RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 CCDC189A1A4V9 331 aa5.84□□□□□ -1.48
TMEM260-210ENST00000556422 KLHL33A6NCF5 533 aa5.84□□□□□ -1.48
TMEM260-210ENST00000556422 PRC1O43663 620 aa5.84□□□□□ -1.48
TMEM260-210ENST00000556422 SLC5A1P13866 664 aa5.84□□□□□ -1.48
TMEM260-210ENST00000556422 SF3B3Q15393 1217 aaKnown RBP5.84□□□□□ -1.48
TMEM260-210ENST00000556422 CYB5R4Q7L1T6 521 aa5.84□□□□□ -1.48
TMEM260-210ENST00000556422 RASSF4Q9H2L5 321 aa5.84□□□□□ -1.48
TMEM260-210ENST00000556422 TFIP11Q9UBB9 837 aaKnown RBP5.84□□□□□ -1.48
TMEM260-210ENST00000556422 LAMB1P07942 1786 aa5.84□□□□□ -1.48
TMEM260-210ENST00000556422 DLEC1Q9Y238 1755 aa5.84□□□□□ -1.48
TMEM260-210ENST00000556422 NEDD4P46934 1319 aa5.84□□□□□ -1.48
TMEM260-210ENST00000556422 WDR19Q8NEZ3 1342 aa5.84□□□□□ -1.48
TMEM260-210ENST00000556422 ZNF213O14771 459 aa5.83□□□□□ -1.48
TMEM260-210ENST00000556422 MCM5P33992 734 aa5.83□□□□□ -1.48
TMEM260-210ENST00000556422 PSMD2Q13200 908 aa5.83□□□□□ -1.48
TMEM260-210ENST00000556422 ZSCAN25Q6NSZ9 544 aa5.83□□□□□ -1.48
TMEM260-210ENST00000556422 GIMAP6Q6P9H5 292 aa5.83□□□□□ -1.48
TMEM260-210ENST00000556422 ADGRA1Q86SQ6 560 aa5.83□□□□□ -1.48
TMEM260-210ENST00000556422 MAGEB6Q8N7X4 407 aa5.83□□□□□ -1.48
TMEM260-210ENST00000556422 NCOA7Q8NI08 942 aa5.83□□□□□ -1.48
TMEM260-210ENST00000556422 FTOQ9C0B1 505 aaKnown RBP eCLIP5.83□□□□□ -1.48
TMEM260-210ENST00000556422 TSPY26PQ9H489 355 aa5.83□□□□□ -1.48
TMEM260-210ENST00000556422 SENP2Q9HC62 589 aa5.83□□□□□ -1.48
TMEM260-210ENST00000556422 ZNF652Q9Y2D9 606 aa5.83□□□□□ -1.48
TMEM260-210ENST00000556422 COMMD10Q9Y6G5 202 aa5.83□□□□□ -1.48
TMEM260-210ENST00000556422 MAST2Q6P0Q8 1798 aa5.83□□□□□ -1.48
TMEM260-210ENST00000556422 BRWD3Q6RI45 1802 aa5.83□□□□□ -1.48
TMEM260-210ENST00000556422 DYTNA2CJ06 578 aa5.83□□□□□ -1.48
TMEM260-210ENST00000556422 COPB2P35606 906 aa5.83□□□□□ -1.48
TMEM260-210ENST00000556422 MAP2K2P36507 400 aa5.83□□□□□ -1.48
TMEM260-210ENST00000556422 IGHMBP2P38935 993 aaKnown RBP5.83□□□□□ -1.48
TMEM260-210ENST00000556422 NAA16Q6N069 864 aaPredicted RBP5.83□□□□□ -1.48
TMEM260-210ENST00000556422 C1orf131Q8NDD1 294 aaKnown RBP5.83□□□□□ -1.48
TMEM260-210ENST00000556422 CELF1Q92879 486 aaKnown RBP5.83□□□□□ -1.48
TMEM260-210ENST00000556422 CCDC47Q96A33 483 aaKnown RBP5.83□□□□□ -1.48
TMEM260-210ENST00000556422 INCENPQ9NQS7 918 aa5.83□□□□□ -1.48
TMEM260-210ENST00000556422 FBXO9Q9UK97 447 aaPredicted RBP5.83□□□□□ -1.48
TMEM260-210ENST00000556422 GSG1L2A8MUP6 293 aa5.83□□□□□ -1.48
TMEM260-210ENST00000556422 GUCY2CP25092 1073 aa5.83□□□□□ -1.48
TMEM260-210ENST00000556422 SF3B2Q13435 895 aaKnown RBP5.83□□□□□ -1.48
TMEM260-210ENST00000556422 ZNF384Q8TF68 577 aa5.83□□□□□ -1.48
TMEM260-210ENST00000556422 SCAND2PQ9GZW5 306 aaPredicted RBP5.83□□□□□ -1.48
TMEM260-210ENST00000556422 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.83□□□□□ -1.48
TMEM260-210ENST00000556422 SRP68Q9UHB9 627 aaKnown RBP5.83□□□□□ -1.48
TMEM260-210ENST00000556422 CDK5RAP2Q96SN8 1893 aa5.82□□□□□ -1.48
TMEM260-210ENST00000556422 OFD1O75665 1012 aa5.82□□□□□ -1.48
TMEM260-210ENST00000556422 ECM2O94769 699 aaPredicted RBP5.82□□□□□ -1.48
TMEM260-210ENST00000556422 MBD4O95243 580 aa5.82□□□□□ -1.48
TMEM260-210ENST00000556422 XBP1P17861 261 aa5.82□□□□□ -1.48
TMEM260-210ENST00000556422 PSMC1P62191 440 aaKnown RBP5.82□□□□□ -1.48
TMEM260-210ENST00000556422 FAM160A1Q05DH4 1040 aa5.82□□□□□ -1.48
TMEM260-210ENST00000556422 SLC10A5Q5PT55 438 aa5.82□□□□□ -1.48
TMEM260-210ENST00000556422 JAKMIP3Q5VZ66 844 aa5.82□□□□□ -1.48
TMEM260-210ENST00000556422 SLC51AQ86UW1 340 aa5.82□□□□□ -1.48
TMEM260-210ENST00000556422 RAB11FIP4Q86YS3 637 aa5.82□□□□□ -1.48
TMEM260-210ENST00000556422 LCORLQ8N3X6 602 aa5.82□□□□□ -1.48
TMEM260-210ENST00000556422 PHC3Q8NDX5 983 aa5.82□□□□□ -1.48
TMEM260-210ENST00000556422 NARFQ9UHQ1 456 aa5.82□□□□□ -1.48
TMEM260-210ENST00000556422 KLF18A0A0U1RQI7 1052 aa5.82□□□□□ -1.48
TMEM260-210ENST00000556422 SPDYE4A6NLX3 237 aa5.82□□□□□ -1.48
TMEM260-210ENST00000556422 PRKAB2O43741 272 aa5.82□□□□□ -1.48
TMEM260-210ENST00000556422 RXRBP28702 533 aa5.82□□□□□ -1.48
TMEM260-210ENST00000556422 CA8P35219 290 aa5.82□□□□□ -1.48
TMEM260-210ENST00000556422 GYG1P46976 350 aa5.82□□□□□ -1.48
TMEM260-210ENST00000556422 ALX1Q15699 326 aa5.82□□□□□ -1.48
TMEM260-210ENST00000556422 RC3H1Q5TC82 1133 aaKnown RBP5.82□□□□□ -1.48
TMEM260-210ENST00000556422 AMOTL1Q8IY63 956 aa5.82□□□□□ -1.48
TMEM260-210ENST00000556422 IFNL3Q8IZI9 196 aa5.82□□□□□ -1.48
TMEM260-210ENST00000556422 AIDAQ96BJ3 306 aa5.82□□□□□ -1.48
TMEM260-210ENST00000556422 ZSCAN16Q9H4T2 348 aaPredicted RBP5.82□□□□□ -1.48
TMEM260-210ENST00000556422 ARMT1Q9H993 441 aa5.82□□□□□ -1.48
TMEM260-210ENST00000556422 GJB4Q9NTQ9 266 aa5.82□□□□□ -1.48
TMEM260-210ENST00000556422 USP21Q9UK80 565 aa5.82□□□□□ -1.48
TMEM260-210ENST00000556422 MINPP1Q9UNW1 487 aa5.82□□□□□ -1.48
TMEM260-210ENST00000556422 PNPLA7Q6ZV29 1317 aa5.82□□□□□ -1.48
TMEM260-210ENST00000556422 GOLGA8BA8MQT2 603 aa5.82□□□□□ -1.48
TMEM260-210ENST00000556422 B4E1Z4 1266 aa5.82□□□□□ -1.48
TMEM260-210ENST00000556422 SH2B2O14492 632 aaPredicted RBP5.82□□□□□ -1.48
TMEM260-210ENST00000556422 RPS6KA4O75676 772 aa5.82□□□□□ -1.48
TMEM260-210ENST00000556422 KLRK1P26718 216 aa5.82□□□□□ -1.48
TMEM260-210ENST00000556422 POTEAQ6S8J7 498 aa5.82□□□□□ -1.48
TMEM260-210ENST00000556422 BICDL1Q6ZP65 573 aa5.82□□□□□ -1.48
TMEM260-210ENST00000556422 RBM43Q6ZSC3 357 aaKnown RBP5.82□□□□□ -1.48
TMEM260-210ENST00000556422 IFNLR1Q8IU57 520 aaPredicted RBP5.82□□□□□ -1.48
TMEM260-210ENST00000556422 IGDCC4Q8TDY8 1250 aa5.82□□□□□ -1.48
TMEM260-210ENST00000556422 MKL1Q969V6 931 aa5.82□□□□□ -1.48
TMEM260-210ENST00000556422 CDC5LQ99459 802 aaKnown RBP5.82□□□□□ -1.48
TMEM260-210ENST00000556422 SYNPO2Q9UMS6 1093 aa5.82□□□□□ -1.48
TMEM260-210ENST00000556422 ANGEL1Q9UNK9 670 aaKnown RBP5.82□□□□□ -1.48
TMEM260-210ENST00000556422 DUOX1Q9NRD9 1551 aa5.82□□□□□ -1.48
TMEM260-210ENST00000556422 H3BQV1 296 aa5.81□□□□□ -1.48
TMEM260-210ENST00000556422 SMIM22K7EJ46 135 aa5.81□□□□□ -1.48
TMEM260-210ENST00000556422 NR1I2O75469 434 aa5.81□□□□□ -1.48
TMEM260-210ENST00000556422 OATP04181 439 aa5.81□□□□□ -1.48
TMEM260-210ENST00000556422 GUCY1B3Q02153 619 aa5.81□□□□□ -1.48
TMEM260-210ENST00000556422 MAP3K12Q12852 859 aa5.81□□□□□ -1.48
TMEM260-210ENST00000556422 IFFO2Q5TF58 517 aa5.81□□□□□ -1.48
TMEM260-210ENST00000556422 RALYLQ86SE5 291 aaKnown RBP5.81□□□□□ -1.48
TMEM260-210ENST00000556422 RPUSD2Q8IZ73 545 aaKnown RBP5.81□□□□□ -1.48
TMEM260-210ENST00000556422 USP28Q96RU2 1077 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms