RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 TMTC2Q8N394 836 aa23.87■■□□□ 1.41
SNRPA1-205ENST00000558036 IL17RBQ9NRM6 502 aa23.87■■□□□ 1.41
SNRPA1-205ENST00000558036 F13A1P00488 732 aa23.86■■□□□ 1.41
SNRPA1-205ENST00000558036 HMGN5P82970 282 aaKnown RBP23.86■■□□□ 1.41
SNRPA1-205ENST00000558036 ZNF444Q8N0Y2 327 aaPredicted RBP23.86■■□□□ 1.41
SNRPA1-205ENST00000558036 FAM198AQ9UFP1 575 aa23.86■■□□□ 1.41
SNRPA1-205ENST00000558036 TSPY3P0CV98 308 aa23.86■■□□□ 1.41
SNRPA1-205ENST00000558036 TSPY8P0CW00 308 aa23.86■■□□□ 1.41
SNRPA1-205ENST00000558036 PHKBQ93100 1093 aa23.86■■□□□ 1.41
SNRPA1-205ENST00000558036 FOCADQ5VW36 1801 aa23.86■■□□□ 1.41
SNRPA1-205ENST00000558036 CMTR1Q8N1G2 835 aaKnown RBP23.85■■□□□ 1.41
SNRPA1-205ENST00000558036 OGFOD1Q8N543 542 aa23.85■■□□□ 1.41
SNRPA1-205ENST00000558036 MYH1P12882 1939 aa23.85■■□□□ 1.41
SNRPA1-205ENST00000558036 PSME4Q14997 1843 aa23.85■■□□□ 1.41
SNRPA1-205ENST00000558036 CIAPIN1Q6FI81 312 aa23.84■■□□□ 1.41
SNRPA1-205ENST00000558036 TTC6Q86TZ1 520 aa23.84■■□□□ 1.41
SNRPA1-205ENST00000558036 TAOK2Q9UL54 1235 aa23.84■■□□□ 1.41
SNRPA1-205ENST00000558036 SHTN1A0MZ66 631 aa23.84■■□□□ 1.41
SNRPA1-205ENST00000558036 RCSD1Q6JBY9 416 aa23.84■■□□□ 1.41
SNRPA1-205ENST00000558036 DDX11L8A8MPP1 907 aa23.83■■□□□ 1.41
SNRPA1-205ENST00000558036 NTRK3Q16288 839 aa23.83■■□□□ 1.41
SNRPA1-205ENST00000558036 CCDC82Q8N4S0 544 aa23.83■■□□□ 1.41
SNRPA1-205ENST00000558036 CHMP4CQ96CF2 233 aa23.83■■□□□ 1.41
SNRPA1-205ENST00000558036 ZNF287Q9HBT7 754 aa23.83■■□□□ 1.41
SNRPA1-205ENST00000558036 ORC3Q9UBD5 711 aaPredicted RBP23.83■■□□□ 1.41
SNRPA1-205ENST00000558036 CLRN2A0PK11 232 aa23.83■■□□□ 1.4
SNRPA1-205ENST00000558036 SPDYE2BA6NHP3 402 aa23.83■■□□□ 1.4
SNRPA1-205ENST00000558036 H3BQV1 296 aa23.83■■□□□ 1.4
SNRPA1-205ENST00000558036 SPDYE6P0CI01 402 aa23.83■■□□□ 1.4
SNRPA1-205ENST00000558036 GUCY1B3Q02153 619 aa23.83■■□□□ 1.4
SNRPA1-205ENST00000558036 GABPAQ06546 454 aa23.83■■□□□ 1.4
SNRPA1-205ENST00000558036 RTN1Q16799 776 aa23.83■■□□□ 1.4
SNRPA1-205ENST00000558036 IFFO2Q5TF58 517 aa23.83■■□□□ 1.4
SNRPA1-205ENST00000558036 FANCBQ8NB91 859 aa23.83■■□□□ 1.4
SNRPA1-205ENST00000558036 IDI2Q9BXS1 227 aa23.83■■□□□ 1.4
SNRPA1-205ENST00000558036 HDAC9Q9UKV0 1011 aa23.83■■□□□ 1.4
SNRPA1-205ENST00000558036 LTBP3Q9NS15 1303 aa23.82■■□□□ 1.4
SNRPA1-205ENST00000558036 DDTLA6NHG4 134 aaPredicted RBP23.82■■□□□ 1.4
SNRPA1-205ENST00000558036 UBE2Q2LH0YL09 131 aa23.82■■□□□ 1.4
SNRPA1-205ENST00000558036 CATIPQ7Z7H3 387 aa23.82■■□□□ 1.4
SNRPA1-205ENST00000558036 AGBL3Q8NEM8 1001 aa23.82■■□□□ 1.4
SNRPA1-205ENST00000558036 GJB4Q9NTQ9 266 aa23.82■■□□□ 1.4
SNRPA1-205ENST00000558036 SERPINB13Q9UIV8 391 aa23.82■■□□□ 1.4
SNRPA1-205ENST00000558036 DLGAP5Q15398 846 aa23.81■■□□□ 1.4
SNRPA1-205ENST00000558036 SH3BP5LQ7L8J4 393 aa23.81■■□□□ 1.4
SNRPA1-205ENST00000558036 ZSCAN29Q8IWY8 852 aaPredicted RBP23.81■■□□□ 1.4
SNRPA1-205ENST00000558036 TROAPQ12815 778 aa23.81■■□□□ 1.4
SNRPA1-205ENST00000558036 OTUD7BQ6GQQ9 843 aa23.81■■□□□ 1.4
SNRPA1-205ENST00000558036 FAM173BQ6P4H8 233 aa23.81■■□□□ 1.4
SNRPA1-205ENST00000558036 GDPD2Q9HCC8 539 aa23.81■■□□□ 1.4
SNRPA1-205ENST00000558036 ECM29Q5VYK3 1845 aa23.81■■□□□ 1.4
SNRPA1-205ENST00000558036 FAM196BA6NMK8 535 aa23.8■■□□□ 1.4
SNRPA1-205ENST00000558036 AIFM3Q96NN9 605 aa23.8■■□□□ 1.4
SNRPA1-205ENST00000558036 STX8Q9UNK0 236 aa23.8■■□□□ 1.4
SNRPA1-205ENST00000558036 HLA-DOAP06340 250 aa23.8■■□□□ 1.4
SNRPA1-205ENST00000558036 CPLX2Q6PUV4 134 aaKnown RBP23.8■■□□□ 1.4
SNRPA1-205ENST00000558036 ARHGAP27Q6ZUM4 889 aa23.8■■□□□ 1.4
SNRPA1-205ENST00000558036 KIF3AQ9Y496 699 aa23.8■■□□□ 1.4
SNRPA1-205ENST00000558036 NID2Q14112 1375 aa23.8■■□□□ 1.4
SNRPA1-205ENST00000558036 TCP10L2B9ZVM9 353 aa23.79■■□□□ 1.4
SNRPA1-205ENST00000558036 GOLGA6L22H0YM25 854 aa23.79■■□□□ 1.4
SNRPA1-205ENST00000558036 CDKL5O76039 1030 aa23.79■■□□□ 1.4
SNRPA1-205ENST00000558036 SLC26A6Q9BXS9 759 aa23.78■■□□□ 1.4
SNRPA1-205ENST00000558036 PRPF40AO75400 957 aaKnown RBP23.78■■□□□ 1.4
SNRPA1-205ENST00000558036 SHMT1P34896 483 aa23.78■■□□□ 1.4
SNRPA1-205ENST00000558036 TNIP1Q15025 636 aa23.78■■□□□ 1.4
SNRPA1-205ENST00000558036 DNAJC18Q9H819 358 aa23.78■■□□□ 1.4
SNRPA1-205ENST00000558036 KAT14Q9H8E8 782 aa23.78■■□□□ 1.4
SNRPA1-205ENST00000558036 GJA3Q9Y6H8 435 aa23.78■■□□□ 1.4
SNRPA1-205ENST00000558036 AKR1B1P15121 316 aa23.77■■□□□ 1.4
SNRPA1-205ENST00000558036 RCAN1P53805 252 aa23.77■■□□□ 1.4
SNRPA1-205ENST00000558036 DNM1Q05193 864 aaKnown RBP23.77■■□□□ 1.4
SNRPA1-205ENST00000558036 DGKHQ86XP1 1220 aa23.77■■□□□ 1.4
SNRPA1-205ENST00000558036 NEDD1Q8NHV4 660 aa23.77■■□□□ 1.4
SNRPA1-205ENST00000558036 SYT17Q9BSW7 474 aa23.77■■□□□ 1.4
SNRPA1-205ENST00000558036 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.77■■□□□ 1.4
SNRPA1-205ENST00000558036 TCP11L1Q9NUJ3 509 aa23.77■■□□□ 1.4
SNRPA1-205ENST00000558036 MTMR7Q9Y216 660 aa23.77■■□□□ 1.4
SNRPA1-205ENST00000558036 CNPY2Q9Y2B0 182 aa23.77■■□□□ 1.4
SNRPA1-205ENST00000558036 PLEKHA8P1O95397 391 aa23.77■■□□□ 1.4
SNRPA1-205ENST00000558036 CRACR2BQ8N4Y2 399 aaPredicted RBP23.77■■□□□ 1.4
SNRPA1-205ENST00000558036 CEP95Q96GE4 821 aa23.77■■□□□ 1.4
SNRPA1-205ENST00000558036 ZNF70Q9UC06 446 aaPredicted RBP23.77■■□□□ 1.4
SNRPA1-205ENST00000558036 CCDC196A0A1B0GTZ2 297 aa23.76■■□□□ 1.39
SNRPA1-205ENST00000558036 FZD9O00144 591 aa23.76■■□□□ 1.39
SNRPA1-205ENST00000558036 TRAK2O60296 914 aa23.76■■□□□ 1.39
SNRPA1-205ENST00000558036 EGFRP00533 1210 aa23.76■■□□□ 1.39
SNRPA1-205ENST00000558036 PDIA4P13667 645 aaKnown RBP23.76■■□□□ 1.39
SNRPA1-205ENST00000558036 IFNAR1P17181 557 aa23.76■■□□□ 1.39
SNRPA1-205ENST00000558036 NCLP19338 710 aaKnown RBP23.76■■□□□ 1.39
SNRPA1-205ENST00000558036 GUCY1A2P33402 732 aa23.76■■□□□ 1.39
SNRPA1-205ENST00000558036 NBPF9Q3BBW0 867 aa23.76■■□□□ 1.39
SNRPA1-205ENST00000558036 CLEC10AQ8IUN9 316 aa23.76■■□□□ 1.39
SNRPA1-205ENST00000558036 PNMA1Q8ND90 353 aa23.76■■□□□ 1.39
SNRPA1-205ENST00000558036 C8orf76Q96K31 380 aa23.76■■□□□ 1.39
SNRPA1-205ENST00000558036 DHX36Q9H2U1 1008 aaKnown RBP23.76■■□□□ 1.39
SNRPA1-205ENST00000558036 VEZTQ9HBM0 779 aa23.76■■□□□ 1.39
SNRPA1-205ENST00000558036 LMBRD1Q9NUN5 540 aa23.76■■□□□ 1.39
SNRPA1-205ENST00000558036 ARFGEF1Q9Y6D6 1849 aa23.76■■□□□ 1.39
SNRPA1-205ENST00000558036 DDAH1O94760 285 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms