RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 CTCFLQ8NI51 663 aaPredicted RBP14.29□□□□□ -0.12
APEX1-216ENST00000557159 EIF3CQ99613 913 aaKnown RBP14.29□□□□□ -0.12
APEX1-216ENST00000557159 RAI14Q9P0K7 980 aa14.29□□□□□ -0.12
APEX1-216ENST00000557159 TTF2Q9UNY4 1162 aaKnown RBP14.29□□□□□ -0.12
APEX1-216ENST00000557159 MAST3O60307 1309 aa14.29□□□□□ -0.12
APEX1-216ENST00000557159 AKR1B15C9JRZ8 316 aaPredicted RBP14.29□□□□□ -0.12
APEX1-216ENST00000557159 PPFIA4O75335 1185 aa14.29□□□□□ -0.12
APEX1-216ENST00000557159 CDKL5O76039 1030 aa14.29□□□□□ -0.12
APEX1-216ENST00000557159 A1BGP04217 495 aa14.29□□□□□ -0.12
APEX1-216ENST00000557159 MCM3P25205 808 aa14.29□□□□□ -0.12
APEX1-216ENST00000557159 IL15P40933 162 aaPredicted RBP14.29□□□□□ -0.12
APEX1-216ENST00000557159 GTF2A1P52655 376 aaPredicted RBP14.29□□□□□ -0.12
APEX1-216ENST00000557159 PNOCQ13519 176 aa14.29□□□□□ -0.12
APEX1-216ENST00000557159 HSP90B2PQ58FF3 399 aa14.29□□□□□ -0.12
APEX1-216ENST00000557159 LMBR1LQ6UX01 489 aa14.29□□□□□ -0.12
APEX1-216ENST00000557159 MRPL44Q9H9J2 332 aaKnown RBP14.29□□□□□ -0.12
APEX1-216ENST00000557159 JRKLQ9Y4A0 524 aa14.29□□□□□ -0.12
APEX1-216ENST00000557159 PCDHA5Q9Y5H7 936 aa14.29□□□□□ -0.12
APEX1-216ENST00000557159 TJP1Q07157 1748 aa14.28□□□□□ -0.12
APEX1-216ENST00000557159 CPLX1O14810 134 aa14.28□□□□□ -0.12
APEX1-216ENST00000557159 SEMA3EO15041 775 aa14.28□□□□□ -0.12
APEX1-216ENST00000557159 CIAO1O76071 339 aa14.28□□□□□ -0.12
APEX1-216ENST00000557159 ZFYP08048 801 aaPredicted RBP14.28□□□□□ -0.12
APEX1-216ENST00000557159 CRKLP46109 303 aaKnown RBP14.28□□□□□ -0.12
APEX1-216ENST00000557159 PIP4K2AP48426 406 aaPredicted RBP14.28□□□□□ -0.12
APEX1-216ENST00000557159 TCIRG1Q13488 830 aa14.28□□□□□ -0.12
APEX1-216ENST00000557159 CASP8Q14790 479 aa14.28□□□□□ -0.12
APEX1-216ENST00000557159 SWT1Q5T5J6 900 aaKnown RBP14.28□□□□□ -0.12
APEX1-216ENST00000557159 TTLL7Q6ZT98 887 aa14.28□□□□□ -0.12
APEX1-216ENST00000557159 FOXP4Q8IVH2 680 aaPredicted RBP14.28□□□□□ -0.12
APEX1-216ENST00000557159 FAM177A1Q8N128 213 aaPredicted RBP14.28□□□□□ -0.12
APEX1-216ENST00000557159 CNNM3Q8NE01 707 aa14.28□□□□□ -0.12
APEX1-216ENST00000557159 KCNH3Q9ULD8 1083 aa14.28□□□□□ -0.12
APEX1-216ENST00000557159 LRP5O75197 1615 aa14.28□□□□□ -0.12
APEX1-216ENST00000557159 ABCC12Q96J65 1359 aa14.28□□□□□ -0.12
APEX1-216ENST00000557159 CTAGE9A4FU28 777 aa14.27□□□□□ -0.12
APEX1-216ENST00000557159 BMP6P22004 513 aa14.27□□□□□ -0.12
APEX1-216ENST00000557159 PBX1P40424 430 aa14.27□□□□□ -0.12
APEX1-216ENST00000557159 MORC3Q14149 939 aa14.27□□□□□ -0.12
APEX1-216ENST00000557159 IMMTQ16891 758 aaKnown RBP14.27□□□□□ -0.12
APEX1-216ENST00000557159 RC3H1Q5TC82 1133 aaKnown RBP14.27□□□□□ -0.12
APEX1-216ENST00000557159 OTUD7BQ6GQQ9 843 aa14.27□□□□□ -0.12
APEX1-216ENST00000557159 KANK3Q6NY19 840 aa14.27□□□□□ -0.12
APEX1-216ENST00000557159 INTS5Q6P9B9 1019 aaKnown RBP14.27□□□□□ -0.12
APEX1-216ENST00000557159 KIF6Q6ZMV9 814 aa14.27□□□□□ -0.12
APEX1-216ENST00000557159 SPATA20Q8TB22 786 aa14.27□□□□□ -0.12
APEX1-216ENST00000557159 PNKPQ96T60 521 aa14.27□□□□□ -0.12
APEX1-216ENST00000557159 ISCA1Q9BUE6 129 aa14.27□□□□□ -0.12
APEX1-216ENST00000557159 ABCB6Q9NP58 842 aa14.27□□□□□ -0.12
APEX1-216ENST00000557159 NFE2L3Q9Y4A8 694 aa14.27□□□□□ -0.12
APEX1-216ENST00000557159 CNTNAP4Q9C0A0 1308 aa14.27□□□□□ -0.12
APEX1-216ENST00000557159 TAF1LQ8IZX4 1826 aa14.27□□□□□ -0.12
APEX1-216ENST00000557159 KLF18A0A0U1RQI7 1052 aa14.27□□□□□ -0.13
APEX1-216ENST00000557159 GOLGA8BA8MQT2 603 aa14.27□□□□□ -0.13
APEX1-216ENST00000557159 GYS2P54840 703 aa14.27□□□□□ -0.13
APEX1-216ENST00000557159 MCM6Q14566 821 aa14.27□□□□□ -0.13
APEX1-216ENST00000557159 HSP90AB3PQ58FF7 597 aa14.27□□□□□ -0.13
APEX1-216ENST00000557159 VPS37DQ86XT2 251 aa14.27□□□□□ -0.13
APEX1-216ENST00000557159 ZNF579Q8NAF0 562 aaKnown RBP14.27□□□□□ -0.13
APEX1-216ENST00000557159 NCOA7Q8NI08 942 aa14.27□□□□□ -0.13
APEX1-216ENST00000557159 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.27□□□□□ -0.13
APEX1-216ENST00000557159 AKAP2Q9Y2D5 859 aa14.27□□□□□ -0.13
APEX1-216ENST00000557159 FAN1Q9Y2M0 1017 aa14.27□□□□□ -0.13
APEX1-216ENST00000557159 ZMYM6O95789 1325 aa14.27□□□□□ -0.13
APEX1-216ENST00000557159 ITIH6Q6UXX5 1313 aa14.27□□□□□ -0.13
APEX1-216ENST00000557159 COL5A3P25940 1745 aaPredicted RBP14.26□□□□□ -0.13
APEX1-216ENST00000557159 ECM29Q5VYK3 1845 aa14.26□□□□□ -0.13
APEX1-216ENST00000557159 MYH14Q7Z406 1995 aaKnown RBP14.26□□□□□ -0.13
APEX1-216ENST00000557159 CTAGE15A4D2H0 777 aa14.26□□□□□ -0.13
APEX1-216ENST00000557159 PRC1O43663 620 aa14.26□□□□□ -0.13
APEX1-216ENST00000557159 CHGBP05060 677 aa14.26□□□□□ -0.13
APEX1-216ENST00000557159 CTAGE8P0CG41 777 aa14.26□□□□□ -0.13
APEX1-216ENST00000557159 ATP2B1P20020 1258 aa14.26□□□□□ -0.13
APEX1-216ENST00000557159 EIF5P55010 431 aaKnown RBP14.26□□□□□ -0.13
APEX1-216ENST00000557159 ADKP55263 362 aaKnown RBP14.26□□□□□ -0.13
APEX1-216ENST00000557159 PDE4BQ07343 736 aa14.26□□□□□ -0.13
APEX1-216ENST00000557159 GOLGA8FQ08AF8 430 aa14.26□□□□□ -0.13
APEX1-216ENST00000557159 GOLGA8DPQ0D2H9 430 aa14.26□□□□□ -0.13
APEX1-216ENST00000557159 LONRF3Q496Y0 759 aa14.26□□□□□ -0.13
APEX1-216ENST00000557159 LRRC31Q6UY01 552 aa14.26□□□□□ -0.13
APEX1-216ENST00000557159 CTAGE6Q86UF2 777 aa14.26□□□□□ -0.13
APEX1-216ENST00000557159 CTAGE4Q8IX94 777 aa14.26□□□□□ -0.13
APEX1-216ENST00000557159 PDILTQ8N807 584 aa14.26□□□□□ -0.13
APEX1-216ENST00000557159 CTAGE1Q96RT6 745 aa14.26□□□□□ -0.13
APEX1-216ENST00000557159 NCAPGQ9BPX3 1015 aa14.26□□□□□ -0.13
APEX1-216ENST00000557159 CCDC87Q9NVE4 849 aa14.26□□□□□ -0.13
APEX1-216ENST00000557159 MAN1B1Q9UKM7 699 aa14.26□□□□□ -0.13
APEX1-216ENST00000557159 A0A087WUV0 522 aaPredicted RBP14.25□□□□□ -0.13
APEX1-216ENST00000557159 GOLIM4O00461 696 aa14.25□□□□□ -0.13
APEX1-216ENST00000557159 MARCKSP29966 332 aaPredicted RBP14.25□□□□□ -0.13
APEX1-216ENST00000557159 POSTNQ15063 836 aa14.25□□□□□ -0.13
APEX1-216ENST00000557159 CPLX2Q6PUV4 134 aaKnown RBP14.25□□□□□ -0.13
APEX1-216ENST00000557159 PACS2Q86VP3 889 aa14.25□□□□□ -0.13
APEX1-216ENST00000557159 CNGA4Q8IV77 575 aa14.25□□□□□ -0.13
APEX1-216ENST00000557159 KRI1Q8N9T8 703 aaKnown RBP14.25□□□□□ -0.13
APEX1-216ENST00000557159 PLA2G12BQ9BX93 195 aa14.25□□□□□ -0.13
APEX1-216ENST00000557159 STK36Q9NRP7 1315 aa14.25□□□□□ -0.13
APEX1-216ENST00000557159 ZBTB1Q9Y2K1 713 aa14.25□□□□□ -0.13
APEX1-216ENST00000557159 EYA2O00167 538 aa14.25□□□□□ -0.13
APEX1-216ENST00000557159 SHOX2O60902 331 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms