RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 HOXA7P31268 230 aaPredicted RBP19.35■□□□□ 0.69
TUBB3-213ENST00000557262 USP5P45974 858 aa19.35■□□□□ 0.69
TUBB3-213ENST00000557262 MTMR2Q13614 643 aa19.35■□□□□ 0.69
TUBB3-213ENST00000557262 UNC93B1Q9H1C4 597 aa19.35■□□□□ 0.69
TUBB3-213ENST00000557262 IL1RAPL2Q9NP60 686 aa19.35■□□□□ 0.69
TUBB3-213ENST00000557262 MYO5AQ9Y4I1 1855 aaKnown RBP19.35■□□□□ 0.69
TUBB3-213ENST00000557262 MAST2Q6P0Q8 1798 aa19.34■□□□□ 0.69
TUBB3-213ENST00000557262 USP17L10C9JJH3 530 aa19.34■□□□□ 0.69
TUBB3-213ENST00000557262 GDF11O95390 407 aa19.34■□□□□ 0.69
TUBB3-213ENST00000557262 U2AF1L4Q8WU68 220 aaKnown RBP19.34■□□□□ 0.69
TUBB3-213ENST00000557262 ATAD5Q96QE3 1844 aa19.33■□□□□ 0.69
TUBB3-213ENST00000557262 HMMRO75330 724 aa19.33■□□□□ 0.68
TUBB3-213ENST00000557262 SGPL1O95470 568 aa19.33■□□□□ 0.68
TUBB3-213ENST00000557262 INHAP05111 366 aa19.33■□□□□ 0.68
TUBB3-213ENST00000557262 CAPN2P17655 700 aa19.33■□□□□ 0.68
TUBB3-213ENST00000557262 IRX3P78415 501 aaPredicted RBP19.33■□□□□ 0.68
TUBB3-213ENST00000557262 TTF1Q15361 905 aaPredicted RBP19.33■□□□□ 0.68
TUBB3-213ENST00000557262 TTC6Q86TZ1 520 aa19.33■□□□□ 0.68
TUBB3-213ENST00000557262 CLASRPQ8N2M8 674 aaKnown RBP19.33■□□□□ 0.68
TUBB3-213ENST00000557262 KIF1BPQ96EK5 621 aa19.33■□□□□ 0.68
TUBB3-213ENST00000557262 P2RX7Q99572 595 aaKnown RBP19.33■□□□□ 0.68
TUBB3-213ENST00000557262 MORF4L1Q9UBU8 362 aa19.33■□□□□ 0.68
TUBB3-213ENST00000557262 TAOK2Q9UL54 1235 aa19.33■□□□□ 0.68
TUBB3-213ENST00000557262 ZBTB21Q9ULJ3 1066 aa19.33■□□□□ 0.68
TUBB3-213ENST00000557262 DDX19BQ9UMR2 479 aa19.33■□□□□ 0.68
TUBB3-213ENST00000557262 SIPA1L1O43166 1804 aa19.32■□□□□ 0.68
TUBB3-213ENST00000557262 SHROOM1Q2M3G4 852 aaPredicted RBP19.32■□□□□ 0.68
TUBB3-213ENST00000557262 TATDN1Q6P1N9 297 aa19.32■□□□□ 0.68
TUBB3-213ENST00000557262 UBE2Q1Q7Z7E8 422 aa19.32■□□□□ 0.68
TUBB3-213ENST00000557262 DPF3Q92784 378 aa19.32■□□□□ 0.68
TUBB3-213ENST00000557262 ZBTB40Q9NUA8 1239 aa19.32■□□□□ 0.68
TUBB3-213ENST00000557262 GJD2Q9UKL4 321 aa19.32■□□□□ 0.68
TUBB3-213ENST00000557262 COG6Q9Y2V7 657 aa19.32■□□□□ 0.68
TUBB3-213ENST00000557262 CDK5RAP2Q96SN8 1893 aa19.31■□□□□ 0.68
TUBB3-213ENST00000557262 EHD4Q9H223 541 aa19.31■□□□□ 0.68
TUBB3-213ENST00000557262 CHMP4BQ9H444 224 aaKnown RBP19.31■□□□□ 0.68
TUBB3-213ENST00000557262 SERPINB13Q9UIV8 391 aa19.31■□□□□ 0.68
TUBB3-213ENST00000557262 LOC285556D6RIA3 1793 aa19.31■□□□□ 0.68
TUBB3-213ENST00000557262 FOCADQ5VW36 1801 aa19.3■□□□□ 0.68
TUBB3-213ENST00000557262 H0YGN5 161 aa19.3■□□□□ 0.68
TUBB3-213ENST00000557262 APBB1O00213 710 aa19.3■□□□□ 0.68
TUBB3-213ENST00000557262 GH2P01242 217 aa19.3■□□□□ 0.68
TUBB3-213ENST00000557262 TFRCP02786 760 aaKnown RBP19.3■□□□□ 0.68
TUBB3-213ENST00000557262 IFIT2P09913 472 aaKnown RBP19.3■□□□□ 0.68
TUBB3-213ENST00000557262 USP17L2Q6R6M4 530 aa19.3■□□□□ 0.68
TUBB3-213ENST00000557262 SIRT2Q8IXJ6 389 aa19.3■□□□□ 0.68
TUBB3-213ENST00000557262 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.3■□□□□ 0.68
TUBB3-213ENST00000557262 RIOK1Q9BRS2 568 aaKnown RBP19.3■□□□□ 0.68
TUBB3-213ENST00000557262 HTATIP2Q9BUP3 242 aa19.3■□□□□ 0.68
TUBB3-213ENST00000557262 EMILIN3Q9NT22 766 aa19.3■□□□□ 0.68
TUBB3-213ENST00000557262 DOCK3Q8IZD9 2030 aa19.29■□□□□ 0.68
TUBB3-213ENST00000557262 MAGEB6P1A0A0J9YX57 407 aa19.29■□□□□ 0.68
TUBB3-213ENST00000557262 RAB11FIP3O75154 756 aa19.29■□□□□ 0.68
TUBB3-213ENST00000557262 HERVK_113P62684 666 aa19.29■□□□□ 0.68
TUBB3-213ENST00000557262 SLC9C2Q5TAH2 1124 aa19.29■□□□□ 0.68
TUBB3-213ENST00000557262 GPRC5AQ8NFJ5 357 aa19.29■□□□□ 0.68
TUBB3-213ENST00000557262 DEFB118Q96PH6 123 aa19.29■□□□□ 0.68
TUBB3-213ENST00000557262 COLQQ9Y215 455 aaPredicted RBP19.29■□□□□ 0.68
TUBB3-213ENST00000557262 FARP2O94887 1054 aaPredicted RBP19.28■□□□□ 0.68
TUBB3-213ENST00000557262 CERKLQ49MI3 558 aaPredicted RBP19.28■□□□□ 0.68
TUBB3-213ENST00000557262 PAK6Q9NQU5 681 aaPredicted RBP19.28■□□□□ 0.68
TUBB3-213ENST00000557262 RBPJLQ9UBG7 517 aa19.28■□□□□ 0.68
TUBB3-213ENST00000557262 POLR3DP05423 398 aaPredicted RBP19.27■□□□□ 0.68
TUBB3-213ENST00000557262 PDE6AP16499 860 aa19.27■□□□□ 0.68
TUBB3-213ENST00000557262 PLCD1P51178 756 aa19.27■□□□□ 0.68
TUBB3-213ENST00000557262 ABCB5Q2M3G0 1257 aa19.27■□□□□ 0.68
TUBB3-213ENST00000557262 GTF3C2Q8WUA4 911 aaPredicted RBP19.27■□□□□ 0.68
TUBB3-213ENST00000557262 CRNKL1Q9BZJ0 848 aaKnown RBP19.27■□□□□ 0.68
TUBB3-213ENST00000557262 TXNRD2Q9NNW7 524 aa19.27■□□□□ 0.68
TUBB3-213ENST00000557262 CABP5Q9NP86 173 aa19.27■□□□□ 0.68
TUBB3-213ENST00000557262 RCAN3Q9UKA8 241 aa19.27■□□□□ 0.68
TUBB3-213ENST00000557262 CEP290O15078 2479 aa19.27■□□□□ 0.67
TUBB3-213ENST00000557262 MYH1P12882 1939 aa19.26■□□□□ 0.67
TUBB3-213ENST00000557262 GOLIM4O00461 696 aa19.26■□□□□ 0.67
TUBB3-213ENST00000557262 HMGCRP04035 888 aa19.26■□□□□ 0.67
TUBB3-213ENST00000557262 RAB3GAP1Q15042 981 aa19.26■□□□□ 0.67
TUBB3-213ENST00000557262 Q3C1V9 767 aa19.26■□□□□ 0.67
TUBB3-213ENST00000557262 C12orf42Q96LP6 360 aa19.26■□□□□ 0.67
TUBB3-213ENST00000557262 DNAJC2Q99543 621 aaKnown RBP19.26■□□□□ 0.67
TUBB3-213ENST00000557262 CRISPLD2Q9H0B8 497 aa19.26■□□□□ 0.67
TUBB3-213ENST00000557262 BCL11AQ9H165 835 aa19.26■□□□□ 0.67
TUBB3-213ENST00000557262 ZNF532Q9HCE3 1301 aa19.25■□□□□ 0.67
TUBB3-213ENST00000557262 PEX10O60683 326 aa19.25■□□□□ 0.67
TUBB3-213ENST00000557262 MAPK4P31152 587 aa19.25■□□□□ 0.67
TUBB3-213ENST00000557262 USP14P54578 494 aa19.25■□□□□ 0.67
TUBB3-213ENST00000557262 CCAR1Q8IX12 1150 aaKnown RBP19.25■□□□□ 0.67
TUBB3-213ENST00000557262 FEZ1Q99689 392 aa19.25■□□□□ 0.67
TUBB3-213ENST00000557262 NUDT12Q9BQG2 462 aa19.25■□□□□ 0.67
TUBB3-213ENST00000557262 KIAA1683Q9H0B3 1180 aa19.25■□□□□ 0.67
TUBB3-213ENST00000557262 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.25■□□□□ 0.678e-7■■■■□ 24.2
TUBB3-213ENST00000557262 NR2E3Q9Y5X4 410 aa19.25■□□□□ 0.67
TUBB3-213ENST00000557262 RPTORQ8N122 1335 aa19.25■□□□□ 0.67
TUBB3-213ENST00000557262 TCRBV5S4A2TA0A5A2 114 aa19.24■□□□□ 0.67
TUBB3-213ENST00000557262 USP17L15C9J2P7 530 aa19.24■□□□□ 0.67
TUBB3-213ENST00000557262 USP17L13C9JLJ4 530 aa19.24■□□□□ 0.67
TUBB3-213ENST00000557262 USP17L11C9JVI0 530 aa19.24■□□□□ 0.67
TUBB3-213ENST00000557262 USP17L18D6R9N7 530 aa19.24■□□□□ 0.67
TUBB3-213ENST00000557262 USP17L22D6RA61 530 aa19.24■□□□□ 0.67
TUBB3-213ENST00000557262 USP17L17D6RBQ6 530 aa19.24■□□□□ 0.67
TUBB3-213ENST00000557262 USP17L19D6RCP7 530 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms