RNA–Protein interactions for RNA: ENST00000556639.5

EFCAB11-212, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 2,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-212ENST00000556639 FAM198AQ9UFP1 575 aa16.18■□□□□ 0.18
EFCAB11-212ENST00000556639 F13A1P00488 732 aa16.17■□□□□ 0.18
EFCAB11-212ENST00000556639 RCSD1Q6JBY9 416 aa16.17■□□□□ 0.18
EFCAB11-212ENST00000556639 FAM173BQ6P4H8 233 aa16.17■□□□□ 0.18
EFCAB11-212ENST00000556639 C16orf86Q6ZW13 317 aa16.17■□□□□ 0.18
EFCAB11-212ENST00000556639 IQCA1Q86XH1 822 aa16.17■□□□□ 0.18
EFCAB11-212ENST00000556639 FAM184AQ8NB25 1140 aa16.17■□□□□ 0.18
EFCAB11-212ENST00000556639 VPS33BQ9H267 617 aa16.17■□□□□ 0.18
EFCAB11-212ENST00000556639 CPLX1O14810 134 aa16.17■□□□□ 0.18
EFCAB11-212ENST00000556639 GUCY1B3Q02153 619 aa16.17■□□□□ 0.18
EFCAB11-212ENST00000556639 NTRK3Q16288 839 aa16.17■□□□□ 0.18
EFCAB11-212ENST00000556639 IFIT1BQ5T764 474 aaKnown RBP16.17■□□□□ 0.18
EFCAB11-212ENST00000556639 OTUD7BQ6GQQ9 843 aa16.17■□□□□ 0.18
EFCAB11-212ENST00000556639 CCDC82Q8N4S0 544 aa16.17■□□□□ 0.18
EFCAB11-212ENST00000556639 DDTLA6NHG4 134 aaPredicted RBP16.16■□□□□ 0.18
EFCAB11-212ENST00000556639 SH3BP5LQ7L8J4 393 aa16.16■□□□□ 0.18
EFCAB11-212ENST00000556639 JDP2Q8WYK2 163 aa16.16■□□□□ 0.18
EFCAB11-212ENST00000556639 AIFM3Q96NN9 605 aa16.16■□□□□ 0.18
EFCAB11-212ENST00000556639 GDPD2Q9HCC8 539 aa16.16■□□□□ 0.18
EFCAB11-212ENST00000556639 CLRN2A0PK11 232 aa16.16■□□□□ 0.18
EFCAB11-212ENST00000556639 FAM196BA6NMK8 535 aa16.16■□□□□ 0.18
EFCAB11-212ENST00000556639 ZNF444Q8N0Y2 327 aaPredicted RBP16.16■□□□□ 0.18
EFCAB11-212ENST00000556639 MTA3Q9BTC8 594 aa16.16■□□□□ 0.18
EFCAB11-212ENST00000556639 TCHHQ07283 1943 aa16.15■□□□□ 0.18
EFCAB11-212ENST00000556639 TSPY3P0CV98 308 aa16.15■□□□□ 0.18
EFCAB11-212ENST00000556639 TSPY8P0CW00 308 aa16.15■□□□□ 0.18
EFCAB11-212ENST00000556639 GABPAQ06546 454 aa16.15■□□□□ 0.18
EFCAB11-212ENST00000556639 ORC3Q9UBD5 711 aaPredicted RBP16.15■□□□□ 0.18
EFCAB11-212ENST00000556639 CIAPIN1Q6FI81 312 aa16.14■□□□□ 0.18
EFCAB11-212ENST00000556639 SYNE3Q6ZMZ3 975 aa16.14■□□□□ 0.18
EFCAB11-212ENST00000556639 TMTC2Q8N394 836 aa16.14■□□□□ 0.18
EFCAB11-212ENST00000556639 SPDYE2BA6NHP3 402 aa16.14■□□□□ 0.17
EFCAB11-212ENST00000556639 SPDYE6P0CI01 402 aa16.14■□□□□ 0.17
EFCAB11-212ENST00000556639 PDCP20941 246 aa16.14■□□□□ 0.17
EFCAB11-212ENST00000556639 HMGN5P82970 282 aaKnown RBP16.14■□□□□ 0.17
EFCAB11-212ENST00000556639 TROAPQ12815 778 aa16.14■□□□□ 0.17
EFCAB11-212ENST00000556639 FANCBQ8NB91 859 aa16.14■□□□□ 0.17
EFCAB11-212ENST00000556639 SCAF8Q9UPN6 1271 aaKnown RBP16.14■□□□□ 0.17
EFCAB11-212ENST00000556639 MYO3BQ8WXR4 1341 aa16.14■□□□□ 0.17
EFCAB11-212ENST00000556639 DHX16O60231 1041 aaKnown RBP16.13■□□□□ 0.17
EFCAB11-212ENST00000556639 RTN1Q16799 776 aa16.13■□□□□ 0.17
EFCAB11-212ENST00000556639 TTC6Q86TZ1 520 aa16.13■□□□□ 0.17
EFCAB11-212ENST00000556639 IDI2Q9BXS1 227 aa16.13■□□□□ 0.17
EFCAB11-212ENST00000556639 ARFGEF1Q9Y6D6 1849 aa16.13■□□□□ 0.17
EFCAB11-212ENST00000556639 TCP10L2B9ZVM9 353 aa16.13■□□□□ 0.17
EFCAB11-212ENST00000556639 EGFRP00533 1210 aa16.13■□□□□ 0.17
EFCAB11-212ENST00000556639 SHROOM1Q2M3G4 852 aaPredicted RBP16.13■□□□□ 0.17
EFCAB11-212ENST00000556639 RASGRP2Q7LDG7 609 aa16.13■□□□□ 0.17
EFCAB11-212ENST00000556639 CLEC10AQ8IUN9 316 aa16.13■□□□□ 0.17
EFCAB11-212ENST00000556639 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.13■□□□□ 0.17
EFCAB11-212ENST00000556639 DNAJC18Q9H819 358 aa16.13■□□□□ 0.17
EFCAB11-212ENST00000556639 SERPINB13Q9UIV8 391 aa16.13■□□□□ 0.17
EFCAB11-212ENST00000556639 MTMR7Q9Y216 660 aa16.13■□□□□ 0.17
EFCAB11-212ENST00000556639 CNPY2Q9Y2B0 182 aa16.13■□□□□ 0.17
EFCAB11-212ENST00000556639 H3BQV1 296 aa16.12■□□□□ 0.17
EFCAB11-212ENST00000556639 PRPF40AO75400 957 aaKnown RBP16.12■□□□□ 0.17
EFCAB11-212ENST00000556639 AKR1B1P15121 316 aa16.12■□□□□ 0.17
EFCAB11-212ENST00000556639 GUCY1A2P33402 732 aa16.12■□□□□ 0.17
EFCAB11-212ENST00000556639 DNM1Q05193 864 aaKnown RBP16.12■□□□□ 0.17
EFCAB11-212ENST00000556639 DLGAP5Q15398 846 aa16.12■□□□□ 0.17
EFCAB11-212ENST00000556639 IFFO2Q5TF58 517 aa16.12■□□□□ 0.17
EFCAB11-212ENST00000556639 ARHGAP27Q6ZUM4 889 aa16.12■□□□□ 0.17
EFCAB11-212ENST00000556639 ZSCAN29Q8IWY8 852 aaPredicted RBP16.12■□□□□ 0.17
EFCAB11-212ENST00000556639 OGFOD1Q8N543 542 aa16.12■□□□□ 0.17
EFCAB11-212ENST00000556639 LMBRD1Q9NUN5 540 aa16.12■□□□□ 0.17
EFCAB11-212ENST00000556639 SIPA1L1O43166 1804 aa16.12■□□□□ 0.17
EFCAB11-212ENST00000556639 DDX11L8A8MPP1 907 aa16.12■□□□□ 0.17
EFCAB11-212ENST00000556639 PLEKHA8P1O95397 391 aa16.12■□□□□ 0.17
EFCAB11-212ENST00000556639 SHMT1P34896 483 aa16.12■□□□□ 0.17
EFCAB11-212ENST00000556639 CATIPQ7Z7H3 387 aa16.12■□□□□ 0.17
EFCAB11-212ENST00000556639 AGBL3Q8NEM8 1001 aa16.12■□□□□ 0.17
EFCAB11-212ENST00000556639 SLC26A6Q9BXS9 759 aa16.12■□□□□ 0.17
EFCAB11-212ENST00000556639 STX8Q9UNK0 236 aa16.12■□□□□ 0.17
EFCAB11-212ENST00000556639 GJA3Q9Y6H8 435 aa16.12■□□□□ 0.17
EFCAB11-212ENST00000556639 hCG_1642624A0A1W2PR95 340 aa16.11■□□□□ 0.17
EFCAB11-212ENST00000556639 NBPF9Q3BBW0 867 aa16.11■□□□□ 0.17
EFCAB11-212ENST00000556639 RBM26Q5T8P6 1007 aaKnown RBP16.11■□□□□ 0.17
EFCAB11-212ENST00000556639 NBPF11Q86T75 865 aa16.11■□□□□ 0.17
EFCAB11-212ENST00000556639 SYT17Q9BSW7 474 aa16.11■□□□□ 0.17
EFCAB11-212ENST00000556639 ZNF70Q9UC06 446 aaPredicted RBP16.11■□□□□ 0.17
EFCAB11-212ENST00000556639 HDAC9Q9UKV0 1011 aa16.11■□□□□ 0.17
EFCAB11-212ENST00000556639 LTBP3Q9NS15 1303 aa16.11■□□□□ 0.17
EFCAB11-212ENST00000556639 NID2Q14112 1375 aa16.11■□□□□ 0.17
EFCAB11-212ENST00000556639 TRAK2O60296 914 aa16.11■□□□□ 0.17
EFCAB11-212ENST00000556639 CDAN1Q8IWY9 1227 aa16.11■□□□□ 0.17
EFCAB11-212ENST00000556639 NEDD1Q8NHV4 660 aa16.11■□□□□ 0.17
EFCAB11-212ENST00000556639 CEP95Q96GE4 821 aa16.11■□□□□ 0.17
EFCAB11-212ENST00000556639 EIF6P56537 245 aaKnown RBP16.1■□□□□ 0.17
EFCAB11-212ENST00000556639 RESTQ13127 1097 aa16.1■□□□□ 0.17
EFCAB11-212ENST00000556639 TMEM47Q9BQJ4 181 aa16.1■□□□□ 0.17
EFCAB11-212ENST00000556639 ZNF287Q9HBT7 754 aa16.1■□□□□ 0.17
EFCAB11-212ENST00000556639 ZNF541Q9H0D2 1346 aa16.1■□□□□ 0.17
EFCAB11-212ENST00000556639 BAZ2BQ9UIF8 2168 aaKnown RBP16.1■□□□□ 0.17
EFCAB11-212ENST00000556639 FZD9O00144 591 aa16.1■□□□□ 0.17
EFCAB11-212ENST00000556639 HLA-DOAP06340 250 aa16.1■□□□□ 0.17
EFCAB11-212ENST00000556639 IFNAR1P17181 557 aa16.1■□□□□ 0.17
EFCAB11-212ENST00000556639 TPRNQ4KMQ1 711 aa16.1■□□□□ 0.17
EFCAB11-212ENST00000556639 DGKHQ86XP1 1220 aa16.1■□□□□ 0.17
EFCAB11-212ENST00000556639 CRACR2BQ8N4Y2 399 aaPredicted RBP16.1■□□□□ 0.17
EFCAB11-212ENST00000556639 PNMA1Q8ND90 353 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms