RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 RGS22Q8NE09 1264 aa13□□□□□ -0.33
SRP54-213ENST00000556994 GOLGA1Q92805 767 aa13□□□□□ -0.33
SRP54-213ENST00000556994 EPSTI1Q96J88 318 aa13□□□□□ -0.33
SRP54-213ENST00000556994 FUT8Q9BYC5 575 aa13□□□□□ -0.33
SRP54-213ENST00000556994 UBXN6Q9BZV1 441 aa13□□□□□ -0.33
SRP54-213ENST00000556994 ASAP1Q9ULH1 1129 aa13□□□□□ -0.33
SRP54-213ENST00000556994 CD44P16070 742 aaKnown RBP12.99□□□□□ -0.33
SRP54-213ENST00000556994 CTSWP56202 376 aa12.99□□□□□ -0.33
SRP54-213ENST00000556994 RILPL1Q5EBL4 403 aa12.99□□□□□ -0.33
SRP54-213ENST00000556994 AKNAD1Q5T1N1 836 aa12.99□□□□□ -0.33
SRP54-213ENST00000556994 MFSD6Q6ZSS7 791 aa12.99□□□□□ -0.33
SRP54-213ENST00000556994 CREBRFQ8IUR6 639 aa12.99□□□□□ -0.33
SRP54-213ENST00000556994 TRIM22Q8IYM9 498 aa12.99□□□□□ -0.33
SRP54-213ENST00000556994 DACH1Q9UI36 760 aa12.99□□□□□ -0.33
SRP54-213ENST00000556994 STK36Q9NRP7 1315 aa12.99□□□□□ -0.33
SRP54-213ENST00000556994 A0A1B0GTH6 734 aa12.99□□□□□ -0.33
SRP54-213ENST00000556994 IRS4O14654 1257 aaPredicted RBP12.99□□□□□ -0.33
SRP54-213ENST00000556994 CCDC175P0C221 793 aa12.99□□□□□ -0.33
SRP54-213ENST00000556994 PLCD1P51178 756 aa12.99□□□□□ -0.33
SRP54-213ENST00000556994 WTAPQ15007 396 aa12.99□□□□□ -0.33
SRP54-213ENST00000556994 NLRP10Q86W26 655 aa12.99□□□□□ -0.33
SRP54-213ENST00000556994 IGSF22Q8N9C0 903 aa12.99□□□□□ -0.33
SRP54-213ENST00000556994 WASF1Q92558 559 aa12.99□□□□□ -0.33
SRP54-213ENST00000556994 RABGGTAQ92696 567 aa12.99□□□□□ -0.33
SRP54-213ENST00000556994 STAMQ92783 540 aa12.99□□□□□ -0.33
SRP54-213ENST00000556994 PRDM11Q9NQV5 511 aa12.99□□□□□ -0.33
SRP54-213ENST00000556994 SRPRBQ9Y5M8 271 aaKnown RBP12.99□□□□□ -0.33
SRP54-213ENST00000556994 GSG1L2A8MUP6 293 aa12.98□□□□□ -0.33
SRP54-213ENST00000556994 ATP8B1O43520 1251 aa12.98□□□□□ -0.33
SRP54-213ENST00000556994 ABL1P00519 1130 aa12.98□□□□□ -0.33
SRP54-213ENST00000556994 TXLNAP40222 546 aa12.98□□□□□ -0.33
SRP54-213ENST00000556994 LONRF2Q1L5Z9 754 aa12.98□□□□□ -0.33
SRP54-213ENST00000556994 EARS2Q5JPH6 523 aaKnown RBP12.98□□□□□ -0.33
SRP54-213ENST00000556994 APTXQ7Z2E3 356 aaKnown RBP12.98□□□□□ -0.33
SRP54-213ENST00000556994 CRACR2BQ8N4Y2 399 aaPredicted RBP12.98□□□□□ -0.33
SRP54-213ENST00000556994 FOXP1Q9H334 677 aaPredicted RBP12.98□□□□□ -0.33
SRP54-213ENST00000556994 TRMT112Q9UI30 125 aaKnown RBP12.98□□□□□ -0.33
SRP54-213ENST00000556994 ADGRG1Q9Y653 693 aa12.98□□□□□ -0.33
SRP54-213ENST00000556994 ATRNO75882 1429 aa12.98□□□□□ -0.33
SRP54-213ENST00000556994 SMIM22K7EJ46 135 aa12.97□□□□□ -0.33
SRP54-213ENST00000556994 CAPN2P17655 700 aa12.97□□□□□ -0.33
SRP54-213ENST00000556994 TDO2P48775 406 aa12.97□□□□□ -0.33
SRP54-213ENST00000556994 CHMP4BP1P59074 171 aa12.97□□□□□ -0.33
SRP54-213ENST00000556994 ZNF569Q5MCW4 686 aa12.97□□□□□ -0.33
SRP54-213ENST00000556994 GIGYF2Q6Y7W6 1299 aaKnown RBP12.97□□□□□ -0.33
SRP54-213ENST00000556994 PPFIBP1Q86W92 1011 aa12.97□□□□□ -0.33
SRP54-213ENST00000556994 ELOA2Q8IYF1 753 aaPredicted RBP12.97□□□□□ -0.33
SRP54-213ENST00000556994 MIGA1Q8NAN2 632 aa12.97□□□□□ -0.33
SRP54-213ENST00000556994 SPATA5Q8NB90 893 aa12.97□□□□□ -0.33
SRP54-213ENST00000556994 BBXQ8WY36 941 aaPredicted RBP12.97□□□□□ -0.33
SRP54-213ENST00000556994 ZNF512BQ96KM6 892 aaPredicted RBP12.97□□□□□ -0.33
SRP54-213ENST00000556994 STRN4Q9NRL3 753 aa12.97□□□□□ -0.33
SRP54-213ENST00000556994 UBR2Q8IWV8 1755 aa12.97□□□□□ -0.33
SRP54-213ENST00000556994 H3BQF6 201 aa12.97□□□□□ -0.33
SRP54-213ENST00000556994 PRDM1O75626 825 aa12.97□□□□□ -0.33
SRP54-213ENST00000556994 DEXIO95424 95 aa12.97□□□□□ -0.33
SRP54-213ENST00000556994 ARID4AP29374 1257 aaPredicted RBP12.97□□□□□ -0.33
SRP54-213ENST00000556994 CASP14P31944 242 aa12.97□□□□□ -0.33
SRP54-213ENST00000556994 LCORLQ8N3X6 602 aa12.97□□□□□ -0.33
SRP54-213ENST00000556994 SHISA4Q96DD7 197 aa12.97□□□□□ -0.33
SRP54-213ENST00000556994 TMOD3Q9NYL9 352 aa12.97□□□□□ -0.33
SRP54-213ENST00000556994 WDR17Q8IZU2 1322 aa12.97□□□□□ -0.33
SRP54-213ENST00000556994 WNT7AO00755 349 aa12.96□□□□□ -0.33
SRP54-213ENST00000556994 RASGRF1Q13972 1273 aa12.96□□□□□ -0.33
SRP54-213ENST00000556994 MCM6Q14566 821 aa12.96□□□□□ -0.33
SRP54-213ENST00000556994 ALX1Q15699 326 aa12.96□□□□□ -0.33
SRP54-213ENST00000556994 TRIML1Q8N9V2 468 aa12.96□□□□□ -0.33
SRP54-213ENST00000556994 SPATA20Q8TB22 786 aa12.96□□□□□ -0.33
SRP54-213ENST00000556994 KRT23Q9C075 422 aa12.96□□□□□ -0.33
SRP54-213ENST00000556994 SUGCTQ9HAC7 445 aa12.96□□□□□ -0.33
SRP54-213ENST00000556994 VPS54Q9P1Q0 977 aa12.96□□□□□ -0.33
SRP54-213ENST00000556994 SLC4A4Q9Y6R1 1079 aa12.96□□□□□ -0.33
SRP54-213ENST00000556994 SPATA31A3Q5VYP0 1347 aa12.96□□□□□ -0.33
SRP54-213ENST00000556994 MAP3K15Q6ZN16 1313 aa12.96□□□□□ -0.33
SRP54-213ENST00000556994 ERICH2A1L162 156 aa12.96□□□□□ -0.34
SRP54-213ENST00000556994 IL2RBP14784 551 aa12.96□□□□□ -0.34
SRP54-213ENST00000556994 CCT6AP40227 531 aaKnown RBP12.96□□□□□ -0.34
SRP54-213ENST00000556994 NKX1-1Q15270 411 aaPredicted RBP12.96□□□□□ -0.34
SRP54-213ENST00000556994 NOM1Q5C9Z4 860 aaKnown RBP12.96□□□□□ -0.34
SRP54-213ENST00000556994 SPATA1Q5VX52 437 aa12.96□□□□□ -0.34
SRP54-213ENST00000556994 TNS3Q68CZ2 1445 aa12.96□□□□□ -0.34
SRP54-213ENST00000556994 WWC2Q6AWC2 1192 aa12.96□□□□□ -0.34
SRP54-213ENST00000556994 SRGAP1Q7Z6B7 1085 aa12.96□□□□□ -0.34
SRP54-213ENST00000556994 ZNF579Q8NAF0 562 aaKnown RBP12.96□□□□□ -0.34
SRP54-213ENST00000556994 FANCBQ8NB91 859 aa12.96□□□□□ -0.34
SRP54-213ENST00000556994 ACRBPQ8NEB7 543 aa12.96□□□□□ -0.34
SRP54-213ENST00000556994 PANX2Q96RD6 677 aa12.96□□□□□ -0.34
SRP54-213ENST00000556994 CDC5LQ99459 802 aaKnown RBP12.96□□□□□ -0.34
SRP54-213ENST00000556994 CNNM2Q9H8M5 875 aa12.96□□□□□ -0.34
SRP54-213ENST00000556994 ANKZF1Q9H8Y5 726 aa12.96□□□□□ -0.34
SRP54-213ENST00000556994 SYNRGQ9UMZ2 1314 aa12.95□□□□□ -0.34
SRP54-213ENST00000556994 KIF5CO60282 957 aa12.95□□□□□ -0.34
SRP54-213ENST00000556994 UQCRFS1P1P0C7P4 283 aa12.95□□□□□ -0.34
SRP54-213ENST00000556994 ERCC5P28715 1186 aaPredicted RBP12.95□□□□□ -0.34
SRP54-213ENST00000556994 CDC25AP30304 524 aa12.95□□□□□ -0.34
SRP54-213ENST00000556994 FXR1P51114 621 aaKnown RBP eCLIP12.95□□□□□ -0.34
SRP54-213ENST00000556994 MAP3K12Q12852 859 aa12.95□□□□□ -0.34
SRP54-213ENST00000556994 MAPK8IP2Q13387 824 aaPredicted RBP12.95□□□□□ -0.34
SRP54-213ENST00000556994 KIF4BQ2VIQ3 1234 aa12.95□□□□□ -0.34
SRP54-213ENST00000556994 KANK3Q6NY19 840 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms