RNA–Protein interactions for RNA: ENST00000557640.1

RD3L-201, Transcript of retinal degeneration 3 like, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RD3L, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3L-201ENST00000557640 ANKRD2Q9GZV1 360 aa10.14□□□□□ -0.79
RD3L-201ENST00000557640 PPP1R12BO60237 982 aaPredicted RBP10.13□□□□□ -0.79
RD3L-201ENST00000557640 TIMP2P16035 220 aa10.13□□□□□ -0.79
RD3L-201ENST00000557640 VARSP26640 1264 aaKnown RBP10.13□□□□□ -0.79
RD3L-201ENST00000557640 INHBEP58166 350 aa10.13□□□□□ -0.79
RD3L-201ENST00000557640 FLIIQ13045 1269 aa10.13□□□□□ -0.79
RD3L-201ENST00000557640 CCDC184Q52MB2 194 aa10.13□□□□□ -0.79
RD3L-201ENST00000557640 ANKRD13AQ8IZ07 590 aa10.13□□□□□ -0.79
RD3L-201ENST00000557640 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.13□□□□□ -0.79
RD3L-201ENST00000557640 UNC93B1Q9H1C4 597 aa10.13□□□□□ -0.79
RD3L-201ENST00000557640 TDRD3Q9H7E2 651 aaKnown RBP10.13□□□□□ -0.79
RD3L-201ENST00000557640 ZNF70Q9UC06 446 aaPredicted RBP10.13□□□□□ -0.79
RD3L-201ENST00000557640 SNCAIPQ9Y6H5 919 aa10.13□□□□□ -0.79
RD3L-201ENST00000557640 DOCK3Q8IZD9 2030 aa10.12□□□□□ -0.79
RD3L-201ENST00000557640 FAM205AQ6ZU69 1335 aa10.12□□□□□ -0.79
RD3L-201ENST00000557640 ADGRA2Q96PE1 1338 aa10.12□□□□□ -0.79
RD3L-201ENST00000557640 A0A0C4DFX4 3053 aa10.12□□□□□ -0.79
RD3L-201ENST00000557640 CCL15-CCL14A0A0B4J2E2 113 aa10.12□□□□□ -0.79
RD3L-201ENST00000557640 ADH1CP00326 375 aa10.12□□□□□ -0.79
RD3L-201ENST00000557640 KCNJ4P48050 445 aa10.12□□□□□ -0.79
RD3L-201ENST00000557640 IREB2P48200 963 aaKnown RBP10.12□□□□□ -0.79
RD3L-201ENST00000557640 MMP14P50281 582 aa10.12□□□□□ -0.79
RD3L-201ENST00000557640 CACNB3P54284 484 aa10.12□□□□□ -0.79
RD3L-201ENST00000557640 NEXNQ0ZGT2 675 aa10.12□□□□□ -0.79
RD3L-201ENST00000557640 TAF1CQ15572 869 aaPredicted RBP10.12□□□□□ -0.79
RD3L-201ENST00000557640 CCL15Q16663 113 aa10.12□□□□□ -0.79
RD3L-201ENST00000557640 SLC9C1Q4G0N8 1177 aa10.12□□□□□ -0.79
RD3L-201ENST00000557640 MPHOSPH8Q99549 860 aa10.12□□□□□ -0.79
RD3L-201ENST00000557640 PRKRIP1Q9H875 184 aaPredicted RBP10.12□□□□□ -0.79
RD3L-201ENST00000557640 UNC80Q8N2C7 3258 aa10.12□□□□□ -0.79
RD3L-201ENST00000557640 AK9Q5TCS8 1911 aa10.11□□□□□ -0.79
RD3L-201ENST00000557640 DOCK1Q14185 1865 aa10.11□□□□□ -0.79
RD3L-201ENST00000557640 TCP10L2B9ZVM9 353 aa10.11□□□□□ -0.79
RD3L-201ENST00000557640 F6X3S4 739 aa10.11□□□□□ -0.79
RD3L-201ENST00000557640 GYG1P46976 350 aa10.11□□□□□ -0.79
RD3L-201ENST00000557640 FKBP1AP62942 108 aaKnown RBP10.11□□□□□ -0.79
RD3L-201ENST00000557640 MTFR1Q15390 333 aa10.11□□□□□ -0.79
RD3L-201ENST00000557640 TWISTNBQ3B726 338 aaPredicted RBP10.11□□□□□ -0.79
RD3L-201ENST00000557640 ZNF804AQ7Z570 1209 aa10.11□□□□□ -0.79
RD3L-201ENST00000557640 DNAAF4Q8WXU2 420 aa10.11□□□□□ -0.79
RD3L-201ENST00000557640 PRO3102Q9H379 93 aa10.11□□□□□ -0.79
RD3L-201ENST00000557640 CUL9Q8IWT3 2517 aa10.1□□□□□ -0.79
RD3L-201ENST00000557640 FANCIQ9NVI1 1328 aa10.1□□□□□ -0.79
RD3L-201ENST00000557640 ANKRD18BA2A2Z9 1011 aa10.1□□□□□ -0.79
RD3L-201ENST00000557640 SPDYE5A6NIY4 337 aa10.1□□□□□ -0.79
RD3L-201ENST00000557640 UNCXA6NJT0 531 aa10.1□□□□□ -0.79
RD3L-201ENST00000557640 BTBD19C9JJ37 291 aa10.1□□□□□ -0.79
RD3L-201ENST00000557640 PPFIA3O75145 1194 aa10.1□□□□□ -0.79
RD3L-201ENST00000557640 SUPT20HL1Q3ZLR7 823 aa10.1□□□□□ -0.79
RD3L-201ENST00000557640 MFSD14BQ5SR56 506 aa10.1□□□□□ -0.79
RD3L-201ENST00000557640 C6orf118Q5T5N4 469 aa10.1□□□□□ -0.79
RD3L-201ENST00000557640 UBE2Q1Q7Z7E8 422 aa10.1□□□□□ -0.79
RD3L-201ENST00000557640 DZIP1LQ8IYY4 767 aaKnown RBP10.1□□□□□ -0.79
RD3L-201ENST00000557640 LINS1Q8NG48 757 aa10.1□□□□□ -0.79
RD3L-201ENST00000557640 TDRD7Q8NHU6 1098 aaKnown RBP10.1□□□□□ -0.79
RD3L-201ENST00000557640 PUS3Q9BZE2 481 aaKnown RBP10.1□□□□□ -0.79
RD3L-201ENST00000557640 EVA1BQ9NVM1 165 aa10.1□□□□□ -0.79
RD3L-201ENST00000557640 EYSQ5T1H1 3165 aa10.1□□□□□ -0.79
RD3L-201ENST00000557640 PLXNB2O15031 1838 aa10.1□□□□□ -0.79
RD3L-201ENST00000557640 ATAD5Q96QE3 1844 aa10.1□□□□□ -0.79
RD3L-201ENST00000557640 PLIN1O60240 522 aa10.09□□□□□ -0.79
RD3L-201ENST00000557640 CRKP46108 304 aa10.09□□□□□ -0.79
RD3L-201ENST00000557640 RBM5P52756 815 aaKnown RBP eCLIP10.09□□□□□ -0.79
RD3L-201ENST00000557640 LACTBP83111 547 aaPredicted RBP10.09□□□□□ -0.79
RD3L-201ENST00000557640 FKBP5Q13451 457 aaPredicted RBP10.09□□□□□ -0.79
RD3L-201ENST00000557640 BEND3Q5T5X7 828 aa10.09□□□□□ -0.79
RD3L-201ENST00000557640 LMBR1LQ6UX01 489 aa10.09□□□□□ -0.79
RD3L-201ENST00000557640 ZNF511Q8NB15 262 aa10.09□□□□□ -0.79
RD3L-201ENST00000557640 ZKSCAN4Q969J2 545 aaPredicted RBP10.09□□□□□ -0.79
RD3L-201ENST00000557640 KAZALD1Q96I82 304 aa10.09□□□□□ -0.79
RD3L-201ENST00000557640 STK31Q9BXU1 1019 aa10.09□□□□□ -0.79
RD3L-201ENST00000557640 TTF2Q9UNY4 1162 aaKnown RBP10.09□□□□□ -0.79
RD3L-201ENST00000557640 IQSEC3Q9UPP2 1182 aaPredicted RBP10.09□□□□□ -0.79
RD3L-201ENST00000557640 CHMP3Q9Y3E7 222 aa10.09□□□□□ -0.79
RD3L-201ENST00000557640 LOC285556D6RIA3 1793 aa10.09□□□□□ -0.79
RD3L-201ENST00000557640 DDX60LQ5H9U9 1706 aaKnown RBP10.08□□□□□ -0.8
RD3L-201ENST00000557640 SOX1O00570 391 aaPredicted RBP10.08□□□□□ -0.8
RD3L-201ENST00000557640 IRF6O14896 467 aa10.08□□□□□ -0.8
RD3L-201ENST00000557640 MYO1BO43795 1136 aa10.08□□□□□ -0.8
RD3L-201ENST00000557640 FDX1P10109 184 aa10.08□□□□□ -0.8
RD3L-201ENST00000557640 CALD1Q05682 793 aaKnown RBP10.08□□□□□ -0.8
RD3L-201ENST00000557640 MAP2K5Q13163 448 aa10.08□□□□□ -0.8
RD3L-201ENST00000557640 MOGSQ13724 837 aa10.08□□□□□ -0.8
RD3L-201ENST00000557640 SLC4A8Q2Y0W8 1093 aa10.08□□□□□ -0.8
RD3L-201ENST00000557640 FAM84BQ96KN1 310 aaPredicted RBP10.08□□□□□ -0.8
RD3L-201ENST00000557640 SERPINA10Q9UK55 444 aa10.08□□□□□ -0.8
RD3L-201ENST00000557640 RPAP1Q9BWH6 1393 aaPredicted RBP10.08□□□□□ -0.8
RD3L-201ENST00000557640 FRMPD3Q5JV73 1810 aa10.07□□□□□ -0.8
RD3L-201ENST00000557640 MYH2Q9UKX2 1941 aa10.07□□□□□ -0.8
RD3L-201ENST00000557640 LAMA2P24043 3122 aaKnown RBP10.07□□□□□ -0.8
RD3L-201ENST00000557640 RNF225M0QZC1 329 aaPredicted RBP10.07□□□□□ -0.8
RD3L-201ENST00000557640 TLR2O60603 784 aa10.07□□□□□ -0.8
RD3L-201ENST00000557640 GTF2A2P52657 109 aa10.07□□□□□ -0.8
RD3L-201ENST00000557640 KCNH2Q12809 1159 aa10.07□□□□□ -0.8
RD3L-201ENST00000557640 IFIT5Q13325 482 aaKnown RBP10.07□□□□□ -0.8
RD3L-201ENST00000557640 PTPRNQ16849 979 aa10.07□□□□□ -0.8
RD3L-201ENST00000557640 OTUD7BQ6GQQ9 843 aa10.07□□□□□ -0.8
RD3L-201ENST00000557640 WWC1Q8IX03 1113 aa10.07□□□□□ -0.8
RD3L-201ENST00000557640 WRNIP1Q96S55 665 aa10.07□□□□□ -0.8
RD3L-201ENST00000557640 MYH16Q9H6N6 1097 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms