RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 GABPAQ06546 454 aa9.79□□□□□ -0.84
VTI1B-206ENST00000556461 PKN2Q16513 984 aaKnown RBP9.79□□□□□ -0.84
VTI1B-206ENST00000556461 FASTKD5Q7L8L6 764 aaKnown RBP9.79□□□□□ -0.84
VTI1B-206ENST00000556461 SLC44A5Q8NCS7 719 aa9.79□□□□□ -0.84
VTI1B-206ENST00000556461 OSBP2Q969R2 916 aa9.79□□□□□ -0.84
VTI1B-206ENST00000556461 DYNLL2Q96FJ2 89 aa9.79□□□□□ -0.84
VTI1B-206ENST00000556461 GPATCH3Q96I76 525 aa9.79□□□□□ -0.84
VTI1B-206ENST00000556461 WDR18Q9BV38 432 aa9.79□□□□□ -0.84
VTI1B-206ENST00000556461 TRIM34Q9BYJ4 488 aa9.79□□□□□ -0.84
VTI1B-206ENST00000556461 EFCC1Q9HA90 598 aa9.79□□□□□ -0.84
VTI1B-206ENST00000556461 MYH1P12882 1939 aa9.79□□□□□ -0.84
VTI1B-206ENST00000556461 TTC41PQ6P2S7 1318 aa9.79□□□□□ -0.84
VTI1B-206ENST00000556461 PTPRFP10586 1907 aa9.78□□□□□ -0.84
VTI1B-206ENST00000556461 ATAD5Q96QE3 1844 aa9.78□□□□□ -0.84
VTI1B-206ENST00000556461 M0R2C6 588 aa9.78□□□□□ -0.84
VTI1B-206ENST00000556461 RNF113AO15541 343 aaKnown RBP9.78□□□□□ -0.84
VTI1B-206ENST00000556461 ASNSP08243 561 aa9.78□□□□□ -0.84
VTI1B-206ENST00000556461 BCRP11274 1271 aa9.78□□□□□ -0.84
VTI1B-206ENST00000556461 MX1P20591 662 aa9.78□□□□□ -0.84
VTI1B-206ENST00000556461 GUCY1A2P33402 732 aa9.78□□□□□ -0.84
VTI1B-206ENST00000556461 SOX10P56693 466 aa9.78□□□□□ -0.84
VTI1B-206ENST00000556461 LACTBP83111 547 aaPredicted RBP9.78□□□□□ -0.84
VTI1B-206ENST00000556461 MTMR2Q13614 643 aa9.78□□□□□ -0.84
VTI1B-206ENST00000556461 B4GALNT3Q6L9W6 998 aa9.78□□□□□ -0.84
VTI1B-206ENST00000556461 TTC6Q86TZ1 520 aa9.78□□□□□ -0.84
VTI1B-206ENST00000556461 GCC1Q96CN9 775 aa9.78□□□□□ -0.84
VTI1B-206ENST00000556461 STRBPQ96SI9 672 aaKnown RBP9.78□□□□□ -0.84
VTI1B-206ENST00000556461 SEC62Q99442 399 aaKnown RBP9.78□□□□□ -0.84
VTI1B-206ENST00000556461 PARK7Q99497 189 aaKnown RBP9.78□□□□□ -0.84
VTI1B-206ENST00000556461 LNPKQ9C0E8 428 aa9.78□□□□□ -0.84
VTI1B-206ENST00000556461 AGTPBP1Q9UPW5 1226 aa9.78□□□□□ -0.84
VTI1B-206ENST00000556461 PTPN22Q9Y2R2 807 aa9.78□□□□□ -0.84
VTI1B-206ENST00000556461 SLC4A4Q9Y6R1 1079 aa9.78□□□□□ -0.84
VTI1B-206ENST00000556461 NAV1Q8NEY1 1877 aa9.78□□□□□ -0.84
VTI1B-206ENST00000556461 USP17L12C9JPN9 530 aa9.77□□□□□ -0.85
VTI1B-206ENST00000556461 USP17L21D6R901 530 aa9.77□□□□□ -0.85
VTI1B-206ENST00000556461 PEX10O60683 326 aa9.77□□□□□ -0.85
VTI1B-206ENST00000556461 GLRX3O76003 335 aaKnown RBP9.77□□□□□ -0.85
VTI1B-206ENST00000556461 BACE1P56817 501 aa9.77□□□□□ -0.85
VTI1B-206ENST00000556461 CERKLQ49MI3 558 aaPredicted RBP9.77□□□□□ -0.85
VTI1B-206ENST00000556461 SH3D19Q5HYK7 790 aa9.77□□□□□ -0.85
VTI1B-206ENST00000556461 C12orf60Q5U649 245 aa9.77□□□□□ -0.85
VTI1B-206ENST00000556461 ZSCAN25Q6NSZ9 544 aa9.77□□□□□ -0.85
VTI1B-206ENST00000556461 SMC5Q8IY18 1101 aa9.77□□□□□ -0.85
VTI1B-206ENST00000556461 PROCA1Q8NCQ7 364 aaPredicted RBP9.77□□□□□ -0.85
VTI1B-206ENST00000556461 ACER1Q8TDN7 264 aa9.77□□□□□ -0.85
VTI1B-206ENST00000556461 APPBP2Q92624 585 aa9.77□□□□□ -0.85
VTI1B-206ENST00000556461 TRIM47Q96LD4 638 aa9.77□□□□□ -0.85
VTI1B-206ENST00000556461 ATP8A2Q9NTI2 1148 aa9.77□□□□□ -0.85
VTI1B-206ENST00000556461 PTCH2Q9Y6C5 1203 aa9.77□□□□□ -0.85
VTI1B-206ENST00000556461 GSG1L2A8MUP6 293 aa9.76□□□□□ -0.85
VTI1B-206ENST00000556461 ERC2O15083 957 aa9.76□□□□□ -0.85
VTI1B-206ENST00000556461 GPAA1O43292 621 aa9.76□□□□□ -0.85
VTI1B-206ENST00000556461 AKR1B1P15121 316 aa9.76□□□□□ -0.85
VTI1B-206ENST00000556461 PSMC4P43686 418 aa9.76□□□□□ -0.85
VTI1B-206ENST00000556461 PDE1AP54750 535 aa9.76□□□□□ -0.85
VTI1B-206ENST00000556461 AAMPQ13685 434 aa9.76□□□□□ -0.85
VTI1B-206ENST00000556461 SEPT2Q15019 361 aa9.76□□□□□ -0.85
VTI1B-206ENST00000556461 RAB3GAP1Q15042 981 aa9.76□□□□□ -0.85
VTI1B-206ENST00000556461 ZYXQ15942 572 aaKnown RBP9.76□□□□□ -0.85
VTI1B-206ENST00000556461 ABCB5Q2M3G0 1257 aa9.76□□□□□ -0.85
VTI1B-206ENST00000556461 CTR9Q6PD62 1173 aa9.76□□□□□ -0.85
VTI1B-206ENST00000556461 POTEEQ6S8J3 1075 aa9.76□□□□□ -0.85
VTI1B-206ENST00000556461 CLEC10AQ8IUN9 316 aa9.76□□□□□ -0.85
VTI1B-206ENST00000556461 TBC1D2Q9BYX2 928 aa9.76□□□□□ -0.85
VTI1B-206ENST00000556461 ASCC2Q9H1I8 757 aaPredicted RBP9.76□□□□□ -0.85
VTI1B-206ENST00000556461 RWDD1Q9H446 243 aaPredicted RBP9.76□□□□□ -0.85
VTI1B-206ENST00000556461 AS3MTQ9HBK9 375 aa9.76□□□□□ -0.85
VTI1B-206ENST00000556461 EPB41L4AQ9HCS5 686 aaPredicted RBP9.76□□□□□ -0.85
VTI1B-206ENST00000556461 EMILIN3Q9NT22 766 aa9.76□□□□□ -0.85
VTI1B-206ENST00000556461 GINM1Q9NU53 330 aa9.76□□□□□ -0.85
VTI1B-206ENST00000556461 STAP2Q9UGK3 403 aa9.76□□□□□ -0.85
VTI1B-206ENST00000556461 SLC45A1Q9Y2W3 748 aa9.76□□□□□ -0.85
VTI1B-206ENST00000556461 MYH7P12883 1935 aa9.76□□□□□ -0.85
VTI1B-206ENST00000556461 MKI67P46013 3256 aaKnown RBP9.76□□□□□ -0.85
VTI1B-206ENST00000556461 LOC285556D6RIA3 1793 aa9.75□□□□□ -0.85
VTI1B-206ENST00000556461 TNRC18O15417 2968 aaPredicted RBP9.75□□□□□ -0.85
VTI1B-206ENST00000556461 A0A1W2PRG0 241 aa9.75□□□□□ -0.85
VTI1B-206ENST00000556461 USP17L10C9JJH3 530 aa9.75□□□□□ -0.85
VTI1B-206ENST00000556461 OSBPP22059 807 aa9.75□□□□□ -0.85
VTI1B-206ENST00000556461 CDK8P49336 464 aa9.75□□□□□ -0.85
VTI1B-206ENST00000556461 RGS19P49795 217 aa9.75□□□□□ -0.85
VTI1B-206ENST00000556461 CCDC129Q6ZRS4 1044 aa9.75□□□□□ -0.85
VTI1B-206ENST00000556461 SIAH1Q8IUQ4 282 aa9.75□□□□□ -0.85
VTI1B-206ENST00000556461 ANKRD13CQ8N6S4 541 aa9.75□□□□□ -0.85
VTI1B-206ENST00000556461 P2RX7Q99572 595 aaKnown RBP9.75□□□□□ -0.85
VTI1B-206ENST00000556461 FSD1Q9BTV5 496 aa9.75□□□□□ -0.85
VTI1B-206ENST00000556461 BAZ2AQ9UIF9 1905 aaKnown RBP9.75□□□□□ -0.85
VTI1B-206ENST00000556461 MPHOSPH10O00566 681 aaKnown RBP9.74□□□□□ -0.85
VTI1B-206ENST00000556461 FOXP2O15409 715 aa9.74□□□□□ -0.85
VTI1B-206ENST00000556461 FMNL1O95466 1100 aaPredicted RBP9.74□□□□□ -0.85
VTI1B-206ENST00000556461 ZFYP08048 801 aaPredicted RBP9.74□□□□□ -0.85
VTI1B-206ENST00000556461 NUCB1Q02818 461 aa9.74□□□□□ -0.85
VTI1B-206ENST00000556461 KIF22Q14807 665 aa9.74□□□□□ -0.85
VTI1B-206ENST00000556461 KIAA1755Q5JYT7 1200 aa9.74□□□□□ -0.85
VTI1B-206ENST00000556461 ZMYM1Q5SVZ6 1142 aa9.74□□□□□ -0.85
VTI1B-206ENST00000556461 USP17L2Q6R6M4 530 aa9.74□□□□□ -0.85
VTI1B-206ENST00000556461 C16orf86Q6ZW13 317 aa9.74□□□□□ -0.85
VTI1B-206ENST00000556461 CHD1LQ86WJ1 897 aa9.74□□□□□ -0.85
VTI1B-206ENST00000556461 STK11IPQ8N1F8 1099 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms