RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 USP17L10C9JJH3 530 aa9.4□□□□□ -0.9
PSEN1-222ENST00000557356 USP17L12C9JPN9 530 aa9.4□□□□□ -0.9
PSEN1-222ENST00000557356 USP17L21D6R901 530 aa9.4□□□□□ -0.9
PSEN1-222ENST00000557356 PDHXO00330 501 aa9.4□□□□□ -0.9
PSEN1-222ENST00000557356 GNRH1P01148 92 aa9.4□□□□□ -0.9
PSEN1-222ENST00000557356 NEFLP07196 543 aa9.4□□□□□ -0.9
PSEN1-222ENST00000557356 SP3Q02447 781 aa9.4□□□□□ -0.9
PSEN1-222ENST00000557356 CRHR2Q13324 411 aa9.4□□□□□ -0.9
PSEN1-222ENST00000557356 ABCB5Q2M3G0 1257 aa9.4□□□□□ -0.9
PSEN1-222ENST00000557356 SBK1Q52WX2 424 aa9.4□□□□□ -0.9
PSEN1-222ENST00000557356 SH3D19Q5HYK7 790 aa9.4□□□□□ -0.9
PSEN1-222ENST00000557356 ZMYM1Q5SVZ6 1142 aa9.4□□□□□ -0.9
PSEN1-222ENST00000557356 C12orf60Q5U649 245 aa9.4□□□□□ -0.9
PSEN1-222ENST00000557356 TSHZ3Q63HK5 1081 aa9.4□□□□□ -0.9
PSEN1-222ENST00000557356 PRRT2Q7Z6L0 340 aaPredicted RBP9.4□□□□□ -0.9
PSEN1-222ENST00000557356 PLEKHM2Q8IWE5 1019 aa9.4□□□□□ -0.9
PSEN1-222ENST00000557356 OTUD7AQ8TE49 926 aaPredicted RBP9.4□□□□□ -0.9
PSEN1-222ENST00000557356 SDR42E1Q8WUS8 393 aa9.4□□□□□ -0.9
PSEN1-222ENST00000557356 ZNF296Q8WUU4 475 aaPredicted RBP9.4□□□□□ -0.9
PSEN1-222ENST00000557356 OSBP2Q969R2 916 aa9.4□□□□□ -0.9
PSEN1-222ENST00000557356 PARK7Q99497 189 aaKnown RBP9.4□□□□□ -0.9
PSEN1-222ENST00000557356 HELLSQ9NRZ9 838 aa9.4□□□□□ -0.9
PSEN1-222ENST00000557356 FAM196BA6NMK8 535 aa9.39□□□□□ -0.91
PSEN1-222ENST00000557356 GPAA1O43292 621 aa9.39□□□□□ -0.91
PSEN1-222ENST00000557356 CENPBP07199 599 aaPredicted RBP9.39□□□□□ -0.91
PSEN1-222ENST00000557356 OSBPP22059 807 aa9.39□□□□□ -0.91
PSEN1-222ENST00000557356 HOXD10P28358 340 aa9.39□□□□□ -0.91
PSEN1-222ENST00000557356 TDO2P48775 406 aa9.39□□□□□ -0.91
PSEN1-222ENST00000557356 PLCD1P51178 756 aa9.39□□□□□ -0.91
PSEN1-222ENST00000557356 USP14P54578 494 aa9.39□□□□□ -0.91
PSEN1-222ENST00000557356 BACE1P56817 501 aa9.39□□□□□ -0.91
PSEN1-222ENST00000557356 IRX6P78412 446 aaPredicted RBP9.39□□□□□ -0.91
PSEN1-222ENST00000557356 GABPAQ06546 454 aa9.39□□□□□ -0.91
PSEN1-222ENST00000557356 DGKZQ13574 1117 aa9.39□□□□□ -0.91
PSEN1-222ENST00000557356 GADL1Q6ZQY3 521 aa9.39□□□□□ -0.91
PSEN1-222ENST00000557356 FAM43AQ8N2R8 423 aa9.39□□□□□ -0.91
PSEN1-222ENST00000557356 RILPL2Q969X0 211 aa9.39□□□□□ -0.91
PSEN1-222ENST00000557356 ZBTB21Q9ULJ3 1066 aa9.39□□□□□ -0.91
PSEN1-222ENST00000557356 AGTPBP1Q9UPW5 1226 aa9.39□□□□□ -0.91
PSEN1-222ENST00000557356 DOCK2Q92608 1830 aa9.38□□□□□ -0.91
PSEN1-222ENST00000557356 GSG1L2A8MUP6 293 aa9.38□□□□□ -0.91
PSEN1-222ENST00000557356 PRKAB2O43741 272 aa9.38□□□□□ -0.91
PSEN1-222ENST00000557356 GH2P01242 217 aa9.38□□□□□ -0.91
PSEN1-222ENST00000557356 GCLCP48506 637 aaPredicted RBP9.38□□□□□ -0.91
PSEN1-222ENST00000557356 PRMT2P55345 433 aa9.38□□□□□ -0.91
PSEN1-222ENST00000557356 MCMDC2Q4G0Z9 681 aa9.38□□□□□ -0.91
PSEN1-222ENST00000557356 PPP4R3BQ5MIZ7 849 aa9.38□□□□□ -0.91
PSEN1-222ENST00000557356 CTR9Q6PD62 1173 aa9.38□□□□□ -0.91
PSEN1-222ENST00000557356 USP17L2Q6R6M4 530 aa9.38□□□□□ -0.91
PSEN1-222ENST00000557356 TMEM179Q6ZVK1 233 aa9.38□□□□□ -0.91
PSEN1-222ENST00000557356 IFNL3Q8IZI9 196 aa9.38□□□□□ -0.91
PSEN1-222ENST00000557356 SMCR8Q8TEV9 937 aaPredicted RBP9.38□□□□□ -0.91
PSEN1-222ENST00000557356 GTF3C2Q8WUA4 911 aaPredicted RBP9.38□□□□□ -0.91
PSEN1-222ENST00000557356 FEZ1Q99689 392 aa9.38□□□□□ -0.91
PSEN1-222ENST00000557356 KIAA1683Q9H0B3 1180 aa9.38□□□□□ -0.91
PSEN1-222ENST00000557356 NAPBQ9H115 298 aa9.38□□□□□ -0.91
PSEN1-222ENST00000557356 SH2D4AQ9H788 454 aa9.38□□□□□ -0.91
PSEN1-222ENST00000557356 DNAJC18Q9H819 358 aa9.38□□□□□ -0.91
PSEN1-222ENST00000557356 MKNK2Q9HBH9 465 aa9.38□□□□□ -0.91
PSEN1-222ENST00000557356 MINDY4BA8MYZ0 360 aa9.37□□□□□ -0.91
PSEN1-222ENST00000557356 MPHOSPH10O00566 681 aaKnown RBP9.37□□□□□ -0.91
PSEN1-222ENST00000557356 GDF11O95390 407 aa9.37□□□□□ -0.91
PSEN1-222ENST00000557356 HOXA7P31268 230 aaPredicted RBP9.37□□□□□ -0.91
PSEN1-222ENST00000557356 SHMT1P34896 483 aa9.37□□□□□ -0.91
PSEN1-222ENST00000557356 CDK8P49336 464 aa9.37□□□□□ -0.91
PSEN1-222ENST00000557356 IRX3P78415 501 aaPredicted RBP9.37□□□□□ -0.91
PSEN1-222ENST00000557356 PDE4BQ07343 736 aa9.37□□□□□ -0.91
PSEN1-222ENST00000557356 RAB3GAP1Q15042 981 aa9.37□□□□□ -0.91
PSEN1-222ENST00000557356 IFFO2Q5TF58 517 aa9.37□□□□□ -0.91
PSEN1-222ENST00000557356 GPAT2Q6NUI2 795 aa9.37□□□□□ -0.91
PSEN1-222ENST00000557356 C16orf86Q6ZW13 317 aa9.37□□□□□ -0.91
PSEN1-222ENST00000557356 CENPQQ7L2Z9 268 aaPredicted RBP9.37□□□□□ -0.91
PSEN1-222ENST00000557356 ZNF444Q8N0Y2 327 aaPredicted RBP9.37□□□□□ -0.91
PSEN1-222ENST00000557356 RUFY2Q8WXA3 655 aa9.37□□□□□ -0.91
PSEN1-222ENST00000557356 KANSL2Q9H9L4 492 aa9.37□□□□□ -0.91
PSEN1-222ENST00000557356 EFCC1Q9HA90 598 aa9.37□□□□□ -0.91
PSEN1-222ENST00000557356 ARHGEF10LQ9HCE6 1279 aa9.37□□□□□ -0.91
PSEN1-222ENST00000557356 DIAPH3Q9NSV4 1193 aa9.37□□□□□ -0.91
PSEN1-222ENST00000557356 SDSP20132 328 aa9.36□□□□□ -0.91
PSEN1-222ENST00000557356 NT5C2P49902 561 aa9.36□□□□□ -0.91
PSEN1-222ENST00000557356 HMGCS2P54868 508 aa9.36□□□□□ -0.91
PSEN1-222ENST00000557356 MTMR2Q13614 643 aa9.36□□□□□ -0.91
PSEN1-222ENST00000557356 MOGSQ13724 837 aa9.36□□□□□ -0.91
PSEN1-222ENST00000557356 RRP1BQ14684 758 aaKnown RBP9.36□□□□□ -0.91
PSEN1-222ENST00000557356 ALX1Q15699 326 aa9.36□□□□□ -0.91
PSEN1-222ENST00000557356 SLC4A8Q2Y0W8 1093 aa9.36□□□□□ -0.91
PSEN1-222ENST00000557356 SLFNL1Q499Z3 407 aa9.36□□□□□ -0.91
PSEN1-222ENST00000557356 FBXO46Q6PJ61 603 aaPredicted RBP9.36□□□□□ -0.91
PSEN1-222ENST00000557356 C17orf99Q6UX52 265 aa9.36□□□□□ -0.91
PSEN1-222ENST00000557356 MCOLN1Q9GZU1 580 aa9.36□□□□□ -0.91
PSEN1-222ENST00000557356 USP17L15C9J2P7 530 aa9.35□□□□□ -0.91
PSEN1-222ENST00000557356 USP17L13C9JLJ4 530 aa9.35□□□□□ -0.91
PSEN1-222ENST00000557356 USP17L11C9JVI0 530 aa9.35□□□□□ -0.91
PSEN1-222ENST00000557356 USP17L18D6R9N7 530 aa9.35□□□□□ -0.91
PSEN1-222ENST00000557356 USP17L22D6RA61 530 aa9.35□□□□□ -0.91
PSEN1-222ENST00000557356 USP17L17D6RBQ6 530 aa9.35□□□□□ -0.91
PSEN1-222ENST00000557356 USP17L19D6RCP7 530 aa9.35□□□□□ -0.91
PSEN1-222ENST00000557356 USP17L20D6RJB6 530 aa9.35□□□□□ -0.91
PSEN1-222ENST00000557356 M0R2C6 588 aa9.35□□□□□ -0.91
PSEN1-222ENST00000557356 SLURP2P0DP57 97 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms