RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 CTSHP09668 335 aa7.79□□□□□ -1.16
VRK1-207ENST00000557352 CLCN7P51798 805 aa7.79□□□□□ -1.16
VRK1-207ENST00000557352 XPCQ01831 940 aaPredicted RBP7.79□□□□□ -1.16
VRK1-207ENST00000557352 IKZF1Q13422 519 aa7.79□□□□□ -1.16
VRK1-207ENST00000557352 SLC23A3Q6PIS1 610 aa7.79□□□□□ -1.16
VRK1-207ENST00000557352 TMC4Q7Z404 712 aa7.79□□□□□ -1.16
VRK1-207ENST00000557352 LRRN4CLQ8ND94 238 aa7.79□□□□□ -1.16
VRK1-207ENST00000557352 RIN3Q8TB24 985 aa7.79□□□□□ -1.16
VRK1-207ENST00000557352 NOC4LQ9BVI4 516 aaKnown RBP7.79□□□□□ -1.16
VRK1-207ENST00000557352 TPX2Q9ULW0 747 aaKnown RBP7.79□□□□□ -1.16
VRK1-207ENST00000557352 TLR6Q9Y2C9 796 aa7.79□□□□□ -1.16
VRK1-207ENST00000557352 TACC3Q9Y6A5 838 aa7.79□□□□□ -1.16
VRK1-207ENST00000557352 CST3P01034 146 aaPredicted RBP7.78□□□□□ -1.16
VRK1-207ENST00000557352 RLBP1P12271 317 aa7.78□□□□□ -1.16
VRK1-207ENST00000557352 ST13P50502 369 aaKnown RBP7.78□□□□□ -1.16
VRK1-207ENST00000557352 SFRP5Q5T4F7 317 aa7.78□□□□□ -1.16
VRK1-207ENST00000557352 PRAMEF13Q5VWM6 474 aa7.78□□□□□ -1.16
VRK1-207ENST00000557352 LETMD1Q6P1Q0 360 aa7.78□□□□□ -1.16
VRK1-207ENST00000557352 PRDM7Q9NQW5 492 aa7.78□□□□□ -1.16
VRK1-207ENST00000557352 USP31Q70CQ4 1352 aa7.78□□□□□ -1.16
VRK1-207ENST00000557352 PITPNM2Q9BZ72 1349 aa7.78□□□□□ -1.16
VRK1-207ENST00000557352 ZNF865P0CJ78 1059 aaPredicted RBP7.77□□□□□ -1.17
VRK1-207ENST00000557352 JAG1P78504 1218 aa7.77□□□□□ -1.17
VRK1-207ENST00000557352 ZP2Q05996 745 aa7.77□□□□□ -1.17
VRK1-207ENST00000557352 TSNAXIP1Q2TAA8 658 aa7.77□□□□□ -1.17
VRK1-207ENST00000557352 C22orf34Q6ZV56 151 aa7.77□□□□□ -1.17
VRK1-207ENST00000557352 XAGE3Q8WTP9 111 aa7.77□□□□□ -1.17
VRK1-207ENST00000557352 PGRP06401 933 aa7.76□□□□□ -1.17
VRK1-207ENST00000557352 TAGLNQ01995 201 aaKnown RBP7.76□□□□□ -1.17
VRK1-207ENST00000557352 MRPL41Q8IXM3 137 aaKnown RBP7.76□□□□□ -1.17
VRK1-207ENST00000557352 MFSD4AQ8N468 514 aa7.76□□□□□ -1.17
VRK1-207ENST00000557352 PHC3Q8NDX5 983 aa7.76□□□□□ -1.17
VRK1-207ENST00000557352 JARID2Q92833 1246 aaPredicted RBP7.76□□□□□ -1.17
VRK1-207ENST00000557352 HSPA12BQ96MM6 686 aa7.76□□□□□ -1.17
VRK1-207ENST00000557352 SEMA3GQ9NS98 782 aa7.76□□□□□ -1.17
VRK1-207ENST00000557352 TJP2Q9UDY2 1190 aa7.76□□□□□ -1.17
VRK1-207ENST00000557352 FAM155AB1AL88 458 aaPredicted RBP7.75□□□□□ -1.17
VRK1-207ENST00000557352 RPL6Q02878 288 aaKnown RBP7.75□□□□□ -1.17
VRK1-207ENST00000557352 ZNF746Q6NUN9 644 aaPredicted RBP7.75□□□□□ -1.17
VRK1-207ENST00000557352 CAPN6Q9Y6Q1 641 aa7.75□□□□□ -1.17
VRK1-207ENST00000557352 RBAK-RBAKDNI3L0D1 243 aa7.74□□□□□ -1.17
VRK1-207ENST00000557352 ZNF648Q5T619 568 aaPredicted RBP7.74□□□□□ -1.17
VRK1-207ENST00000557352 CDKAL1Q5VV42 579 aa7.74□□□□□ -1.17
VRK1-207ENST00000557352 CDH24Q86UP0 819 aa7.74□□□□□ -1.17
VRK1-207ENST00000557352 FAM168AQ92567 244 aa7.74□□□□□ -1.17
VRK1-207ENST00000557352 CRELD1Q96HD1 420 aa7.74□□□□□ -1.17
VRK1-207ENST00000557352 TMEM87BQ96K49 555 aa7.74□□□□□ -1.17
VRK1-207ENST00000557352 DPH2Q9BQC3 489 aaPredicted RBP7.74□□□□□ -1.17
VRK1-207ENST00000557352 ATP13A1Q9HD20 1204 aa7.74□□□□□ -1.17
VRK1-207ENST00000557352 ST14Q9Y5Y6 855 aa7.74□□□□□ -1.17
VRK1-207ENST00000557352 F6X3S4 739 aa7.73□□□□□ -1.17
VRK1-207ENST00000557352 SORBS3O60504 671 aa7.73□□□□□ -1.17
VRK1-207ENST00000557352 CBX7O95931 251 aa7.73□□□□□ -1.17
VRK1-207ENST00000557352 PDE4BQ07343 736 aa7.73□□□□□ -1.17
VRK1-207ENST00000557352 SLC6A19Q695T7 634 aa7.73□□□□□ -1.17
VRK1-207ENST00000557352 CCDC84Q86UT8 332 aaPredicted RBP7.73□□□□□ -1.17
VRK1-207ENST00000557352 FLAD1Q8NFF5 587 aa7.73□□□□□ -1.17
VRK1-207ENST00000557352 LMCD1Q9NZU5 365 aa7.73□□□□□ -1.17
VRK1-207ENST00000557352 H3BS24 57 aa7.72□□□□□ -1.17
VRK1-207ENST00000557352 CYP7A1P22680 504 aa7.72□□□□□ -1.17
VRK1-207ENST00000557352 MCATQ8IVS2 390 aaKnown RBP7.72□□□□□ -1.17
VRK1-207ENST00000557352 ACSF2Q96CM8 615 aaPredicted RBP7.72□□□□□ -1.17
VRK1-207ENST00000557352 GZF1Q9H116 711 aaPredicted RBP7.72□□□□□ -1.17
VRK1-207ENST00000557352 CARS2Q9HA77 564 aaKnown RBP7.72□□□□□ -1.17
VRK1-207ENST00000557352 ADAM30Q9UKF2 790 aa7.72□□□□□ -1.17
VRK1-207ENST00000557352 CORINQ9Y5Q5 1042 aa7.72□□□□□ -1.17
VRK1-207ENST00000557352 CILPO75339 1184 aa7.71□□□□□ -1.18
VRK1-207ENST00000557352 ERCC3P19447 782 aa7.71□□□□□ -1.18
VRK1-207ENST00000557352 LMNB2Q03252 620 aa7.71□□□□□ -1.18
VRK1-207ENST00000557352 CAMK2GQ13555 558 aaPredicted RBP7.71□□□□□ -1.18
VRK1-207ENST00000557352 CCDC27Q2M243 656 aa7.71□□□□□ -1.18
VRK1-207ENST00000557352 BNC2Q6ZN30 1099 aaPredicted RBP7.71□□□□□ -1.18
VRK1-207ENST00000557352 TMEM40Q8WWA1 233 aa7.71□□□□□ -1.18
VRK1-207ENST00000557352 COX4I2Q96KJ9 171 aa7.71□□□□□ -1.18
VRK1-207ENST00000557352 VTI1BQ9UEU0 232 aa7.71□□□□□ -1.18
VRK1-207ENST00000557352 FAM221AA4D161 298 aa7.7□□□□□ -1.18
VRK1-207ENST00000557352 PF4P02776 101 aa7.7□□□□□ -1.18
VRK1-207ENST00000557352 KIR3DL1P43629 444 aa7.7□□□□□ -1.18
VRK1-207ENST00000557352 TNK2Q07912 1038 aa7.7□□□□□ -1.18
VRK1-207ENST00000557352 THAP5Q7Z6K1 395 aa7.7□□□□□ -1.18
VRK1-207ENST00000557352 MRS2Q9HD23 443 aa7.7□□□□□ -1.18
VRK1-207ENST00000557352 CTNND2Q9UQB3 1225 aa7.7□□□□□ -1.18
VRK1-207ENST00000557352 F13A1P00488 732 aa7.69□□□□□ -1.18
VRK1-207ENST00000557352 ETV3P41162 512 aa7.69□□□□□ -1.18
VRK1-207ENST00000557352 ZNF124Q15973 351 aa7.69□□□□□ -1.18
VRK1-207ENST00000557352 DIEXFQ68CQ4 756 aaKnown RBP7.69□□□□□ -1.18
VRK1-207ENST00000557352 DNAJB8Q8NHS0 232 aa7.69□□□□□ -1.18
VRK1-207ENST00000557352 GATAD2BQ8WXI9 593 aa7.69□□□□□ -1.18
VRK1-207ENST00000557352 UBE2FQ969M7 185 aa7.69□□□□□ -1.18
VRK1-207ENST00000557352 RHOVQ96L33 236 aa7.69□□□□□ -1.18
VRK1-207ENST00000557352 RSRP1Q9BUV0 290 aa7.69□□□□□ -1.18
VRK1-207ENST00000557352 FARP2O94887 1054 aaPredicted RBP7.68□□□□□ -1.18
VRK1-207ENST00000557352 BPNT1O95861 308 aa7.68□□□□□ -1.18
VRK1-207ENST00000557352 PLCG1P19174 1290 aa7.68□□□□□ -1.18
VRK1-207ENST00000557352 LCE1DQ5T752 114 aa7.68□□□□□ -1.18
VRK1-207ENST00000557352 RELL1Q8IUW5 271 aa7.68□□□□□ -1.18
VRK1-207ENST00000557352 TMEM74Q96NL1 305 aa7.68□□□□□ -1.18
VRK1-207ENST00000557352 ZSWIM5Q9P217 1185 aa7.68□□□□□ -1.18
VRK1-207ENST00000557352 CEP131Q9UPN4 1083 aa7.68□□□□□ -1.18
VRK1-207ENST00000557352 UPK3BL1B0FP48 263 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms