RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 PCDHGC4Q9Y5F7 938 aa7.14□□□□□ -1.27
TDP1-215ENST00000556498 PEG3Q9GZU2 1588 aa7.13□□□□□ -1.27
TDP1-215ENST00000556498 SBNO2Q9Y2G9 1366 aa7.13□□□□□ -1.27
TDP1-215ENST00000556498 MMEP08473 750 aa7.13□□□□□ -1.27
TDP1-215ENST00000556498 PECAM1P16284 738 aaPredicted RBP7.13□□□□□ -1.27
TDP1-215ENST00000556498 RBM6P78332 1123 aaKnown RBP7.13□□□□□ -1.27
TDP1-215ENST00000556498 INF2Q27J81 1249 aa7.13□□□□□ -1.27
TDP1-215ENST00000556498 KBTBD12Q3ZCT8 623 aa7.13□□□□□ -1.27
TDP1-215ENST00000556498 CCDC152Q4G0S7 254 aa7.13□□□□□ -1.27
TDP1-215ENST00000556498 TMC7Q7Z402 723 aa7.13□□□□□ -1.27
TDP1-215ENST00000556498 RGL4Q8IZJ4 473 aa7.13□□□□□ -1.27
TDP1-215ENST00000556498 GJD3Q8N144 294 aa7.13□□□□□ -1.27
TDP1-215ENST00000556498 JAKMIP2Q96AA8 810 aa7.13□□□□□ -1.27
TDP1-215ENST00000556498 ZBTB10Q96DT7 871 aa7.13□□□□□ -1.27
TDP1-215ENST00000556498 CDHR1Q96JP9 859 aa7.13□□□□□ -1.27
TDP1-215ENST00000556498 DHRS1Q96LJ7 313 aa7.13□□□□□ -1.27
TDP1-215ENST00000556498 MPHOSPH6Q99547 160 aaKnown RBP7.13□□□□□ -1.27
TDP1-215ENST00000556498 MAP3K14Q99558 947 aa7.13□□□□□ -1.27
TDP1-215ENST00000556498 UTP14AQ9BVJ6 771 aaKnown RBP7.13□□□□□ -1.27
TDP1-215ENST00000556498 NACA2Q9H009 215 aa7.13□□□□□ -1.27
TDP1-215ENST00000556498 DIS3Q9Y2L1 958 aaKnown RBP7.13□□□□□ -1.27
TDP1-215ENST00000556498 TMEM98Q9Y2Y6 226 aa7.13□□□□□ -1.27
TDP1-215ENST00000556498 RTCBQ9Y3I0 505 aaKnown RBP7.13□□□□□ -1.27
TDP1-215ENST00000556498 LRRFIP2Q9Y608 721 aaKnown RBP7.13□□□□□ -1.27
TDP1-215ENST00000556498 V9GYY5 206 aaPredicted RBP7.13□□□□□ -1.27
TDP1-215ENST00000556498 ATAD2BQ9ULI0 1458 aa7.12□□□□□ -1.27
TDP1-215ENST00000556498 GOLGA6L10A6NI86 522 aa7.12□□□□□ -1.27
TDP1-215ENST00000556498 CHL1O00533 1208 aa7.12□□□□□ -1.27
TDP1-215ENST00000556498 ATXN7O15265 892 aaPredicted RBP7.12□□□□□ -1.27
TDP1-215ENST00000556498 ZSCAN9O15535 394 aaPredicted RBP7.12□□□□□ -1.27
TDP1-215ENST00000556498 NEBLO76041 1014 aa7.12□□□□□ -1.27
TDP1-215ENST00000556498 CPP00450 1065 aa7.12□□□□□ -1.27
TDP1-215ENST00000556498 IGHA2P01877 340 aa7.12□□□□□ -1.27
TDP1-215ENST00000556498 RPLP1P05386 114 aaKnown RBP7.12□□□□□ -1.27
TDP1-215ENST00000556498 HNRNPCP07910 306 aaKnown RBP eCLIP7.12□□□□□ -1.27
TDP1-215ENST00000556498 FAM157BP0CG42 384 aa7.12□□□□□ -1.27
TDP1-215ENST00000556498 COL6A1P12109 1028 aa7.12□□□□□ -1.27
TDP1-215ENST00000556498 PCSK2P16519 638 aa7.12□□□□□ -1.27
TDP1-215ENST00000556498 GRNP28799 593 aaKnown RBP7.12□□□□□ -1.27
TDP1-215ENST00000556498 TPP2P29144 1249 aaPredicted RBP7.12□□□□□ -1.27
TDP1-215ENST00000556498 PIK3CAP42336 1068 aa7.12□□□□□ -1.27
TDP1-215ENST00000556498 PDE3BQ13370 1112 aa7.12□□□□□ -1.27
TDP1-215ENST00000556498 WTAPQ15007 396 aa7.12□□□□□ -1.27
TDP1-215ENST00000556498 MAPRE1Q15691 268 aaKnown RBP7.12□□□□□ -1.27
TDP1-215ENST00000556498 ZRSR1Q15695 479 aaKnown RBP7.12□□□□□ -1.27
TDP1-215ENST00000556498 CNGA3Q16281 694 aa7.12□□□□□ -1.27
TDP1-215ENST00000556498 PKN1Q16512 942 aa7.12□□□□□ -1.27
TDP1-215ENST00000556498 PREPLQ4J6C6 727 aaPredicted RBP7.12□□□□□ -1.27
TDP1-215ENST00000556498 CCDC158Q5M9N0 1113 aa7.12□□□□□ -1.27
TDP1-215ENST00000556498 CDC37L1Q7L3B6 337 aa7.12□□□□□ -1.27
TDP1-215ENST00000556498 DAAM2Q86T65 1068 aa7.12□□□□□ -1.27
TDP1-215ENST00000556498 KIAA1328Q86T90 577 aa7.12□□□□□ -1.27
TDP1-215ENST00000556498 PEX5LQ8IYB4 626 aa7.12□□□□□ -1.27
TDP1-215ENST00000556498 SAMD14Q8IZD0 417 aaPredicted RBP7.12□□□□□ -1.27
TDP1-215ENST00000556498 NEK9Q8TD19 979 aa7.12□□□□□ -1.27
TDP1-215ENST00000556498 RTF1Q92541 710 aaKnown RBP7.12□□□□□ -1.27
TDP1-215ENST00000556498 NUDT16Q96DE0 195 aaKnown RBP7.12□□□□□ -1.27
TDP1-215ENST00000556498 ZNF837Q96EG3 531 aaPredicted RBP7.12□□□□□ -1.27
TDP1-215ENST00000556498 VMP1Q96GC9 406 aa7.12□□□□□ -1.27
TDP1-215ENST00000556498 FAXDC2Q96IV6 333 aa7.12□□□□□ -1.27
TDP1-215ENST00000556498 RNPC3Q96LT9 517 aaKnown RBP7.12□□□□□ -1.27
TDP1-215ENST00000556498 GSDMAQ96QA5 445 aa7.12□□□□□ -1.27
TDP1-215ENST00000556498 FAM129BQ96TA1 746 aa7.12□□□□□ -1.27
TDP1-215ENST00000556498 SH3GL1Q99961 368 aa7.12□□□□□ -1.27
TDP1-215ENST00000556498 PANK2Q9BZ23 570 aa7.12□□□□□ -1.27
TDP1-215ENST00000556498 FAM107BQ9H098 131 aa7.12□□□□□ -1.27
TDP1-215ENST00000556498 MUC3BQ9H195 1237 aa7.12□□□□□ -1.27
TDP1-215ENST00000556498 GGNBP2Q9H3C7 697 aa7.12□□□□□ -1.27
TDP1-215ENST00000556498 RABEP2Q9H5N1 569 aa7.12□□□□□ -1.27
TDP1-215ENST00000556498 NRDE2Q9H7Z3 1164 aa7.12□□□□□ -1.27
TDP1-215ENST00000556498 USP20Q9Y2K6 914 aa7.12□□□□□ -1.27
TDP1-215ENST00000556498 ZKSCAN5Q9Y2L8 839 aa7.12□□□□□ -1.27
TDP1-215ENST00000556498 EIF4G1Q04637 1599 aaKnown RBP7.12□□□□□ -1.27
TDP1-215ENST00000556498 PIK3R4Q99570 1358 aa7.11□□□□□ -1.27
TDP1-215ENST00000556498 SLC27A2O14975 620 aa7.11□□□□□ -1.27
TDP1-215ENST00000556498 EFSO43281 561 aa7.11□□□□□ -1.27
TDP1-215ENST00000556498 MYO1BO43795 1136 aa7.11□□□□□ -1.27
TDP1-215ENST00000556498 BNIP3LO60238 219 aa7.11□□□□□ -1.27
TDP1-215ENST00000556498 EPB42P16452 691 aa7.11□□□□□ -1.27
TDP1-215ENST00000556498 TRIM21P19474 475 aaKnown RBP7.11□□□□□ -1.27
TDP1-215ENST00000556498 CCNCP24863 283 aa7.11□□□□□ -1.27
TDP1-215ENST00000556498 PSMD7P51665 324 aa7.11□□□□□ -1.27
TDP1-215ENST00000556498 KCNQ4P56696 695 aa7.11□□□□□ -1.27
TDP1-215ENST00000556498 TNP2Q05952 138 aa7.11□□□□□ -1.27
TDP1-215ENST00000556498 COX10Q12887 443 aa7.11□□□□□ -1.27
TDP1-215ENST00000556498 EIF4A2Q14240 407 aaKnown RBP7.11□□□□□ -1.27
TDP1-215ENST00000556498 FXNQ16595 210 aa7.11□□□□□ -1.27
TDP1-215ENST00000556498 SLC4A8Q2Y0W8 1093 aa7.11□□□□□ -1.27
TDP1-215ENST00000556498 NBPF8Q3BBV2 869 aa7.11□□□□□ -1.27
TDP1-215ENST00000556498 FAAH2Q6GMR7 532 aa7.11□□□□□ -1.27
TDP1-215ENST00000556498 KCNV1Q6PIU1 500 aa7.11□□□□□ -1.27
TDP1-215ENST00000556498 DPH6Q7L8W6 267 aa7.11□□□□□ -1.27
TDP1-215ENST00000556498 CMTR1Q8N1G2 835 aaKnown RBP7.11□□□□□ -1.27
TDP1-215ENST00000556498 ARL6IP6Q8N6S5 226 aa7.11□□□□□ -1.27
TDP1-215ENST00000556498 TRIML1Q8N9V2 468 aa7.11□□□□□ -1.27
TDP1-215ENST00000556498 SVIPQ8NHG7 77 aa7.11□□□□□ -1.27
TDP1-215ENST00000556498 ERMNQ8TAM6 284 aa7.11□□□□□ -1.27
TDP1-215ENST00000556498 NACC2Q96BF6 587 aa7.11□□□□□ -1.27
TDP1-215ENST00000556498 CENPTQ96BT3 561 aa7.11□□□□□ -1.27
TDP1-215ENST00000556498 NAF1Q96HR8 494 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms