RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 EMILIN3Q9NT22 766 aa15.56■□□□□ 0.08
PSEN1-221ENST00000557293 HERC5Q9UII4 1024 aaKnown RBP15.56■□□□□ 0.08
PSEN1-221ENST00000557293 SIPA1L1O43166 1804 aa15.56■□□□□ 0.08
PSEN1-221ENST00000557293 C19orf81C9J6K1 198 aa15.55■□□□□ 0.08
PSEN1-221ENST00000557293 CNMDO75829 334 aa15.55■□□□□ 0.08
PSEN1-221ENST00000557293 UBTFL1P0CB47 393 aaPredicted RBP15.55■□□□□ 0.08
PSEN1-221ENST00000557293 RGS2P41220 211 aa15.55■□□□□ 0.08
PSEN1-221ENST00000557293 TFCP2Q12800 502 aa15.55■□□□□ 0.08
PSEN1-221ENST00000557293 SHHQ15465 462 aa15.55■□□□□ 0.08
PSEN1-221ENST00000557293 PLEKHH3Q7Z736 793 aa15.55■□□□□ 0.08
PSEN1-221ENST00000557293 SH3RF3Q8TEJ3 882 aaPredicted RBP15.55■□□□□ 0.08
PSEN1-221ENST00000557293 PRDM6Q9NQX0 595 aa15.55■□□□□ 0.08
PSEN1-221ENST00000557293 MAP2K5Q13163 448 aa15.54■□□□□ 0.08
PSEN1-221ENST00000557293 APBA2Q99767 749 aa15.54■□□□□ 0.08
PSEN1-221ENST00000557293 TMOD4Q9NZQ9 345 aa15.54■□□□□ 0.08
PSEN1-221ENST00000557293 PI4KBQ9UBF8 816 aa15.54■□□□□ 0.08
PSEN1-221ENST00000557293 USP17L10C9JJH3 530 aa15.53■□□□□ 0.08
PSEN1-221ENST00000557293 ASNSP08243 561 aa15.53■□□□□ 0.08
PSEN1-221ENST00000557293 ATN1P54259 1190 aaPredicted RBP15.53■□□□□ 0.08
PSEN1-221ENST00000557293 PDE3AQ14432 1141 aa15.53■□□□□ 0.08
PSEN1-221ENST00000557293 C9orf50Q5SZB4 431 aa15.53■□□□□ 0.08
PSEN1-221ENST00000557293 ZNF697Q5TEC3 545 aa15.53■□□□□ 0.08
PSEN1-221ENST00000557293 TEX11Q8IYF3 940 aa15.53■□□□□ 0.08
PSEN1-221ENST00000557293 TRPV1Q8NER1 839 aa15.53■□□□□ 0.08
PSEN1-221ENST00000557293 EDC3Q96F86 508 aaKnown RBP15.53■□□□□ 0.08
PSEN1-221ENST00000557293 LBHD1Q9BQE6 289 aaPredicted RBP15.53■□□□□ 0.08
PSEN1-221ENST00000557293 PAGR1Q9BTK6 254 aa15.53■□□□□ 0.08
PSEN1-221ENST00000557293 TTYH1Q9H313 450 aaPredicted RBP15.53■□□□□ 0.08
PSEN1-221ENST00000557293 RTP1P59025 263 aa15.52■□□□□ 0.08
PSEN1-221ENST00000557293 GSTO1P78417 241 aa15.52■□□□□ 0.08
PSEN1-221ENST00000557293 MVPQ14764 893 aaKnown RBP15.52■□□□□ 0.08
PSEN1-221ENST00000557293 FOXP4Q8IVH2 680 aaPredicted RBP15.52■□□□□ 0.08
PSEN1-221ENST00000557293 SPATA5Q8NB90 893 aa15.52■□□□□ 0.08
PSEN1-221ENST00000557293 MAFAQ8NHW3 353 aaPredicted RBP15.52■□□□□ 0.08
PSEN1-221ENST00000557293 DHX36Q9H2U1 1008 aaKnown RBP15.52■□□□□ 0.08
PSEN1-221ENST00000557293 NDUFB9Q9Y6M9 179 aa15.52■□□□□ 0.08
PSEN1-221ENST00000557293 GDF11O95390 407 aa15.51■□□□□ 0.07
PSEN1-221ENST00000557293 ARID4AP29374 1257 aaPredicted RBP15.51■□□□□ 0.07
PSEN1-221ENST00000557293 PPP4CP60510 307 aa15.51■□□□□ 0.07
PSEN1-221ENST00000557293 ALDH1L2Q3SY69 923 aa15.51■□□□□ 0.07
PSEN1-221ENST00000557293 NPLOC4Q8TAT6 608 aa15.51■□□□□ 0.07
PSEN1-221ENST00000557293 MYLIPQ8WY64 445 aa15.51■□□□□ 0.07
PSEN1-221ENST00000557293 LPAR1Q92633 364 aa15.51■□□□□ 0.07
PSEN1-221ENST00000557293 RAI14Q9P0K7 980 aa15.51■□□□□ 0.07
PSEN1-221ENST00000557293 DDX20Q9UHI6 824 aaKnown RBP15.51■□□□□ 0.07
PSEN1-221ENST00000557293 AKAP2Q9Y2D5 859 aa15.51■□□□□ 0.07
PSEN1-221ENST00000557293 RABGAP1Q9Y3P9 1069 aa15.51■□□□□ 0.07
PSEN1-221ENST00000557293 FRMPD3Q5JV73 1810 aa15.51■□□□□ 0.07
PSEN1-221ENST00000557293 MAST2Q6P0Q8 1798 aa15.51■□□□□ 0.07
PSEN1-221ENST00000557293 SLC15A5A6NIM6 579 aa15.5■□□□□ 0.07
PSEN1-221ENST00000557293 HOXC6P09630 235 aa15.5■□□□□ 0.07
PSEN1-221ENST00000557293 PTPREP23469 700 aa15.5■□□□□ 0.07
PSEN1-221ENST00000557293 MCAMP43121 646 aa15.5■□□□□ 0.07
PSEN1-221ENST00000557293 MFSD14CQ5VZR4 134 aa15.5■□□□□ 0.07
PSEN1-221ENST00000557293 FAM9BQ8IZU0 186 aa15.5■□□□□ 0.07
PSEN1-221ENST00000557293 TGFBRAP1Q8WUH2 860 aa15.5■□□□□ 0.07
PSEN1-221ENST00000557293 NEUROD6Q96NK8 337 aa15.5■□□□□ 0.07
PSEN1-221ENST00000557293 MEIS3Q99687 375 aa15.5■□□□□ 0.07
PSEN1-221ENST00000557293 GINM1Q9NU53 330 aa15.5■□□□□ 0.07
PSEN1-221ENST00000557293 PALD1Q9ULE6 856 aa15.5■□□□□ 0.07
PSEN1-221ENST00000557293 ZBTB21Q9ULJ3 1066 aa15.5■□□□□ 0.07
PSEN1-221ENST00000557293 LAMA2P24043 3122 aaKnown RBP15.5■□□□□ 0.07
PSEN1-221ENST00000557293 LTBP2Q14767 1821 aa15.5■□□□□ 0.07
PSEN1-221ENST00000557293 DNAH12Q6ZR08 3092 aa15.49■□□□□ 0.07
PSEN1-221ENST00000557293 DNM1LO00429 736 aa15.49■□□□□ 0.07
PSEN1-221ENST00000557293 CYP2C19P33261 490 aa15.49■□□□□ 0.07
PSEN1-221ENST00000557293 SLFN5Q08AF3 891 aa15.49■□□□□ 0.07
PSEN1-221ENST00000557293 USP17L2Q6R6M4 530 aa15.49■□□□□ 0.07
PSEN1-221ENST00000557293 SLC39A5Q6ZMH5 540 aa15.49■□□□□ 0.07
PSEN1-221ENST00000557293 ADGRA1Q86SQ6 560 aa15.49■□□□□ 0.07
PSEN1-221ENST00000557293 MAPKAPK5Q8IW41 473 aa15.49■□□□□ 0.07
PSEN1-221ENST00000557293 GTF3C2Q8WUA4 911 aaPredicted RBP15.49■□□□□ 0.07
PSEN1-221ENST00000557293 C12orf42Q96LP6 360 aa15.49■□□□□ 0.07
PSEN1-221ENST00000557293 BTBD7Q9P203 1132 aa15.49■□□□□ 0.07
PSEN1-221ENST00000557293 SMAD3P84022 425 aaKnown RBP15.48■□□□□ 0.07
PSEN1-221ENST00000557293 MTX1Q13505 466 aa15.48■□□□□ 0.07
PSEN1-221ENST00000557293 GJC2Q5T442 439 aaPredicted RBP15.48■□□□□ 0.07
PSEN1-221ENST00000557293 CATSPERGQ6ZRH7 1159 aa15.48■□□□□ 0.07
PSEN1-221ENST00000557293 SH3RF1Q7Z6J0 888 aa15.48■□□□□ 0.07
PSEN1-221ENST00000557293 CCAR1Q8IX12 1150 aaKnown RBP15.48■□□□□ 0.07
PSEN1-221ENST00000557293 BADQ92934 168 aa15.48■□□□□ 0.07
PSEN1-221ENST00000557293 AATFQ9NY61 560 aaKnown RBP eCLIP15.48■□□□□ 0.07
PSEN1-221ENST00000557293 RLFQ13129 1914 aa15.47■□□□□ 0.07
PSEN1-221ENST00000557293 TRIM43BA6NCK2 446 aa15.47■□□□□ 0.07
PSEN1-221ENST00000557293 USP17L15C9J2P7 530 aa15.47■□□□□ 0.07
PSEN1-221ENST00000557293 USP17L13C9JLJ4 530 aa15.47■□□□□ 0.07
PSEN1-221ENST00000557293 USP17L11C9JVI0 530 aa15.47■□□□□ 0.07
PSEN1-221ENST00000557293 USP17L18D6R9N7 530 aa15.47■□□□□ 0.07
PSEN1-221ENST00000557293 USP17L22D6RA61 530 aa15.47■□□□□ 0.07
PSEN1-221ENST00000557293 USP17L17D6RBQ6 530 aa15.47■□□□□ 0.07
PSEN1-221ENST00000557293 USP17L19D6RCP7 530 aa15.47■□□□□ 0.07
PSEN1-221ENST00000557293 USP17L20D6RJB6 530 aa15.47■□□□□ 0.07
PSEN1-221ENST00000557293 CYBAP13498 195 aa15.47■□□□□ 0.07
PSEN1-221ENST00000557293 CNGA1P29973 690 aa15.47■□□□□ 0.07
PSEN1-221ENST00000557293 ATP2B2Q01814 1243 aa15.47■□□□□ 0.07
PSEN1-221ENST00000557293 USP17L24Q0WX57 530 aa15.47■□□□□ 0.07
PSEN1-221ENST00000557293 GRB14Q14449 540 aa15.47■□□□□ 0.07
PSEN1-221ENST00000557293 SNX17Q15036 470 aa15.47■□□□□ 0.07
PSEN1-221ENST00000557293 LBX2Q6XYB7 198 aa15.47■□□□□ 0.07
PSEN1-221ENST00000557293 TRIM43Q96BQ3 446 aaPredicted RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 140.4 ms