RNA–Protein interactions for RNA: ENST00000556618.1

RCCD1-206, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene RCCD1, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-206ENST00000556618 SHROOM1Q2M3G4 852 aaPredicted RBP28.58■■■□□ 2.17
RCCD1-206ENST00000556618 CYP4F22Q6NT55 531 aa28.58■■■□□ 2.17
RCCD1-206ENST00000556618 PAXIP1Q6ZW49 1069 aaPredicted RBP28.58■■■□□ 2.17
RCCD1-206ENST00000556618 CCDC102AQ96A19 550 aa28.58■■■□□ 2.17
RCCD1-206ENST00000556618 INCENPQ9NQS7 918 aa28.58■■■□□ 2.17
RCCD1-206ENST00000556618 PICK1Q9NRD5 415 aa28.58■■■□□ 2.17
RCCD1-206ENST00000556618 PHIPQ8WWQ0 1821 aa28.58■■■□□ 2.17
RCCD1-206ENST00000556618 RASA1P20936 1047 aa28.58■■■□□ 2.17
RCCD1-206ENST00000556618 ABCB5Q2M3G0 1257 aa28.58■■■□□ 2.17
RCCD1-206ENST00000556618 RASAL3Q86YV0 1011 aa28.58■■■□□ 2.17
RCCD1-206ENST00000556618 GINM1Q9NU53 330 aa28.58■■■□□ 2.17
RCCD1-206ENST00000556618 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.58■■■□□ 2.17
RCCD1-206ENST00000556618 SPDYE5A6NIY4 337 aa28.57■■■□□ 2.16
RCCD1-206ENST00000556618 PRDM1O75626 825 aa28.57■■■□□ 2.16
RCCD1-206ENST00000556618 ASNSP08243 561 aa28.57■■■□□ 2.16
RCCD1-206ENST00000556618 FGRP09769 529 aa28.57■■■□□ 2.16
RCCD1-206ENST00000556618 ERO1BQ86YB8 467 aa28.57■■■□□ 2.16
RCCD1-206ENST00000556618 TBC1D10CQ8IV04 446 aa28.57■■■□□ 2.16
RCCD1-206ENST00000556618 CNKSR2Q8WXI2 1034 aa28.57■■■□□ 2.16
RCCD1-206ENST00000556618 CCDC17Q96LX7 622 aa28.57■■■□□ 2.16
RCCD1-206ENST00000556618 FAM155AB1AL88 458 aaPredicted RBP28.56■■■□□ 2.16
RCCD1-206ENST00000556618 REC8O95072 547 aa28.56■■■□□ 2.16
RCCD1-206ENST00000556618 GH2P01242 217 aa28.56■■■□□ 2.16
RCCD1-206ENST00000556618 SLC10A3P09131 477 aa28.56■■■□□ 2.16
RCCD1-206ENST00000556618 PTPRAP18433 802 aa28.56■■■□□ 2.16
RCCD1-206ENST00000556618 AKNAD1Q5T1N1 836 aa28.56■■■□□ 2.16
RCCD1-206ENST00000556618 OPTNQ96CV9 577 aa28.56■■■□□ 2.16
RCCD1-206ENST00000556618 WNK4Q96J92 1243 aa28.56■■■□□ 2.16
RCCD1-206ENST00000556618 CAPNS2Q96L46 248 aa28.56■■■□□ 2.16
RCCD1-206ENST00000556618 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.56■■■□□ 2.16
RCCD1-206ENST00000556618 ZBTB21Q9ULJ3 1066 aa28.56■■■□□ 2.16
RCCD1-206ENST00000556618 CYP21A2P08686 494 aa28.55■■■□□ 2.16
RCCD1-206ENST00000556618 AKR1B1P15121 316 aa28.55■■■□□ 2.16
RCCD1-206ENST00000556618 ZNF444Q8N0Y2 327 aaPredicted RBP28.55■■■□□ 2.16
RCCD1-206ENST00000556618 CABP5Q9NP86 173 aa28.55■■■□□ 2.16
RCCD1-206ENST00000556618 ORC4O43929 436 aa28.54■■■□□ 2.16
RCCD1-206ENST00000556618 GJA5P36382 358 aa28.54■■■□□ 2.16
RCCD1-206ENST00000556618 PPATQ06203 517 aa28.54■■■□□ 2.16
RCCD1-206ENST00000556618 NECTIN1Q15223 517 aa28.54■■■□□ 2.16
RCCD1-206ENST00000556618 SPRYD7Q5W111 196 aa28.54■■■□□ 2.16
RCCD1-206ENST00000556618 MFSD6Q6ZSS7 791 aa28.54■■■□□ 2.16
RCCD1-206ENST00000556618 STAG1Q8WVM7 1258 aa28.54■■■□□ 2.16
RCCD1-206ENST00000556618 MPHOSPH10O00566 681 aaKnown RBP28.54■■■□□ 2.16
RCCD1-206ENST00000556618 PCP11498 1178 aaKnown RBP28.54■■■□□ 2.16
RCCD1-206ENST00000556618 ECE1P42892 770 aa28.54■■■□□ 2.16
RCCD1-206ENST00000556618 VEGFBP49765 207 aa28.54■■■□□ 2.16
RCCD1-206ENST00000556618 GRM1Q13255 1194 aa28.54■■■□□ 2.16
RCCD1-206ENST00000556618 OTUD5Q96G74 571 aa28.54■■■□□ 2.16
RCCD1-206ENST00000556618 RNF41Q9H4P4 317 aaPredicted RBP28.54■■■□□ 2.16
RCCD1-206ENST00000556618 GUCY1A2P33402 732 aa28.53■■■□□ 2.16
RCCD1-206ENST00000556618 CCDC84Q86UT8 332 aaPredicted RBP28.53■■■□□ 2.16
RCCD1-206ENST00000556618 ZHX2Q9Y6X8 837 aa28.53■■■□□ 2.16
RCCD1-206ENST00000556618 PCNTO95613 3336 aa28.53■■■□□ 2.16
RCCD1-206ENST00000556618 GREB1LQ9C091 1923 aaPredicted RBP28.52■■■□□ 2.16
RCCD1-206ENST00000556618 USP17L5A8MUK1 530 aa28.52■■■□□ 2.16
RCCD1-206ENST00000556618 ZBTB48P10074 688 aaPredicted RBP28.52■■■□□ 2.16
RCCD1-206ENST00000556618 PPIL2Q13356 520 aa28.52■■■□□ 2.16
RCCD1-206ENST00000556618 TMEM179Q6ZVK1 233 aa28.52■■■□□ 2.16
RCCD1-206ENST00000556618 WDR33Q9C0J8 1336 aaKnown RBP28.52■■■□□ 2.16
RCCD1-206ENST00000556618 MKRN3Q13064 507 aaKnown RBP28.51■■■□□ 2.15
RCCD1-206ENST00000556618 C8orf34Q49A92 452 aa28.51■■■□□ 2.15
RCCD1-206ENST00000556618 TOMM22Q9NS69 142 aa28.51■■■□□ 2.15
RCCD1-206ENST00000556618 IRF6O14896 467 aa28.5■■■□□ 2.15
RCCD1-206ENST00000556618 SEPT2Q15019 361 aa28.5■■■□□ 2.15
RCCD1-206ENST00000556618 RAB3GAP1Q15042 981 aa28.5■■■□□ 2.15
RCCD1-206ENST00000556618 CREB3L3Q68CJ9 461 aa28.5■■■□□ 2.15
RCCD1-206ENST00000556618 DNAJC5GQ8N7S2 189 aa28.5■■■□□ 2.15
RCCD1-206ENST00000556618 AFG3L2Q9Y4W6 797 aa28.5■■■□□ 2.15
RCCD1-206ENST00000556618 TAF6LQ9Y6J9 622 aa28.5■■■□□ 2.15
RCCD1-206ENST00000556618 SLC27A2O14975 620 aa28.5■■■□□ 2.15
RCCD1-206ENST00000556618 RANBP6O60518 1105 aaKnown RBP28.5■■■□□ 2.15
RCCD1-206ENST00000556618 TFAP4Q01664 338 aa28.5■■■□□ 2.15
RCCD1-206ENST00000556618 FAM47AQ5JRC9 791 aa28.5■■■□□ 2.15
RCCD1-206ENST00000556618 RRP12Q5JTH9 1297 aaKnown RBP28.5■■■□□ 2.15
RCCD1-206ENST00000556618 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.5■■■□□ 2.15
RCCD1-206ENST00000556618 PTPRFP10586 1907 aa28.49■■■□□ 2.15
RCCD1-206ENST00000556618 EPB41L2O43491 1005 aaKnown RBP28.49■■■□□ 2.15
RCCD1-206ENST00000556618 NEDD4P46934 1319 aa28.49■■■□□ 2.15
RCCD1-206ENST00000556618 NOGQ13253 232 aa28.49■■■□□ 2.15
RCCD1-206ENST00000556618 TBC1D2Q9BYX2 928 aa28.49■■■□□ 2.15
RCCD1-206ENST00000556618 AOC2O75106 756 aa28.48■■■□□ 2.15
RCCD1-206ENST00000556618 TSPY3P0CV98 308 aa28.48■■■□□ 2.15
RCCD1-206ENST00000556618 TSPY8P0CW00 308 aa28.48■■■□□ 2.15
RCCD1-206ENST00000556618 NEDD1Q8NHV4 660 aa28.48■■■□□ 2.15
RCCD1-206ENST00000556618 WDR18Q9BV38 432 aa28.48■■■□□ 2.15
RCCD1-206ENST00000556618 USP26Q9BXU7 913 aa28.48■■■□□ 2.15
RCCD1-206ENST00000556618 AS3MTQ9HBK9 375 aa28.48■■■□□ 2.15
RCCD1-206ENST00000556618 ZNF280CQ8ND82 737 aa28.47■■■□□ 2.15
RCCD1-206ENST00000556618 ZIC5Q96T25 663 aa28.47■■■□□ 2.15
RCCD1-206ENST00000556618 KCNH4Q9UQ05 1017 aa28.47■■■□□ 2.15
RCCD1-206ENST00000556618 TSPY2A6NKD2 308 aa28.46■■■□□ 2.15
RCCD1-206ENST00000556618 E7EWF7 191 aa28.46■■■□□ 2.15
RCCD1-206ENST00000556618 EIF5BO60841 1220 aaKnown RBP28.46■■■□□ 2.15
RCCD1-206ENST00000556618 SPP2Q13103 211 aa28.46■■■□□ 2.15
RCCD1-206ENST00000556618 RNF20Q5VTR2 975 aa28.46■■■□□ 2.15
RCCD1-206ENST00000556618 NKX2-3Q8TAU0 364 aa28.46■■■□□ 2.15
RCCD1-206ENST00000556618 CNNM2Q9H8M5 875 aa28.46■■■□□ 2.15
RCCD1-206ENST00000556618 PLIN4Q96Q06 1357 aa28.46■■■□□ 2.15
RCCD1-206ENST00000556618 CXCL11O14625 94 aa28.45■■■□□ 2.15
RCCD1-206ENST00000556618 SEC24BO95487 1268 aa28.45■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms