RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 OXCT1P55809 520 aa12.37□□□□□ -0.43
SEMA4B-204ENST00000558065 ANKRD20A8PQ5CZ79 823 aa12.37□□□□□ -0.43
SEMA4B-204ENST00000558065 EXOC3L1Q86VI1 746 aa12.37□□□□□ -0.43
SEMA4B-204ENST00000558065 LSM14AQ8ND56 463 aaKnown RBP12.37□□□□□ -0.43
SEMA4B-204ENST00000558065 OTUD7AQ8TE49 926 aaPredicted RBP12.37□□□□□ -0.43
SEMA4B-204ENST00000558065 IRF2BPLQ9H1B7 796 aa12.37□□□□□ -0.43
SEMA4B-204ENST00000558065 GOLGA6L9A6NEM1 432 aa12.37□□□□□ -0.43
SEMA4B-204ENST00000558065 ZBTB7BO15156 539 aaPredicted RBP12.37□□□□□ -0.43
SEMA4B-204ENST00000558065 STX1AQ16623 288 aa12.37□□□□□ -0.43
SEMA4B-204ENST00000558065 WHAMMP3Q1A5X7 153 aa12.37□□□□□ -0.43
SEMA4B-204ENST00000558065 CACTIN-AS1Q8N1I8 211 aa12.37□□□□□ -0.43
SEMA4B-204ENST00000558065 OPTNQ96CV9 577 aa12.37□□□□□ -0.43
SEMA4B-204ENST00000558065 RNF17Q9BXT8 1623 aaKnown RBP12.37□□□□□ -0.43
SEMA4B-204ENST00000558065 CEP104O60308 925 aa12.37□□□□□ -0.43
SEMA4B-204ENST00000558065 CCDC175P0C221 793 aa12.37□□□□□ -0.43
SEMA4B-204ENST00000558065 PTK7Q13308 1070 aa12.37□□□□□ -0.43
SEMA4B-204ENST00000558065 NACC2Q96BF6 587 aa12.37□□□□□ -0.43
SEMA4B-204ENST00000558065 FAM167BQ9BTA0 163 aa12.37□□□□□ -0.43
SEMA4B-204ENST00000558065 LNPEPQ9UIQ6 1025 aa12.37□□□□□ -0.43
SEMA4B-204ENST00000558065 PRAG1Q86YV5 1406 aa12.36□□□□□ -0.43
SEMA4B-204ENST00000558065 A0A087WWV3 80 aa12.36□□□□□ -0.43
SEMA4B-204ENST00000558065 TFRCP02786 760 aaKnown RBP12.36□□□□□ -0.43
SEMA4B-204ENST00000558065 TUBBP07437 444 aa12.36□□□□□ -0.43
SEMA4B-204ENST00000558065 CEBPZQ03701 1054 aaKnown RBP12.36□□□□□ -0.43
SEMA4B-204ENST00000558065 CCDC38Q502W7 563 aa12.36□□□□□ -0.43
SEMA4B-204ENST00000558065 CCDC65Q8IXS2 484 aa12.36□□□□□ -0.43
SEMA4B-204ENST00000558065 LRRCC1Q9C099 1032 aa12.36□□□□□ -0.43
SEMA4B-204ENST00000558065 CDC23Q9UJX2 597 aa12.36□□□□□ -0.43
SEMA4B-204ENST00000558065 NPHP4O75161 1426 aaPredicted RBP12.36□□□□□ -0.43
SEMA4B-204ENST00000558065 N4BP3O15049 544 aa12.36□□□□□ -0.43
SEMA4B-204ENST00000558065 ATP9BO43861 1147 aa12.36□□□□□ -0.43
SEMA4B-204ENST00000558065 TUBB4BP68371 445 aa12.36□□□□□ -0.43
SEMA4B-204ENST00000558065 ADAM9Q13443 819 aa12.36□□□□□ -0.43
SEMA4B-204ENST00000558065 TCP11L2Q8N4U5 519 aa12.36□□□□□ -0.43
SEMA4B-204ENST00000558065 BAIAP2L1Q9UHR4 511 aa12.36□□□□□ -0.43
SEMA4B-204ENST00000558065 IKBKBO14920 756 aa12.35□□□□□ -0.43
SEMA4B-204ENST00000558065 HDLBPQ00341 1268 aaKnown RBP12.35□□□□□ -0.43
SEMA4B-204ENST00000558065 AOPEPQ8N6M6 819 aa12.35□□□□□ -0.43
SEMA4B-204ENST00000558065 CCDC12Q8WUD4 166 aaPredicted RBP12.35□□□□□ -0.43
SEMA4B-204ENST00000558065 EPN3Q9H201 632 aa12.35□□□□□ -0.43
SEMA4B-204ENST00000558065 ADCY9O60503 1353 aa12.35□□□□□ -0.43
SEMA4B-204ENST00000558065 STXBP3O00186 592 aa12.35□□□□□ -0.43
SEMA4B-204ENST00000558065 DIAPH2O60879 1101 aa12.35□□□□□ -0.43
SEMA4B-204ENST00000558065 TPPPO94811 219 aa12.35□□□□□ -0.43
SEMA4B-204ENST00000558065 SCTRP47872 440 aa12.35□□□□□ -0.43
SEMA4B-204ENST00000558065 KLHL10Q6JEL2 608 aa12.35□□□□□ -0.43
SEMA4B-204ENST00000558065 C14orf80Q86SX3 495 aa12.35□□□□□ -0.43
SEMA4B-204ENST00000558065 ERICH1Q86X53 443 aa12.35□□□□□ -0.43
SEMA4B-204ENST00000558065 IFNKQ9P0W0 207 aa12.35□□□□□ -0.43
SEMA4B-204ENST00000558065 TMCO1Q9UM00 188 aa12.35□□□□□ -0.43
SEMA4B-204ENST00000558065 FAM135BQ49AJ0 1406 aa12.35□□□□□ -0.43
SEMA4B-204ENST00000558065 NDUFB5O43674 189 aa12.35□□□□□ -0.43
SEMA4B-204ENST00000558065 YY1P25490 414 aa12.35□□□□□ -0.43
SEMA4B-204ENST00000558065 APLFQ8IW19 511 aaPredicted RBP12.35□□□□□ -0.43
SEMA4B-204ENST00000558065 ANKK1Q8NFD2 765 aa12.35□□□□□ -0.43
SEMA4B-204ENST00000558065 NDNQ99608 321 aa12.35□□□□□ -0.43
SEMA4B-204ENST00000558065 HELLSQ9NRZ9 838 aa12.35□□□□□ -0.43
SEMA4B-204ENST00000558065 DNMT1P26358 1616 aaKnown RBP12.35□□□□□ -0.43
SEMA4B-204ENST00000558065 LSM1O15116 133 aaKnown RBP12.34□□□□□ -0.43
SEMA4B-204ENST00000558065 LUC7L3O95232 432 aaKnown RBP12.34□□□□□ -0.43
SEMA4B-204ENST00000558065 MXRA7P84157 204 aa12.34□□□□□ -0.43
SEMA4B-204ENST00000558065 NUP160Q12769 1436 aa12.34□□□□□ -0.43
SEMA4B-204ENST00000558065 TROQ12816 1431 aaPredicted RBP12.34□□□□□ -0.43
SEMA4B-204ENST00000558065 PI16Q6UXB8 463 aa12.34□□□□□ -0.43
SEMA4B-204ENST00000558065 CNBD1Q8NA66 436 aa12.34□□□□□ -0.43
SEMA4B-204ENST00000558065 NOA1Q8NC60 698 aaKnown RBP12.34□□□□□ -0.43
SEMA4B-204ENST00000558065 NOP53Q9NZM5 478 aaKnown RBP12.34□□□□□ -0.43
SEMA4B-204ENST00000558065 DAPK1P53355 1430 aa12.34□□□□□ -0.43
SEMA4B-204ENST00000558065 EIF4E1BA6NMX2 242 aaKnown RBP12.34□□□□□ -0.43
SEMA4B-204ENST00000558065 DNAJC8O75937 253 aaPredicted RBP12.34□□□□□ -0.43
SEMA4B-204ENST00000558065 HOXD12P35452 270 aa12.34□□□□□ -0.43
SEMA4B-204ENST00000558065 KRT85P78386 507 aa12.34□□□□□ -0.43
SEMA4B-204ENST00000558065 RIPK1Q13546 671 aa12.34□□□□□ -0.43
SEMA4B-204ENST00000558065 WHAMMQ8TF30 809 aa12.34□□□□□ -0.43
SEMA4B-204ENST00000558065 TIMM22Q9Y584 194 aa12.34□□□□□ -0.43
SEMA4B-204ENST00000558065 STK24Q9Y6E0 443 aa12.34□□□□□ -0.43
SEMA4B-204ENST00000558065 IQGAP2Q13576 1575 aa12.34□□□□□ -0.43
SEMA4B-204ENST00000558065 PFKFB2O60825 505 aa12.34□□□□□ -0.43
SEMA4B-204ENST00000558065 LSP1P33241 339 aa12.34□□□□□ -0.43
SEMA4B-204ENST00000558065 MAMSTRQ6ZN01 415 aa12.34□□□□□ -0.43
SEMA4B-204ENST00000558065 NANOGNBQ7Z5D8 188 aa12.34□□□□□ -0.43
SEMA4B-204ENST00000558065 PALB2Q86YC2 1186 aa12.34□□□□□ -0.43
SEMA4B-204ENST00000558065 IWS1Q96ST2 819 aa12.34□□□□□ -0.43
SEMA4B-204ENST00000558065 INIPQ9NRY2 104 aa12.34□□□□□ -0.43
SEMA4B-204ENST00000558065 ARHGEF5Q12774 1597 aa12.34□□□□□ -0.43
SEMA4B-204ENST00000558065 LRRD1A4D1F6 860 aa12.33□□□□□ -0.43
SEMA4B-204ENST00000558065 A6NNZ2 444 aa12.33□□□□□ -0.43
SEMA4B-204ENST00000558065 STAT6P42226 847 aa12.33□□□□□ -0.43
SEMA4B-204ENST00000558065 TUBB8Q3ZCM7 444 aa12.33□□□□□ -0.43
SEMA4B-204ENST00000558065 SOGA3Q5TF21 947 aa12.33□□□□□ -0.43
SEMA4B-204ENST00000558065 MYCBPAPQ8TBZ2 947 aa12.33□□□□□ -0.43
SEMA4B-204ENST00000558065 AGAP11Q8TF27 550 aa12.33□□□□□ -0.43
SEMA4B-204ENST00000558065 IFT43Q96FT9 208 aa12.33□□□□□ -0.43
SEMA4B-204ENST00000558065 RHBDL2Q9NX52 303 aa12.33□□□□□ -0.43
SEMA4B-204ENST00000558065 EFR3BQ9Y2G0 817 aa12.33□□□□□ -0.43
SEMA4B-204ENST00000558065 APBB1O00213 710 aa12.33□□□□□ -0.44
SEMA4B-204ENST00000558065 VDRP11473 427 aa12.33□□□□□ -0.44
SEMA4B-204ENST00000558065 LACTB2Q53H82 288 aaPredicted RBP12.33□□□□□ -0.44
SEMA4B-204ENST00000558065 CCDC121Q6ZUS5 278 aa12.33□□□□□ -0.44
SEMA4B-204ENST00000558065 CCAR1Q8IX12 1150 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms