RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 BRINP2Q9C0B6 783 aa6.81□□□□□ -1.32
MTHFD1-216ENST00000557539 KANSL2Q9H9L4 492 aa6.81□□□□□ -1.32
MTHFD1-216ENST00000557539 AVENQ9NQS1 362 aaPredicted RBP6.81□□□□□ -1.32
MTHFD1-216ENST00000557539 PRDM10Q9NQV6 1147 aa6.81□□□□□ -1.32
MTHFD1-216ENST00000557539 SEC31BQ9NQW1 1179 aa6.81□□□□□ -1.32
MTHFD1-216ENST00000557539 ST7Q9NRC1 585 aa6.81□□□□□ -1.32
MTHFD1-216ENST00000557539 DZANK1Q9NVP4 752 aa6.81□□□□□ -1.32
MTHFD1-216ENST00000557539 FANCLQ9NW38 375 aa6.81□□□□□ -1.32
MTHFD1-216ENST00000557539 GPN3Q9UHW5 284 aaPredicted RBP6.81□□□□□ -1.32
MTHFD1-216ENST00000557539 SETD5Q9C0A6 1442 aa6.81□□□□□ -1.32
MTHFD1-216ENST00000557539 PNPLA6Q8IY17 1366 aa6.81□□□□□ -1.32
MTHFD1-216ENST00000557539 TNRQ92752 1358 aa6.81□□□□□ -1.32
MTHFD1-216ENST00000557539 DISP2A7MBM2 1401 aa6.8□□□□□ -1.32
MTHFD1-216ENST00000557539 DNAJC6O75061 913 aa6.8□□□□□ -1.32
MTHFD1-216ENST00000557539 KIF4AO95239 1232 aa6.8□□□□□ -1.32
MTHFD1-216ENST00000557539 F13A1P00488 732 aa6.8□□□□□ -1.32
MTHFD1-216ENST00000557539 KCNA6P17658 529 aa6.8□□□□□ -1.32
MTHFD1-216ENST00000557539 ITPKAP23677 461 aa6.8□□□□□ -1.32
MTHFD1-216ENST00000557539 TIAM1Q13009 1591 aa6.8□□□□□ -1.32
MTHFD1-216ENST00000557539 PLEKHG4Q58EX7 1191 aa6.8□□□□□ -1.32
MTHFD1-216ENST00000557539 BNC2Q6ZN30 1099 aaPredicted RBP6.8□□□□□ -1.32
MTHFD1-216ENST00000557539 FAM169BQ8N8A8 192 aa6.8□□□□□ -1.32
MTHFD1-216ENST00000557539 ASAP3Q8TDY4 903 aa6.8□□□□□ -1.32
MTHFD1-216ENST00000557539 JARID2Q92833 1246 aaPredicted RBP6.8□□□□□ -1.32
MTHFD1-216ENST00000557539 FERD3LQ96RJ6 166 aa6.8□□□□□ -1.32
MTHFD1-216ENST00000557539 CRBNQ96SW2 442 aa6.8□□□□□ -1.32
MTHFD1-216ENST00000557539 DNAJC7Q99615 494 aa6.8□□□□□ -1.32
MTHFD1-216ENST00000557539 SLKQ9H2G2 1235 aaPredicted RBP6.8□□□□□ -1.32
MTHFD1-216ENST00000557539 SPC25Q9HBM1 224 aa6.8□□□□□ -1.32
MTHFD1-216ENST00000557539 TLR7Q9NYK1 1049 aaKnown RBP6.8□□□□□ -1.32
MTHFD1-216ENST00000557539 UGGT1Q9NYU2 1555 aa6.8□□□□□ -1.32
MTHFD1-216ENST00000557539 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.8□□□□□ -1.32
MTHFD1-216ENST00000557539 A0A096LPE4 126 aa6.79□□□□□ -1.32
MTHFD1-216ENST00000557539 A0A1W2PPZ6 126 aa6.79□□□□□ -1.32
MTHFD1-216ENST00000557539 GNB5O14775 395 aa6.79□□□□□ -1.32
MTHFD1-216ENST00000557539 PPP1R12AO14974 1030 aaPredicted RBP6.79□□□□□ -1.32
MTHFD1-216ENST00000557539 ZNF157P51786 506 aaPredicted RBP6.79□□□□□ -1.32
MTHFD1-216ENST00000557539 RPS26P62854 115 aaKnown RBP6.79□□□□□ -1.32
MTHFD1-216ENST00000557539 PLAURQ03405 335 aa6.79□□□□□ -1.32
MTHFD1-216ENST00000557539 IFRD2Q12894 506 aaPredicted RBP6.79□□□□□ -1.32
MTHFD1-216ENST00000557539 LAMC2Q13753 1193 aa6.79□□□□□ -1.32
MTHFD1-216ENST00000557539 TRIM42Q8IWZ5 723 aa6.79□□□□□ -1.32
MTHFD1-216ENST00000557539 LILRB2Q8N423 598 aa6.79□□□□□ -1.32
MTHFD1-216ENST00000557539 CEP120Q8N960 986 aa6.79□□□□□ -1.32
MTHFD1-216ENST00000557539 NSUN5Q96P11 429 aaKnown RBP6.79□□□□□ -1.32
MTHFD1-216ENST00000557539 CCDC113Q9H0I3 377 aa6.79□□□□□ -1.32
MTHFD1-216ENST00000557539 PCDH12Q9NPG4 1184 aa6.79□□□□□ -1.32
MTHFD1-216ENST00000557539 ACTR10Q9NZ32 417 aa6.79□□□□□ -1.32
MTHFD1-216ENST00000557539 PCDHB5Q9Y5E4 795 aa6.79□□□□□ -1.32
MTHFD1-216ENST00000557539 ABCC3O15438 1527 aa6.79□□□□□ -1.32
MTHFD1-216ENST00000557539 ROBO2Q9HCK4 1378 aa6.79□□□□□ -1.32
MTHFD1-216ENST00000557539 BIVM-ERCC5R4GMW8 1640 aa6.79□□□□□ -1.32
MTHFD1-216ENST00000557539 ZNF518AQ6AHZ1 1483 aa6.79□□□□□ -1.32
MTHFD1-216ENST00000557539 ESYT3A0FGR9 886 aa6.78□□□□□ -1.32
MTHFD1-216ENST00000557539 TRIM37O94972 964 aa6.78□□□□□ -1.32
MTHFD1-216ENST00000557539 SOX18P35713 384 aa6.78□□□□□ -1.32
MTHFD1-216ENST00000557539 GIPRP48546 466 aa6.78□□□□□ -1.32
MTHFD1-216ENST00000557539 HNRNPMP52272 730 aaKnown RBP eCLIP6.78□□□□□ -1.32
MTHFD1-216ENST00000557539 FAAP100Q0VG06 881 aa6.78□□□□□ -1.32
MTHFD1-216ENST00000557539 DDR2Q16832 855 aa6.78□□□□□ -1.32
MTHFD1-216ENST00000557539 CWF19L2Q2TBE0 894 aaKnown RBP6.78□□□□□ -1.32
MTHFD1-216ENST00000557539 ALYREFQ86V81 257 aaKnown RBP6.78□□□□□ -1.32
MTHFD1-216ENST00000557539 APPBP2Q92624 585 aa6.78□□□□□ -1.32
MTHFD1-216ENST00000557539 PLD4Q96BZ4 506 aa6.78□□□□□ -1.32
MTHFD1-216ENST00000557539 TRIM11Q96F44 468 aa6.78□□□□□ -1.32
MTHFD1-216ENST00000557539 SLC30A3Q99726 388 aa6.78□□□□□ -1.32
MTHFD1-216ENST00000557539 BHLHE41Q9C0J9 482 aaPredicted RBP6.78□□□□□ -1.32
MTHFD1-216ENST00000557539 MIR1-1HGQ9H1L0 117 aa6.78□□□□□ -1.32
MTHFD1-216ENST00000557539 METTL14Q9HCE5 456 aaKnown RBP6.78□□□□□ -1.32
MTHFD1-216ENST00000557539 KLHL42Q9P2K6 505 aa6.78□□□□□ -1.32
MTHFD1-216ENST00000557539 PRR12Q9ULL5 1215 aa6.78□□□□□ -1.32
MTHFD1-216ENST00000557539 MSRB2Q9Y3D2 182 aa6.78□□□□□ -1.32
MTHFD1-216ENST00000557539 ABCA6Q8N139 1617 aa6.78□□□□□ -1.32
MTHFD1-216ENST00000557539 PRDM15P57071 1507 aaPredicted RBP6.77□□□□□ -1.33
MTHFD1-216ENST00000557539 UGGT2Q9NYU1 1516 aa6.77□□□□□ -1.33
MTHFD1-216ENST00000557539 RGPD1P0DJD0 1748 aa6.77□□□□□ -1.33
MTHFD1-216ENST00000557539 ADAM23O75077 832 aa6.77□□□□□ -1.33
MTHFD1-216ENST00000557539 ZNF165P49910 485 aa6.77□□□□□ -1.33
MTHFD1-216ENST00000557539 SEPT6Q14141 434 aa6.77□□□□□ -1.33
MTHFD1-216ENST00000557539 BRINP3Q76B58 766 aa6.77□□□□□ -1.33
MTHFD1-216ENST00000557539 DHX32Q7L7V1 743 aaKnown RBP6.77□□□□□ -1.33
MTHFD1-216ENST00000557539 RAB44Q7Z6P3 723 aaPredicted RBP6.77□□□□□ -1.33
MTHFD1-216ENST00000557539 SYT9Q86SS6 491 aa6.77□□□□□ -1.33
MTHFD1-216ENST00000557539 HOMER1Q86YM7 354 aa6.77□□□□□ -1.33
MTHFD1-216ENST00000557539 TMEM102Q8N9M5 508 aaPredicted RBP6.77□□□□□ -1.33
MTHFD1-216ENST00000557539 TRPM4Q8TD43 1214 aa6.77□□□□□ -1.33
MTHFD1-216ENST00000557539 GATAD2BQ8WXI9 593 aa6.77□□□□□ -1.33
MTHFD1-216ENST00000557539 BHMTQ93088 406 aa6.77□□□□□ -1.33
MTHFD1-216ENST00000557539 NXPE3Q969Y0 559 aa6.77□□□□□ -1.33
MTHFD1-216ENST00000557539 LRRC3Q9BY71 257 aa6.77□□□□□ -1.33
MTHFD1-216ENST00000557539 ZNF576Q9H609 170 aa6.77□□□□□ -1.33
MTHFD1-216ENST00000557539 NFKBIEO00221 500 aa6.76□□□□□ -1.33
MTHFD1-216ENST00000557539 PDE2AO00408 941 aaPredicted RBP6.76□□□□□ -1.33
MTHFD1-216ENST00000557539 FOXN1O15353 648 aa6.76□□□□□ -1.33
MTHFD1-216ENST00000557539 PDPK1O15530 556 aa6.76□□□□□ -1.33
MTHFD1-216ENST00000557539 MAP3K6O95382 1288 aa6.76□□□□□ -1.33
MTHFD1-216ENST00000557539 SPEM2Q0P670 501 aa6.76□□□□□ -1.33
MTHFD1-216ENST00000557539 MPP2Q14168 576 aa6.76□□□□□ -1.33
MTHFD1-216ENST00000557539 RPS26P11Q5JNZ5 115 aaPredicted RBP6.76□□□□□ -1.33
MTHFD1-216ENST00000557539 LARP1BQ659C4 914 aaKnown RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms