RNA–Protein interactions for RNA: ENST00000557678.1

GPHN-216, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-216ENST00000557678 GRK4P32298 578 aa5.32□□□□□ -1.56
GPHN-216ENST00000557678 CDK8P49336 464 aa5.32□□□□□ -1.56
GPHN-216ENST00000557678 NKG7Q16617 165 aa5.32□□□□□ -1.56
GPHN-216ENST00000557678 MLANAQ16655 118 aa5.32□□□□□ -1.56
GPHN-216ENST00000557678 LETMD1Q6P1Q0 360 aa5.32□□□□□ -1.56
GPHN-216ENST00000557678 MPZL3Q6UWV2 235 aa5.32□□□□□ -1.56
GPHN-216ENST00000557678 CYFIP1Q7L576 1253 aa5.32□□□□□ -1.56
GPHN-216ENST00000557678 HID1Q8IV36 788 aa5.32□□□□□ -1.56
GPHN-216ENST00000557678 MFSD2AQ8NA29 543 aa5.32□□□□□ -1.56
GPHN-216ENST00000557678 ANKRD24Q8TF21 1146 aa5.32□□□□□ -1.56
GPHN-216ENST00000557678 ATP13A1Q9HD20 1204 aa5.32□□□□□ -1.56
GPHN-216ENST00000557678 SNCAIPQ9Y6H5 919 aa5.32□□□□□ -1.56
GPHN-216ENST00000557678 PRPF40AO75400 957 aaKnown RBP5.31□□□□□ -1.56
GPHN-216ENST00000557678 CYP7A1P22680 504 aa5.31□□□□□ -1.56
GPHN-216ENST00000557678 AFMP43652 599 aa5.31□□□□□ -1.56
GPHN-216ENST00000557678 SLBPQ14493 270 aaKnown RBP eCLIP5.31□□□□□ -1.56
GPHN-216ENST00000557678 EAPPQ56P03 285 aaPredicted RBP5.31□□□□□ -1.56
GPHN-216ENST00000557678 PRAMEF13Q5VWM6 474 aa5.31□□□□□ -1.56
GPHN-216ENST00000557678 DIEXFQ68CQ4 756 aaKnown RBP5.31□□□□□ -1.56
GPHN-216ENST00000557678 ZNF746Q6NUN9 644 aaPredicted RBP5.31□□□□□ -1.56
GPHN-216ENST00000557678 FLAD1Q8NFF5 587 aa5.31□□□□□ -1.56
GPHN-216ENST00000557678 JARID2Q92833 1246 aaPredicted RBP5.31□□□□□ -1.56
GPHN-216ENST00000557678 GAL3ST3Q96A11 431 aa5.31□□□□□ -1.56
GPHN-216ENST00000557678 DUSP9Q99956 384 aaKnown RBP5.31□□□□□ -1.56
GPHN-216ENST00000557678 DPH2Q9BQC3 489 aaPredicted RBP5.31□□□□□ -1.56
GPHN-216ENST00000557678 PCDHB5Q9Y5E4 795 aa5.31□□□□□ -1.56
GPHN-216ENST00000557678 PGRP06401 933 aa5.3□□□□□ -1.56
GPHN-216ENST00000557678 CDH24Q86UP0 819 aa5.3□□□□□ -1.56
GPHN-216ENST00000557678 RIN3Q8TB24 985 aa5.3□□□□□ -1.56
GPHN-216ENST00000557678 MIR1-1HGQ9H1L0 117 aa5.3□□□□□ -1.56
GPHN-216ENST00000557678 FAM53CQ9NYF3 392 aa5.3□□□□□ -1.56
GPHN-216ENST00000557678 ZSWIM5Q9P217 1185 aa5.3□□□□□ -1.56
GPHN-216ENST00000557678 CTNND2Q9UQB3 1225 aa5.3□□□□□ -1.56
GPHN-216ENST00000557678 AK5Q9Y6K8 562 aa5.3□□□□□ -1.56
GPHN-216ENST00000557678 CNTNAP4Q9C0A0 1308 aa5.29□□□□□ -1.56
GPHN-216ENST00000557678 ANKRD33BA6NCL7 494 aa5.29□□□□□ -1.56
GPHN-216ENST00000557678 LIG3P49916 1009 aa5.29□□□□□ -1.56
GPHN-216ENST00000557678 TMEM67Q5HYA8 995 aa5.29□□□□□ -1.56
GPHN-216ENST00000557678 NPAS4Q8IUM7 802 aa5.29□□□□□ -1.56
GPHN-216ENST00000557678 AEBP1Q8IUX7 1158 aa5.29□□□□□ -1.56
GPHN-216ENST00000557678 UBE2FQ969M7 185 aa5.29□□□□□ -1.56
GPHN-216ENST00000557678 LIN37Q96GY3 246 aaPredicted RBP5.29□□□□□ -1.56
GPHN-216ENST00000557678 KIRREL1Q96J84 757 aa5.29□□□□□ -1.56
GPHN-216ENST00000557678 LMCD1Q9NZU5 365 aa5.29□□□□□ -1.56
GPHN-216ENST00000557678 CST3P01034 146 aaPredicted RBP5.28□□□□□ -1.56
GPHN-216ENST00000557678 RPS26P62854 115 aaKnown RBP5.28□□□□□ -1.56
GPHN-216ENST00000557678 PSMD2Q13200 908 aa5.28□□□□□ -1.56
GPHN-216ENST00000557678 FYB2Q5VWT5 728 aa5.28□□□□□ -1.56
GPHN-216ENST00000557678 FAM84AQ96KN4 292 aa5.28□□□□□ -1.56
GPHN-216ENST00000557678 SEMA3GQ9NS98 782 aa5.28□□□□□ -1.56
GPHN-216ENST00000557678 RNF19AQ9NV58 838 aa5.28□□□□□ -1.56
GPHN-216ENST00000557678 SLAMF8Q9P0V8 285 aa5.28□□□□□ -1.56
GPHN-216ENST00000557678 CAPN6Q9Y6Q1 641 aa5.28□□□□□ -1.56
GPHN-216ENST00000557678 DBX1A6NMT0 343 aa5.27□□□□□ -1.57
GPHN-216ENST00000557678 ZNF865P0CJ78 1059 aaPredicted RBP5.27□□□□□ -1.57
GPHN-216ENST00000557678 XPCQ01831 940 aaPredicted RBP5.27□□□□□ -1.57
GPHN-216ENST00000557678 PDE4BQ07343 736 aa5.27□□□□□ -1.57
GPHN-216ENST00000557678 MEI1Q5TIA1 1274 aa5.27□□□□□ -1.57
GPHN-216ENST00000557678 TRAIPQ9BWF2 469 aa5.27□□□□□ -1.57
GPHN-216ENST00000557678 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.27□□□□□ -1.57
GPHN-216ENST00000557678 ZNF503-AS2A6NEH8 195 aa5.26□□□□□ -1.57
GPHN-216ENST00000557678 F6X3S4 739 aa5.26□□□□□ -1.57
GPHN-216ENST00000557678 GLI1P08151 1106 aa5.26□□□□□ -1.57
GPHN-216ENST00000557678 CAP2P40123 477 aa5.26□□□□□ -1.57
GPHN-216ENST00000557678 ETV3P41162 512 aa5.26□□□□□ -1.57
GPHN-216ENST00000557678 KIR3DL1P43629 444 aa5.26□□□□□ -1.57
GPHN-216ENST00000557678 TNK2Q07912 1038 aa5.26□□□□□ -1.57
GPHN-216ENST00000557678 TSNAXIP1Q2TAA8 658 aa5.26□□□□□ -1.57
GPHN-216ENST00000557678 AGMOQ6ZNB7 445 aa5.26□□□□□ -1.57
GPHN-216ENST00000557678 CCDC120Q96HB5 630 aa5.26□□□□□ -1.57
GPHN-216ENST00000557678 TMEM87BQ96K49 555 aa5.26□□□□□ -1.57
GPHN-216ENST00000557678 ALPK1Q96QP1 1244 aa5.26□□□□□ -1.57
GPHN-216ENST00000557678 TJP2Q9UDY2 1190 aa5.26□□□□□ -1.57
GPHN-216ENST00000557678 PARP2Q9UGN5 583 aa5.26□□□□□ -1.57
GPHN-216ENST00000557678 TLR6Q9Y2C9 796 aa5.26□□□□□ -1.57
GPHN-216ENST00000557678 ST14Q9Y5Y6 855 aa5.26□□□□□ -1.57
GPHN-216ENST00000557678 RBAK-RBAKDNI3L0D1 243 aa5.25□□□□□ -1.57
GPHN-216ENST00000557678 GFRA2O00451 464 aa5.25□□□□□ -1.57
GPHN-216ENST00000557678 BPNT1O95861 308 aa5.25□□□□□ -1.57
GPHN-216ENST00000557678 RLBP1P12271 317 aa5.25□□□□□ -1.57
GPHN-216ENST00000557678 RAC2P15153 192 aa5.25□□□□□ -1.57
GPHN-216ENST00000557678 TFE3P19532 575 aaPredicted RBP5.25□□□□□ -1.57
GPHN-216ENST00000557678 SLC6A19Q695T7 634 aa5.25□□□□□ -1.57
GPHN-216ENST00000557678 PRR23BQ6ZRT6 265 aa5.25□□□□□ -1.57
GPHN-216ENST00000557678 C22orf34Q6ZV56 151 aa5.25□□□□□ -1.57
GPHN-216ENST00000557678 THAP5Q7Z6K1 395 aa5.25□□□□□ -1.57
GPHN-216ENST00000557678 TTC6Q86TZ1 520 aa5.25□□□□□ -1.57
GPHN-216ENST00000557678 CREG2Q8IUH2 290 aa5.25□□□□□ -1.57
GPHN-216ENST00000557678 COX4I2Q96KJ9 171 aa5.25□□□□□ -1.57
GPHN-216ENST00000557678 DIRC2Q96SL1 478 aa5.25□□□□□ -1.57
GPHN-216ENST00000557678 PLCG1P19174 1290 aa5.24□□□□□ -1.57
GPHN-216ENST00000557678 GDNFP39905 211 aa5.24□□□□□ -1.57
GPHN-216ENST00000557678 RAP1GAPP47736 663 aa5.24□□□□□ -1.57
GPHN-216ENST00000557678 TNNI2P48788 182 aa5.24□□□□□ -1.57
GPHN-216ENST00000557678 HK2P52789 917 aa5.24□□□□□ -1.57
GPHN-216ENST00000557678 CHMP4BP1P59074 171 aa5.24□□□□□ -1.57
GPHN-216ENST00000557678 RPL6Q02878 288 aaKnown RBP5.24□□□□□ -1.57
GPHN-216ENST00000557678 TAF1CQ15572 869 aaPredicted RBP5.24□□□□□ -1.57
GPHN-216ENST00000557678 SYDE1Q6ZW31 735 aaPredicted RBP5.24□□□□□ -1.57
GPHN-216ENST00000557678 SND1Q7KZF4 910 aaKnown RBP eCLIP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms