RNA–Protein interactions for RNA: ENST00000557084.1

SYNE2-226, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 689 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-226ENST00000557084 MX1P20591 662 aa14.36□□□□□ -0.11
SYNE2-226ENST00000557084 HMGCS2P54868 508 aa14.36□□□□□ -0.11
SYNE2-226ENST00000557084 PABPC4Q13310 644 aaKnown RBP eCLIP14.36□□□□□ -0.11
SYNE2-226ENST00000557084 CERKLQ49MI3 558 aaPredicted RBP14.36□□□□□ -0.11
SYNE2-226ENST00000557084 KBTBD3Q8NAB2 608 aa14.36□□□□□ -0.11
SYNE2-226ENST00000557084 PROCA1Q8NCQ7 364 aaPredicted RBP14.36□□□□□ -0.11
SYNE2-226ENST00000557084 SDR42E1Q8WUS8 393 aa14.36□□□□□ -0.11
SYNE2-226ENST00000557084 DNAJC18Q9H819 358 aa14.36□□□□□ -0.11
SYNE2-226ENST00000557084 CABP5Q9NP86 173 aa14.36□□□□□ -0.11
SYNE2-226ENST00000557084 ATP8A2Q9NTI2 1148 aa14.36□□□□□ -0.11
SYNE2-226ENST00000557084 PNMA3Q9UL41 463 aa14.36□□□□□ -0.11
SYNE2-226ENST00000557084 ZBTB21Q9ULJ3 1066 aa14.36□□□□□ -0.11
SYNE2-226ENST00000557084 AGTPBP1Q9UPW5 1226 aa14.36□□□□□ -0.11
SYNE2-226ENST00000557084 SLC45A1Q9Y2W3 748 aa14.36□□□□□ -0.11
SYNE2-226ENST00000557084 SUPT16HQ9Y5B9 1047 aaKnown RBP14.36□□□□□ -0.11
SYNE2-226ENST00000557084 FMNL1O95466 1100 aaPredicted RBP14.35□□□□□ -0.11
SYNE2-226ENST00000557084 GH2P01242 217 aa14.35□□□□□ -0.11
SYNE2-226ENST00000557084 ZFYP08048 801 aaPredicted RBP14.35□□□□□ -0.11
SYNE2-226ENST00000557084 PLCD1P51178 756 aa14.35□□□□□ -0.11
SYNE2-226ENST00000557084 LACTBP83111 547 aaPredicted RBP14.35□□□□□ -0.11
SYNE2-226ENST00000557084 MTMR2Q13614 643 aa14.35□□□□□ -0.11
SYNE2-226ENST00000557084 SLFNL1Q499Z3 407 aa14.35□□□□□ -0.11
SYNE2-226ENST00000557084 C17orf99Q6UX52 265 aa14.35□□□□□ -0.11
SYNE2-226ENST00000557084 FEZ1Q99689 392 aa14.35□□□□□ -0.11
SYNE2-226ENST00000557084 WDR18Q9BV38 432 aa14.35□□□□□ -0.11
SYNE2-226ENST00000557084 DCP1AQ9NPI6 582 aaPredicted RBP14.35□□□□□ -0.11
SYNE2-226ENST00000557084 PTPN22Q9Y2R2 807 aa14.35□□□□□ -0.11
SYNE2-226ENST00000557084 SLC4A4Q9Y6R1 1079 aa14.35□□□□□ -0.11
SYNE2-226ENST00000557084 HTTP42858 3142 aa14.35□□□□□ -0.11
SYNE2-226ENST00000557084 LAMB1P07942 1786 aa14.34□□□□□ -0.11
SYNE2-226ENST00000557084 DOCK1Q14185 1865 aa14.34□□□□□ -0.11
SYNE2-226ENST00000557084 USP17L10C9JJH3 530 aa14.34□□□□□ -0.11
SYNE2-226ENST00000557084 MPHOSPH10O00566 681 aaKnown RBP14.34□□□□□ -0.11
SYNE2-226ENST00000557084 RNF113AO15541 343 aaKnown RBP14.34□□□□□ -0.11
SYNE2-226ENST00000557084 PRKAB2O43741 272 aa14.34□□□□□ -0.11
SYNE2-226ENST00000557084 OSBPP22059 807 aa14.34□□□□□ -0.11
SYNE2-226ENST00000557084 HOXD10P28358 340 aa14.34□□□□□ -0.11
SYNE2-226ENST00000557084 PSMC4P43686 418 aa14.34□□□□□ -0.11
SYNE2-226ENST00000557084 BACE1P56817 501 aa14.34□□□□□ -0.11
SYNE2-226ENST00000557084 RAB3GAP1Q15042 981 aa14.34□□□□□ -0.11
SYNE2-226ENST00000557084 ABCB5Q2M3G0 1257 aa14.34□□□□□ -0.11
SYNE2-226ENST00000557084 TATDN1Q6P1N9 297 aa14.34□□□□□ -0.11
SYNE2-226ENST00000557084 EXOC6Q8TAG9 804 aa14.34□□□□□ -0.11
SYNE2-226ENST00000557084 OTUD7AQ8TE49 926 aaPredicted RBP14.34□□□□□ -0.11
SYNE2-226ENST00000557084 FSD1Q9BTV5 496 aa14.34□□□□□ -0.11
SYNE2-226ENST00000557084 C19orf81C9J6K1 198 aa14.33□□□□□ -0.12
SYNE2-226ENST00000557084 GNRH1P01148 92 aa14.33□□□□□ -0.12
SYNE2-226ENST00000557084 SOX10P56693 466 aa14.33□□□□□ -0.12
SYNE2-226ENST00000557084 IRX3P78415 501 aaPredicted RBP14.33□□□□□ -0.12
SYNE2-226ENST00000557084 TREML2Q5T2D2 321 aa14.33□□□□□ -0.12
SYNE2-226ENST00000557084 PUS7LQ9H0K6 701 aaKnown RBP14.33□□□□□ -0.12
SYNE2-226ENST00000557084 CENPFP49454 3210 aa14.33□□□□□ -0.12
SYNE2-226ENST00000557084 CHGBP05060 677 aa14.32□□□□□ -0.12
SYNE2-226ENST00000557084 CYP2D6P10635 497 aa14.32□□□□□ -0.12
SYNE2-226ENST00000557084 JAG1P78504 1218 aa14.32□□□□□ -0.12
SYNE2-226ENST00000557084 SHROOM1Q2M3G4 852 aaPredicted RBP14.32□□□□□ -0.12
SYNE2-226ENST00000557084 B4GALNT3Q6L9W6 998 aa14.32□□□□□ -0.12
SYNE2-226ENST00000557084 NBPF11Q86T75 865 aa14.32□□□□□ -0.12
SYNE2-226ENST00000557084 APPBP2Q92624 585 aa14.32□□□□□ -0.12
SYNE2-226ENST00000557084 ARHGAP39Q9C0H5 1083 aa14.32□□□□□ -0.12
SYNE2-226ENST00000557084 SWAP70Q9UH65 585 aa14.32□□□□□ -0.12
SYNE2-226ENST00000557084 USP17L12C9JPN9 530 aa14.31□□□□□ -0.12
SYNE2-226ENST00000557084 USP17L21D6R901 530 aa14.31□□□□□ -0.12
SYNE2-226ENST00000557084 APPP05067 770 aa14.31□□□□□ -0.12
SYNE2-226ENST00000557084 SHMT1P34896 483 aa14.31□□□□□ -0.12
SYNE2-226ENST00000557084 PRMT2P55345 433 aa14.31□□□□□ -0.12
SYNE2-226ENST00000557084 FCGRTP55899 365 aa14.31□□□□□ -0.12
SYNE2-226ENST00000557084 SLC9C1Q4G0N8 1177 aa14.31□□□□□ -0.12
SYNE2-226ENST00000557084 SH3D19Q5HYK7 790 aa14.31□□□□□ -0.12
SYNE2-226ENST00000557084 USP17L2Q6R6M4 530 aa14.31□□□□□ -0.12
SYNE2-226ENST00000557084 PI4K2BQ8TCG2 481 aa14.31□□□□□ -0.12
SYNE2-226ENST00000557084 TAOK2Q9UL54 1235 aa14.31□□□□□ -0.12
SYNE2-226ENST00000557084 CDK5RAP2Q96SN8 1893 aa14.31□□□□□ -0.12
SYNE2-226ENST00000557084 MYH1P12882 1939 aa14.31□□□□□ -0.12
SYNE2-226ENST00000557084 FOCADQ5VW36 1801 aa14.3□□□□□ -0.12
SYNE2-226ENST00000557084 BCRP11274 1271 aa14.3□□□□□ -0.12
SYNE2-226ENST00000557084 GNAT2P19087 354 aa14.3□□□□□ -0.12
SYNE2-226ENST00000557084 GCLCP48506 637 aaPredicted RBP14.3□□□□□ -0.12
SYNE2-226ENST00000557084 USP14P54578 494 aa14.3□□□□□ -0.12
SYNE2-226ENST00000557084 MLLT1Q03111 559 aaPredicted RBP14.3□□□□□ -0.12
SYNE2-226ENST00000557084 ZYXQ15942 572 aaKnown RBP14.3□□□□□ -0.12
SYNE2-226ENST00000557084 ANKRD13CQ8N6S4 541 aa14.3□□□□□ -0.12
SYNE2-226ENST00000557084 RAET1EQ8TD07 263 aa14.3□□□□□ -0.12
SYNE2-226ENST00000557084 DYNLL2Q96FJ2 89 aa14.3□□□□□ -0.12
SYNE2-226ENST00000557084 TRIM47Q96LD4 638 aa14.3□□□□□ -0.12
SYNE2-226ENST00000557084 STRBPQ96SI9 672 aaKnown RBP14.3□□□□□ -0.12
SYNE2-226ENST00000557084 LNPKQ9C0E8 428 aa14.3□□□□□ -0.12
SYNE2-226ENST00000557084 ASCC2Q9H1I8 757 aaPredicted RBP14.3□□□□□ -0.12
SYNE2-226ENST00000557084 PTCH2Q9Y6C5 1203 aa14.3□□□□□ -0.12
SYNE2-226ENST00000557084 ADGRA2Q96PE1 1338 aa14.3□□□□□ -0.12
SYNE2-226ENST00000557084 CYP2D7A0A087X1C5 515 aa14.29□□□□□ -0.12
SYNE2-226ENST00000557084 GPAA1O43292 621 aa14.29□□□□□ -0.12
SYNE2-226ENST00000557084 TDO2P48775 406 aa14.29□□□□□ -0.12
SYNE2-226ENST00000557084 CAP1Q01518 475 aa14.29□□□□□ -0.12
SYNE2-226ENST00000557084 GABPAQ06546 454 aa14.29□□□□□ -0.12
SYNE2-226ENST00000557084 C12orf60Q5U649 245 aa14.29□□□□□ -0.12
SYNE2-226ENST00000557084 SLC44A5Q8NCS7 719 aa14.29□□□□□ -0.12
SYNE2-226ENST00000557084 OSBP2Q969R2 916 aa14.29□□□□□ -0.12
SYNE2-226ENST00000557084 NACAP1Q9BZK3 213 aa14.29□□□□□ -0.12
SYNE2-226ENST00000557084 ARPP21Q9UBL0 812 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms