 307 aa5.73□□□□□ -1.49
HMG20A-204ENST00000558288 AKT1S1Q96B36 256 aa5.73□□□□□ -1.49
HMG20A-204ENST00000558288 CAPZA3Q96KX2 299 aa5.73□□□□□ -1.49
HMG20A-204ENST00000558288 HAUS7Q99871 368 aa5.73□□□□□ -1.49
HMG20A-204ENST00000558288 HINFPQ9BQA5 517 aa5.73□□□□□ -1.49
HMG20A-204ENST00000558288 RNF181Q9P0P0 153 aa5.73□□□□□ -1.49
HMG20A-204ENST00000558288 ABCC6O95255 1503 aa5.73□□□□□ -1.49
HMG20A-204ENST00000558288 AKAP12Q02952 1782 aa5.73□□□□□ -1.49
HMG20A-204ENST00000558288 POLR2DO15514 142 aaKnown RBP5.73□□□□□ -1.49
HMG20A-204ENST00000558288 PRR29P0C7W0 189 aa5.73□□□□□ -1.49
HMG20A-204ENST00000558288 CASP14P31944 242 aa5.73□□□□□ -1.49
HMG20A-204ENST00000558288 TUBB4BP68371 445 aa5.73□□□□□ -1.49
HMG20A-204ENST00000558288 FKBP4Q02790 459 aaKnown RBP eCLIP5.73□□□□□ -1.49
HMG20A-204ENST00000558288 POSTNQ15063 836 aa5.73□□□□□ -1.49
HMG20A-204ENST00000558288 IMMTQ16891 758 aaKnown RBP5.73□□□□□ -1.49
HMG20A-204ENST00000558288 WHAMMP3Q1A5X7 153 aa5.73□□□□□ -1.49
HMG20A-204ENST00000558288 HSP90AB3PQ58FF7 597 aa5.73□□□□□ -1.49
HMG20A-204ENST00000558288 EP400NLQ6ZTU2 488 aa5.73□□□□□ -1.49
HMG20A-204ENST00000558288 FOXP4Q8IVH2 680 aaPredicted RBP5.73□□□□□ -1.49
HMG20A-204ENST00000558288 GSPT2Q8IYD1 628 aaKnown RBP5.73□□□□□ -1.49
HMG20A-204ENST00000558288 DSCC1Q9BVC3 393 aa5.73□□□□□ -1.49
HMG20A-204ENST00000558288 TEX13AQ9BXU3 409 aaPredicted RBP5.73□□□□□ -1.49
HMG20A-204ENST00000558288 MYO6Q9UM54 1294 aa5.73□□□□□ -1.49
HMG20A-204ENST00000558288 GUCA1BQ9UMX6 200 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms