RNA–Protein interactions for RNA: ENST00000556929.5

TMEM260-213, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-213ENST00000556929 TBC1D10CQ8IV04 446 aa11.5□□□□□ -0.57
TMEM260-213ENST00000556929 CDAN1Q8IWY9 1227 aa11.5□□□□□ -0.57
TMEM260-213ENST00000556929 RASEFQ8IZ41 740 aa11.5□□□□□ -0.57
TMEM260-213ENST00000556929 ZNF784Q8NCA9 323 aaPredicted RBP11.5□□□□□ -0.57
TMEM260-213ENST00000556929 SMC1BQ8NDV3 1235 aa11.5□□□□□ -0.57
TMEM260-213ENST00000556929 CCDC17Q96LX7 622 aa11.5□□□□□ -0.57
TMEM260-213ENST00000556929 TBC1D32Q96NH3 1257 aa11.5□□□□□ -0.57
TMEM260-213ENST00000556929 NBPF3Q9H094 633 aa11.5□□□□□ -0.57
TMEM260-213ENST00000556929 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.5□□□□□ -0.57
TMEM260-213ENST00000556929 TSPY2A6NKD2 308 aa11.49□□□□□ -0.57
TMEM260-213ENST00000556929 SMIM22K7EJ46 135 aa11.49□□□□□ -0.57
TMEM260-213ENST00000556929 RANBP6O60518 1105 aaKnown RBP11.49□□□□□ -0.57
TMEM260-213ENST00000556929 PRDM1O75626 825 aa11.49□□□□□ -0.57
TMEM260-213ENST00000556929 TSPY3P0CV98 308 aa11.49□□□□□ -0.57
TMEM260-213ENST00000556929 TSPY8P0CW00 308 aa11.49□□□□□ -0.57
TMEM260-213ENST00000556929 SHMT1P34896 483 aa11.49□□□□□ -0.57
TMEM260-213ENST00000556929 MNX1P50219 401 aaPredicted RBP11.49□□□□□ -0.57
TMEM260-213ENST00000556929 CERKLQ49MI3 558 aaPredicted RBP11.49□□□□□ -0.57
TMEM260-213ENST00000556929 RBM46Q8TBY0 533 aaKnown RBP11.49□□□□□ -0.57
TMEM260-213ENST00000556929 JAKMIP1Q96N16 626 aaKnown RBP11.49□□□□□ -0.57
TMEM260-213ENST00000556929 TM6SF1Q9BZW5 370 aa11.49□□□□□ -0.57
TMEM260-213ENST00000556929 CABP5Q9NP86 173 aa11.49□□□□□ -0.57
TMEM260-213ENST00000556929 NEDD4P46934 1319 aa11.49□□□□□ -0.57
TMEM260-213ENST00000556929 GREB1LQ9C091 1923 aaPredicted RBP11.48□□□□□ -0.57
TMEM260-213ENST00000556929 MYH4Q9Y623 1939 aa11.48□□□□□ -0.57
TMEM260-213ENST00000556929 OTOFQ9HC10 1997 aa11.48□□□□□ -0.57
TMEM260-213ENST00000556929 FAM196BA6NMK8 535 aa11.48□□□□□ -0.57
TMEM260-213ENST00000556929 B4E1Z4 1266 aa11.48□□□□□ -0.57
TMEM260-213ENST00000556929 MPHOSPH10O00566 681 aaKnown RBP11.48□□□□□ -0.57
TMEM260-213ENST00000556929 GABBR2O75899 941 aa11.48□□□□□ -0.57
TMEM260-213ENST00000556929 RASA1P20936 1047 aa11.48□□□□□ -0.57
TMEM260-213ENST00000556929 MCM5P33992 734 aa11.48□□□□□ -0.57
TMEM260-213ENST00000556929 IREB2P48200 963 aaKnown RBP11.48□□□□□ -0.57
TMEM260-213ENST00000556929 TTLL12Q14166 644 aaPredicted RBP11.48□□□□□ -0.57
TMEM260-213ENST00000556929 ADCK5Q3MIX3 580 aa11.48□□□□□ -0.57
TMEM260-213ENST00000556929 CCDC178Q5BJE1 867 aa11.48□□□□□ -0.57
TMEM260-213ENST00000556929 BLOC1S2Q6QNY1 142 aa11.48□□□□□ -0.57
TMEM260-213ENST00000556929 STOX1Q6ZVD7 989 aa11.48□□□□□ -0.57
TMEM260-213ENST00000556929 ARMC9Q7Z3E5 817 aa11.48□□□□□ -0.57
TMEM260-213ENST00000556929 IQCA1Q86XH1 822 aa11.48□□□□□ -0.57
TMEM260-213ENST00000556929 SLC44A5Q8NCS7 719 aa11.48□□□□□ -0.57
TMEM260-213ENST00000556929 IL27Q8NEV9 243 aa11.48□□□□□ -0.57
TMEM260-213ENST00000556929 IL17RAQ96F46 866 aa11.48□□□□□ -0.57
TMEM260-213ENST00000556929 DNAJC18Q9H819 358 aa11.48□□□□□ -0.57
TMEM260-213ENST00000556929 ZNF408Q9H9D4 720 aa11.48□□□□□ -0.57
TMEM260-213ENST00000556929 INCENPQ9NQS7 918 aa11.48□□□□□ -0.57
TMEM260-213ENST00000556929 GINM1Q9NU53 330 aa11.48□□□□□ -0.57
TMEM260-213ENST00000556929 SSC5DA1L4H1 1573 aa11.48□□□□□ -0.57
TMEM260-213ENST00000556929 PAPPA2Q9BXP8 1791 aa11.48□□□□□ -0.57
TMEM260-213ENST00000556929 ERICH2A1L162 156 aa11.47□□□□□ -0.57
TMEM260-213ENST00000556929 TRAF5O00463 557 aa11.47□□□□□ -0.57
TMEM260-213ENST00000556929 CTNND1O60716 968 aaKnown RBP11.47□□□□□ -0.57
TMEM260-213ENST00000556929 KDM4AO75164 1064 aa11.47□□□□□ -0.57
TMEM260-213ENST00000556929 USP2O75604 605 aaPredicted RBP11.47□□□□□ -0.57
TMEM260-213ENST00000556929 ITGBL1O95965 494 aaPredicted RBP11.47□□□□□ -0.57
TMEM260-213ENST00000556929 SLURP2P0DP57 97 aa11.47□□□□□ -0.57
TMEM260-213ENST00000556929 CASTP20810 708 aaKnown RBP11.47□□□□□ -0.57
TMEM260-213ENST00000556929 CAP2P40123 477 aa11.47□□□□□ -0.57
TMEM260-213ENST00000556929 FKBP1BP68106 108 aa11.47□□□□□ -0.57
TMEM260-213ENST00000556929 TFAP4Q01664 338 aa11.47□□□□□ -0.57
TMEM260-213ENST00000556929 PRKG1Q13976 671 aa11.47□□□□□ -0.57
TMEM260-213ENST00000556929 SART3Q15020 963 aaKnown RBP11.47□□□□□ -0.57
TMEM260-213ENST00000556929 ABCB5Q2M3G0 1257 aa11.47□□□□□ -0.57
TMEM260-213ENST00000556929 PPP4R3BQ5MIZ7 849 aa11.47□□□□□ -0.57
TMEM260-213ENST00000556929 DLK2Q6UY11 383 aa11.47□□□□□ -0.57
TMEM260-213ENST00000556929 DHX32Q7L7V1 743 aaKnown RBP11.47□□□□□ -0.57
TMEM260-213ENST00000556929 C2orf69Q8N8R5 385 aa11.47□□□□□ -0.57
TMEM260-213ENST00000556929 KLRG1Q96E93 195 aa11.47□□□□□ -0.57
TMEM260-213ENST00000556929 MTA3Q9BTC8 594 aa11.47□□□□□ -0.57
TMEM260-213ENST00000556929 ZSWIM5Q9P217 1185 aa11.47□□□□□ -0.57
TMEM260-213ENST00000556929 ZNF112Q9UJU3 913 aa11.47□□□□□ -0.57
TMEM260-213ENST00000556929 ANGEL1Q9UNK9 670 aaKnown RBP11.47□□□□□ -0.57
TMEM260-213ENST00000556929 CYP46A1Q9Y6A2 500 aa11.47□□□□□ -0.57
TMEM260-213ENST00000556929 TACC3Q9Y6A5 838 aa11.47□□□□□ -0.57
TMEM260-213ENST00000556929 TAF6LQ9Y6J9 622 aa11.47□□□□□ -0.57
TMEM260-213ENST00000556929 WDR19Q8NEZ3 1342 aa11.46□□□□□ -0.57
TMEM260-213ENST00000556929 UNCXA6NJT0 531 aa11.46□□□□□ -0.57
TMEM260-213ENST00000556929 CELF2O95319 508 aaKnown RBP11.46□□□□□ -0.57
TMEM260-213ENST00000556929 GDF11O95390 407 aa11.46□□□□□ -0.57
TMEM260-213ENST00000556929 AKR1B1P15121 316 aa11.46□□□□□ -0.57
TMEM260-213ENST00000556929 RPS6KB1P23443 525 aa11.46□□□□□ -0.57
TMEM260-213ENST00000556929 MAP3K9P80192 1104 aa11.46□□□□□ -0.57
TMEM260-213ENST00000556929 FSTL1Q12841 308 aa11.46□□□□□ -0.57
TMEM260-213ENST00000556929 MAP3K11Q16584 847 aa11.46□□□□□ -0.57
TMEM260-213ENST00000556929 FAM47AQ5JRC9 791 aa11.46□□□□□ -0.57
TMEM260-213ENST00000556929 TMEM179Q6ZVK1 233 aa11.46□□□□□ -0.57
TMEM260-213ENST00000556929 RUFY3Q7L099 469 aa11.46□□□□□ -0.57
TMEM260-213ENST00000556929 MB21D2Q8IYB1 491 aaPredicted RBP11.46□□□□□ -0.57
TMEM260-213ENST00000556929 NEDD1Q8NHV4 660 aa11.46□□□□□ -0.57
TMEM260-213ENST00000556929 TMEM87BQ96K49 555 aa11.46□□□□□ -0.57
TMEM260-213ENST00000556929 WRNIP1Q96S55 665 aa11.46□□□□□ -0.57
TMEM260-213ENST00000556929 ZSWIM6Q9HCJ5 1215 aa11.46□□□□□ -0.57
TMEM260-213ENST00000556929 TCP11L1Q9NUJ3 509 aa11.46□□□□□ -0.57
TMEM260-213ENST00000556929 PHF20L1A8MW92 1017 aa11.45□□□□□ -0.58
TMEM260-213ENST00000556929 PRC1O43663 620 aa11.45□□□□□ -0.58
TMEM260-213ENST00000556929 ASNSP08243 561 aa11.45□□□□□ -0.58
TMEM260-213ENST00000556929 FGD1P98174 961 aa11.45□□□□□ -0.58
TMEM260-213ENST00000556929 RABEP1Q15276 862 aa11.45□□□□□ -0.58
TMEM260-213ENST00000556929 CYB5R4Q7L1T6 521 aa11.45□□□□□ -0.58
TMEM260-213ENST00000556929 ANKRD13AQ8IZ07 590 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms