RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 POLR2BP30876 1174 aaKnown RBP7.02□□□□□ -1.29
PRPF39-212ENST00000557477 CASP7P55210 303 aa7.02□□□□□ -1.29
PRPF39-212ENST00000557477 MLECQ14165 292 aa7.02□□□□□ -1.29
PRPF39-212ENST00000557477 ZYXQ15942 572 aaKnown RBP7.02□□□□□ -1.29
PRPF39-212ENST00000557477 LARP1BQ659C4 914 aaKnown RBP7.02□□□□□ -1.29
PRPF39-212ENST00000557477 TTC6Q86TZ1 520 aa7.02□□□□□ -1.29
PRPF39-212ENST00000557477 HID1Q8IV36 788 aa7.02□□□□□ -1.29
PRPF39-212ENST00000557477 MCATQ8IVS2 390 aaKnown RBP7.02□□□□□ -1.29
PRPF39-212ENST00000557477 C19orf47Q8N9M1 422 aaKnown RBP7.02□□□□□ -1.29
PRPF39-212ENST00000557477 FAM13CQ8NE31 585 aa7.02□□□□□ -1.29
PRPF39-212ENST00000557477 ZNF507Q8TCN5 953 aa7.02□□□□□ -1.29
PRPF39-212ENST00000557477 MICAL1Q8TDZ2 1067 aa7.02□□□□□ -1.29
PRPF39-212ENST00000557477 WFDC12Q8WWY7 111 aa7.02□□□□□ -1.29
PRPF39-212ENST00000557477 CNNM2Q9H8M5 875 aa7.02□□□□□ -1.29
PRPF39-212ENST00000557477 PIDD1Q9HB75 910 aa7.02□□□□□ -1.29
PRPF39-212ENST00000557477 SHROOM4Q9ULL8 1493 aa7.01□□□□□ -1.29
PRPF39-212ENST00000557477 C9orf172C9J069 976 aa7.01□□□□□ -1.29
PRPF39-212ENST00000557477 IREB2P48200 963 aaKnown RBP7.01□□□□□ -1.29
PRPF39-212ENST00000557477 SLBPQ14493 270 aaKnown RBP eCLIP7.01□□□□□ -1.29
PRPF39-212ENST00000557477 MBTPS1Q14703 1052 aa7.01□□□□□ -1.29
PRPF39-212ENST00000557477 CDCP2Q5VXM1 449 aa7.01□□□□□ -1.29
PRPF39-212ENST00000557477 MRPL41Q8IXM3 137 aaKnown RBP7.01□□□□□ -1.29
PRPF39-212ENST00000557477 TAB3Q8N5C8 712 aaPredicted RBP7.01□□□□□ -1.29
PRPF39-212ENST00000557477 DCAF5Q96JK2 942 aa7.01□□□□□ -1.29
PRPF39-212ENST00000557477 UBL7Q96S82 380 aaPredicted RBP7.01□□□□□ -1.29
PRPF39-212ENST00000557477 SLC9A7Q96T83 725 aa7.01□□□□□ -1.29
PRPF39-212ENST00000557477 ST7Q9NRC1 585 aa7.01□□□□□ -1.29
PRPF39-212ENST00000557477 SIRPGQ9P1W8 387 aa7.01□□□□□ -1.29
PRPF39-212ENST00000557477 CDK11AQ9UQ88 783 aaPredicted RBP7.01□□□□□ -1.29
PRPF39-212ENST00000557477 KRBA1A5PL33 1030 aa7□□□□□ -1.29
PRPF39-212ENST00000557477 CCDC85CA6NKD9 419 aa7□□□□□ -1.29
PRPF39-212ENST00000557477 B2RBV5 119 aa7□□□□□ -1.29
PRPF39-212ENST00000557477 TNFRSF10CO14798 259 aa7□□□□□ -1.29
PRPF39-212ENST00000557477 U2SURPO15042 1029 aaKnown RBP7□□□□□ -1.29
PRPF39-212ENST00000557477 SMARCA5O60264 1052 aaPredicted RBP7□□□□□ -1.29
PRPF39-212ENST00000557477 GDF11O95390 407 aa7□□□□□ -1.29
PRPF39-212ENST00000557477 RAB6AP20340 208 aa7□□□□□ -1.29
PRPF39-212ENST00000557477 NRG1Q02297 640 aaPredicted RBP7□□□□□ -1.29
PRPF39-212ENST00000557477 ADGRE1Q14246 886 aa7□□□□□ -1.29
PRPF39-212ENST00000557477 DDR2Q16832 855 aa7□□□□□ -1.29
PRPF39-212ENST00000557477 PRAMEF13Q5VWM6 474 aa7□□□□□ -1.29
PRPF39-212ENST00000557477 CDPF1Q6NVV7 123 aa7□□□□□ -1.29
PRPF39-212ENST00000557477 CDC37L1Q7L3B6 337 aa7□□□□□ -1.29
PRPF39-212ENST00000557477 SLFN12Q8IYM2 578 aa7□□□□□ -1.29
PRPF39-212ENST00000557477 SMYD4Q8IYR2 804 aaPredicted RBP7□□□□□ -1.29
PRPF39-212ENST00000557477 FAM46AQ96IP4 442 aaKnown RBP7□□□□□ -1.29
PRPF39-212ENST00000557477 CEP41Q9BYV8 373 aa7□□□□□ -1.29
PRPF39-212ENST00000557477 ACSS3Q9H6R3 686 aa7□□□□□ -1.29
PRPF39-212ENST00000557477 SART1O43290 800 aaKnown RBP6.99□□□□□ -1.29
PRPF39-212ENST00000557477 GAS2O43903 313 aaKnown RBP6.99□□□□□ -1.29
PRPF39-212ENST00000557477 RAG1P15918 1043 aa6.99□□□□□ -1.29
PRPF39-212ENST00000557477 YARSP54577 528 aaKnown RBP6.99□□□□□ -1.29
PRPF39-212ENST00000557477 RASA3Q14644 834 aa6.99□□□□□ -1.29
PRPF39-212ENST00000557477 SGO2Q562F6 1265 aa6.99□□□□□ -1.29
PRPF39-212ENST00000557477 SLC6A19Q695T7 634 aa6.99□□□□□ -1.29
PRPF39-212ENST00000557477 UNC5AQ6ZN44 842 aa6.99□□□□□ -1.29
PRPF39-212ENST00000557477 NOP9Q86U38 636 aaKnown RBP6.99□□□□□ -1.29
PRPF39-212ENST00000557477 TMEM151AQ8N4L1 468 aa6.99□□□□□ -1.29
PRPF39-212ENST00000557477 MEGF10Q96KG7 1140 aa6.99□□□□□ -1.29
PRPF39-212ENST00000557477 SSU72Q9NP77 194 aaKnown RBP6.99□□□□□ -1.29
PRPF39-212ENST00000557477 SNTG2Q9NY99 539 aa6.99□□□□□ -1.29
PRPF39-212ENST00000557477 MAPK8IP1Q9UQF2 711 aa6.99□□□□□ -1.29
PRPF39-212ENST00000557477 LTBP3Q9NS15 1303 aa6.99□□□□□ -1.29
PRPF39-212ENST00000557477 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.98□□□□□ -1.29
PRPF39-212ENST00000557477 FAM221BA6H8Z2 402 aa6.98□□□□□ -1.29
PRPF39-212ENST00000557477 CST3P01034 146 aaPredicted RBP6.98□□□□□ -1.29
PRPF39-212ENST00000557477 CAP2P40123 477 aa6.98□□□□□ -1.29
PRPF39-212ENST00000557477 USP11P51784 963 aa6.98□□□□□ -1.29
PRPF39-212ENST00000557477 C6orf15Q6UXA7 325 aaPredicted RBP6.98□□□□□ -1.29
PRPF39-212ENST00000557477 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.98□□□□□ -1.29
PRPF39-212ENST00000557477 ARMCX6Q7L4S7 300 aa6.98□□□□□ -1.29
PRPF39-212ENST00000557477 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.98□□□□□ -1.29
PRPF39-212ENST00000557477 PHACTR4Q8IZ21 702 aa6.98□□□□□ -1.29
PRPF39-212ENST00000557477 KCT2Q8NC54 265 aa6.98□□□□□ -1.29
PRPF39-212ENST00000557477 XAGE3Q8WTP9 111 aa6.98□□□□□ -1.29
PRPF39-212ENST00000557477 FBLIM1Q8WUP2 373 aa6.98□□□□□ -1.29
PRPF39-212ENST00000557477 DEPDC7Q96QD5 511 aa6.98□□□□□ -1.29
PRPF39-212ENST00000557477 SRPK1Q96SB4 655 aaKnown RBP6.98□□□□□ -1.29
PRPF39-212ENST00000557477 KIF2CQ99661 725 aa6.98□□□□□ -1.29
PRPF39-212ENST00000557477 SEMA6CQ9H3T2 930 aa6.98□□□□□ -1.29
PRPF39-212ENST00000557477 LGR6Q9HBX8 967 aa6.98□□□□□ -1.29
PRPF39-212ENST00000557477 MSRB2Q9Y3D2 182 aa6.98□□□□□ -1.29
PRPF39-212ENST00000557477 DAGLAQ9Y4D2 1042 aa6.98□□□□□ -1.29
PRPF39-212ENST00000557477 DYNC1LI2O43237 492 aaPredicted RBP6.97□□□□□ -1.29
PRPF39-212ENST00000557477 GJB6O95452 261 aa6.97□□□□□ -1.29
PRPF39-212ENST00000557477 NFE2L2Q16236 605 aa6.97□□□□□ -1.29
PRPF39-212ENST00000557477 FXNQ16595 210 aa6.97□□□□□ -1.29
PRPF39-212ENST00000557477 INTS3Q68E01 1043 aaKnown RBP6.97□□□□□ -1.29
PRPF39-212ENST00000557477 DZIP1LQ8IYY4 767 aaKnown RBP6.97□□□□□ -1.29
PRPF39-212ENST00000557477 ARMC10Q8N2F6 343 aa6.97□□□□□ -1.29
PRPF39-212ENST00000557477 MKL1Q969V6 931 aa6.97□□□□□ -1.29
PRPF39-212ENST00000557477 FOXQ1Q9C009 403 aa6.97□□□□□ -1.29
PRPF39-212ENST00000557477 PCDHB10Q9UN67 800 aa6.97□□□□□ -1.29
PRPF39-212ENST00000557477 CCDC180Q9P1Z9 1646 aa6.97□□□□□ -1.29
PRPF39-212ENST00000557477 C1QTNF9BB2RNN3 333 aa6.96□□□□□ -1.3
PRPF39-212ENST00000557477 DDAH1O94760 285 aa6.96□□□□□ -1.3
PRPF39-212ENST00000557477 UBOX5O94941 541 aa6.96□□□□□ -1.3
PRPF39-212ENST00000557477 NFICP08651 508 aa6.96□□□□□ -1.3
PRPF39-212ENST00000557477 CHRNA4P43681 627 aa6.96□□□□□ -1.3
PRPF39-212ENST00000557477 MRM1Q6IN84 353 aaKnown RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms