RNA–Protein interactions for RNA: ENST00000557765.1

GABRB3-213, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-213ENST00000557765 CABP5Q9NP86 173 aa12.32□□□□□ -0.44
GABRB3-213ENST00000557765 TOMM22Q9NS69 142 aa12.32□□□□□ -0.44
GABRB3-213ENST00000557765 ZBTB12Q9Y330 459 aaPredicted RBP12.32□□□□□ -0.44
GABRB3-213ENST00000557765 MYH1P12882 1939 aa12.32□□□□□ -0.44
GABRB3-213ENST00000557765 ZNF541Q9H0D2 1346 aa12.32□□□□□ -0.44
GABRB3-213ENST00000557765 WDR90Q96KV7 1748 aa12.31□□□□□ -0.44
GABRB3-213ENST00000557765 B4E1Z4 1266 aa12.31□□□□□ -0.44
GABRB3-213ENST00000557765 RANBP6O60518 1105 aaKnown RBP12.31□□□□□ -0.44
GABRB3-213ENST00000557765 PRELPP51888 382 aa12.31□□□□□ -0.44
GABRB3-213ENST00000557765 NUCB2P80303 420 aa12.31□□□□□ -0.44
GABRB3-213ENST00000557765 TOB2Q14106 344 aaPredicted RBP12.31□□□□□ -0.44
GABRB3-213ENST00000557765 TMEM67Q5HYA8 995 aa12.31□□□□□ -0.44
GABRB3-213ENST00000557765 CATIPQ7Z7H3 387 aa12.31□□□□□ -0.44
GABRB3-213ENST00000557765 SLC12A7Q9Y666 1083 aa12.31□□□□□ -0.44
GABRB3-213ENST00000557765 NEDD4P46934 1319 aa12.31□□□□□ -0.44
GABRB3-213ENST00000557765 ASNSP08243 561 aa12.3□□□□□ -0.44
GABRB3-213ENST00000557765 RASA1P20936 1047 aa12.3□□□□□ -0.44
GABRB3-213ENST00000557765 PLCD1P51178 756 aa12.3□□□□□ -0.44
GABRB3-213ENST00000557765 CTDSPL2Q05D32 466 aa12.3□□□□□ -0.44
GABRB3-213ENST00000557765 TRAF1Q13077 416 aa12.3□□□□□ -0.44
GABRB3-213ENST00000557765 PICALMQ13492 652 aa12.3□□□□□ -0.44
GABRB3-213ENST00000557765 IFIT1BQ5T764 474 aaKnown RBP12.3□□□□□ -0.44
GABRB3-213ENST00000557765 WASF1Q92558 559 aa12.3□□□□□ -0.44
GABRB3-213ENST00000557765 BRF1Q92994 677 aa12.3□□□□□ -0.44
GABRB3-213ENST00000557765 GTF3C6Q969F1 213 aa12.3□□□□□ -0.44
GABRB3-213ENST00000557765 DCPSQ96C86 337 aaKnown RBP12.3□□□□□ -0.44
GABRB3-213ENST00000557765 DDX4Q9NQI0 724 aaKnown RBP12.3□□□□□ -0.44
GABRB3-213ENST00000557765 NYAP2Q9P242 653 aa12.3□□□□□ -0.44
GABRB3-213ENST00000557765 TNKSO95271 1327 aa12.3□□□□□ -0.44
GABRB3-213ENST00000557765 ZBTB43O43298 467 aa12.29□□□□□ -0.44
GABRB3-213ENST00000557765 TTLL1O95922 423 aa12.29□□□□□ -0.44
GABRB3-213ENST00000557765 TOP1P11387 765 aaKnown RBP12.29□□□□□ -0.44
GABRB3-213ENST00000557765 NF2P35240 595 aa12.29□□□□□ -0.44
GABRB3-213ENST00000557765 TFAP4Q01664 338 aa12.29□□□□□ -0.44
GABRB3-213ENST00000557765 NFIAQ12857 509 aa12.29□□□□□ -0.44
GABRB3-213ENST00000557765 SEC23AQ15436 765 aa12.29□□□□□ -0.44
GABRB3-213ENST00000557765 CERKLQ49MI3 558 aaPredicted RBP12.29□□□□□ -0.44
GABRB3-213ENST00000557765 APOA5Q6Q788 366 aa12.29□□□□□ -0.44
GABRB3-213ENST00000557765 NFXL1Q6ZNB6 911 aa12.29□□□□□ -0.44
GABRB3-213ENST00000557765 MKL1Q969V6 931 aa12.29□□□□□ -0.44
GABRB3-213ENST00000557765 KAT14Q9H8E8 782 aa12.29□□□□□ -0.44
GABRB3-213ENST00000557765 LY9Q9HBG7 655 aa12.29□□□□□ -0.44
GABRB3-213ENST00000557765 BAZ2AQ9UIF9 1905 aaKnown RBP12.29□□□□□ -0.44
GABRB3-213ENST00000557765 CPLX1O14810 134 aa12.28□□□□□ -0.44
GABRB3-213ENST00000557765 CTNND1O60716 968 aaKnown RBP12.28□□□□□ -0.44
GABRB3-213ENST00000557765 PDIA3P30101 505 aaKnown RBP12.28□□□□□ -0.44
GABRB3-213ENST00000557765 ANTXR2P58335 489 aa12.28□□□□□ -0.44
GABRB3-213ENST00000557765 RASA3Q14644 834 aa12.28□□□□□ -0.44
GABRB3-213ENST00000557765 NBPF9Q3BBW0 867 aa12.28□□□□□ -0.44
GABRB3-213ENST00000557765 RRP12Q5JTH9 1297 aaKnown RBP12.28□□□□□ -0.44
GABRB3-213ENST00000557765 RBM26Q5T8P6 1007 aaKnown RBP12.28□□□□□ -0.44
GABRB3-213ENST00000557765 SULF1Q8IWU6 871 aa12.28□□□□□ -0.44
GABRB3-213ENST00000557765 CTCFLQ8NI51 663 aaPredicted RBP12.28□□□□□ -0.44
GABRB3-213ENST00000557765 DEFB129Q9H1M3 183 aa12.28□□□□□ -0.44
GABRB3-213ENST00000557765 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.28□□□□□ -0.44
GABRB3-213ENST00000557765 VEZTQ9HBM0 779 aa12.28□□□□□ -0.44
GABRB3-213ENST00000557765 MTMR4Q9NYA4 1195 aa12.28□□□□□ -0.44
GABRB3-213ENST00000557765 PNMA2Q9UL42 364 aa12.28□□□□□ -0.44
GABRB3-213ENST00000557765 ATP6V1DQ9Y5K8 247 aa12.28□□□□□ -0.44
GABRB3-213ENST00000557765 STK36Q9NRP7 1315 aa12.28□□□□□ -0.44
GABRB3-213ENST00000557765 CNTNAP1P78357 1384 aa12.28□□□□□ -0.44
GABRB3-213ENST00000557765 IGKV6D-41A0A0C4DH26 115 aa12.27□□□□□ -0.45
GABRB3-213ENST00000557765 hCG_1984214I3L0E3 225 aa12.27□□□□□ -0.45
GABRB3-213ENST00000557765 VEGFAP15692 232 aaPredicted RBP12.27□□□□□ -0.45
GABRB3-213ENST00000557765 XBP1P17861 261 aa12.27□□□□□ -0.45
GABRB3-213ENST00000557765 SHMT1P34896 483 aa12.27□□□□□ -0.45
GABRB3-213ENST00000557765 EPHX2P34913 555 aa12.27□□□□□ -0.45
GABRB3-213ENST00000557765 METAP2P50579 478 aaKnown RBP eCLIP12.27□□□□□ -0.45
GABRB3-213ENST00000557765 FKBP1BP68106 108 aa12.27□□□□□ -0.45
GABRB3-213ENST00000557765 GPATCH4Q5T3I0 446 aaKnown RBP12.27□□□□□ -0.45
GABRB3-213ENST00000557765 TRIM22Q8IYM9 498 aa12.27□□□□□ -0.45
GABRB3-213ENST00000557765 ZNF713Q8N859 430 aaPredicted RBP12.27□□□□□ -0.45
GABRB3-213ENST00000557765 ENAHQ8N8S7 591 aaPredicted RBP12.27□□□□□ -0.45
GABRB3-213ENST00000557765 ZNF341Q9BYN7 854 aa12.27□□□□□ -0.45
GABRB3-213ENST00000557765 CHMP5Q9NZZ3 219 aa12.27□□□□□ -0.45
GABRB3-213ENST00000557765 TPCN1Q9ULQ1 816 aa12.27□□□□□ -0.45
GABRB3-213ENST00000557765 SMC3Q9UQE7 1217 aa12.27□□□□□ -0.45
GABRB3-213ENST00000557765 KLF18A0A0U1RQI7 1052 aa12.26□□□□□ -0.45
GABRB3-213ENST00000557765 DDTLA6NHG4 134 aaPredicted RBP12.26□□□□□ -0.45
GABRB3-213ENST00000557765 TCP10L2B9ZVM9 353 aa12.26□□□□□ -0.45
GABRB3-213ENST00000557765 PPP1R12BO60237 982 aaPredicted RBP12.26□□□□□ -0.45
GABRB3-213ENST00000557765 DDNO94850 711 aaPredicted RBP12.26□□□□□ -0.45
GABRB3-213ENST00000557765 IFNAR1P17181 557 aa12.26□□□□□ -0.45
GABRB3-213ENST00000557765 TROAPQ12815 778 aa12.26□□□□□ -0.45
GABRB3-213ENST00000557765 ME3Q16798 604 aa12.26□□□□□ -0.45
GABRB3-213ENST00000557765 ABCB5Q2M3G0 1257 aa12.26□□□□□ -0.45
GABRB3-213ENST00000557765 ASPRV1Q53RT3 343 aa12.26□□□□□ -0.45
GABRB3-213ENST00000557765 CYB5R4Q7L1T6 521 aa12.26□□□□□ -0.45
GABRB3-213ENST00000557765 CDC37L1Q7L3B6 337 aa12.26□□□□□ -0.45
GABRB3-213ENST00000557765 ZNF654Q8IZM8 581 aa12.26□□□□□ -0.45
GABRB3-213ENST00000557765 FANCBQ8NB91 859 aa12.26□□□□□ -0.45
GABRB3-213ENST00000557765 GMCL1P1Q8NEA9 526 aa12.26□□□□□ -0.45
GABRB3-213ENST00000557765 TEPSINQ96N21 525 aa12.26□□□□□ -0.45
GABRB3-213ENST00000557765 RNF26Q9BY78 433 aaPredicted RBP12.26□□□□□ -0.45
GABRB3-213ENST00000557765 ARHGEF10LQ9HCE6 1279 aa12.26□□□□□ -0.45
GABRB3-213ENST00000557765 SAP30BPQ9UHR5 308 aaKnown RBP12.26□□□□□ -0.45
GABRB3-213ENST00000557765 ZNF112Q9UJU3 913 aa12.26□□□□□ -0.45
GABRB3-213ENST00000557765 TAF6LQ9Y6J9 622 aa12.26□□□□□ -0.45
GABRB3-213ENST00000557765 GOLGA8BA8MQT2 603 aa12.25□□□□□ -0.45
GABRB3-213ENST00000557765 PTMSP20962 102 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms