RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 C1GALT1Q9NS00 363 aa5.89□□□□□ -1.47
ATXN3-240ENST00000556339 GPN3Q9UHW5 284 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-240ENST00000556339 PPP1R9AQ9ULJ8 1098 aa5.89□□□□□ -1.47
ATXN3-240ENST00000556339 TRAK1Q9UPV9 953 aa5.89□□□□□ -1.47
ATXN3-240ENST00000556339 PLA2R1Q13018 1463 aa5.89□□□□□ -1.47
ATXN3-240ENST00000556339 PLXNC1O60486 1568 aa5.89□□□□□ -1.47
ATXN3-240ENST00000556339 C8AP07357 584 aa5.88□□□□□ -1.47
ATXN3-240ENST00000556339 ID3Q02535 119 aa5.88□□□□□ -1.47
ATXN3-240ENST00000556339 TRIM26Q12899 539 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-240ENST00000556339 ZNF792Q3KQV3 632 aa5.88□□□□□ -1.47
ATXN3-240ENST00000556339 DTHD1Q6ZMT9 781 aa5.88□□□□□ -1.47
ATXN3-240ENST00000556339 POU5F2Q8N7G0 328 aa5.88□□□□□ -1.47
ATXN3-240ENST00000556339 GSX1Q9H4S2 264 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-240ENST00000556339 SSU72Q9NP77 194 aaKnown RBP5.88□□□□□ -1.47
ATXN3-240ENST00000556339 PZPP20742 1482 aa5.88□□□□□ -1.47
ATXN3-240ENST00000556339 IQSEC2Q5JU85 1478 aa5.88□□□□□ -1.47
ATXN3-240ENST00000556339 KDM5DQ9BY66 1539 aa5.88□□□□□ -1.47
ATXN3-240ENST00000556339 DNMT1P26358 1616 aaKnown RBP5.88□□□□□ -1.47
ATXN3-240ENST00000556339 LTBP4Q8N2S1 1624 aa5.88□□□□□ -1.47
ATXN3-240ENST00000556339 MYO3AQ8NEV4 1616 aa5.88□□□□□ -1.47
ATXN3-240ENST00000556339 TMPRSS2O15393 492 aa5.87□□□□□ -1.47
ATXN3-240ENST00000556339 ITGAEP38570 1179 aa5.87□□□□□ -1.47
ATXN3-240ENST00000556339 PTPN12Q05209 780 aaKnown RBP5.87□□□□□ -1.47
ATXN3-240ENST00000556339 PPP2R3AQ06190 1150 aa5.87□□□□□ -1.47
ATXN3-240ENST00000556339 SEZ6L2Q6UXD5 910 aa5.87□□□□□ -1.47
ATXN3-240ENST00000556339 SMYD4Q8IYR2 804 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-240ENST00000556339 PLD6Q8N2A8 252 aaKnown RBP5.87□□□□□ -1.47
ATXN3-240ENST00000556339 FAM181AQ8N9Y4 354 aa5.87□□□□□ -1.47
ATXN3-240ENST00000556339 NETO1Q8TDF5 533 aa5.87□□□□□ -1.47
ATXN3-240ENST00000556339 KCNB2Q92953 911 aa5.87□□□□□ -1.47
ATXN3-240ENST00000556339 CCDC74AQ96AQ1 378 aa5.87□□□□□ -1.47
ATXN3-240ENST00000556339 NIF3L1Q9GZT8 377 aa5.87□□□□□ -1.47
ATXN3-240ENST00000556339 CCDC86Q9H6F5 360 aaKnown RBP5.87□□□□□ -1.47
ATXN3-240ENST00000556339 ABCB6Q9NP58 842 aa5.87□□□□□ -1.47
ATXN3-240ENST00000556339 PPP4R2Q9NY27 417 aa5.87□□□□□ -1.47
ATXN3-240ENST00000556339 USTQ9Y2C2 406 aa5.87□□□□□ -1.47
ATXN3-240ENST00000556339 ANKRD30AQ9BXX3 1397 aa5.87□□□□□ -1.47
ATXN3-240ENST00000556339 KIF15Q9NS87 1388 aa5.87□□□□□ -1.47
ATXN3-240ENST00000556339 NPHP4O75161 1426 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-240ENST00000556339 NLRP1Q9C000 1473 aa5.87□□□□□ -1.47
ATXN3-240ENST00000556339 SHANK2Q9UPX8 1470 aa5.87□□□□□ -1.47
ATXN3-240ENST00000556339 ARHGEF5Q12774 1597 aa5.87□□□□□ -1.47
ATXN3-240ENST00000556339 UGGT1Q9NYU2 1555 aa5.87□□□□□ -1.47
ATXN3-240ENST00000556339 TCOF1Q13428 1488 aaKnown RBP5.86□□□□□ -1.47
ATXN3-240ENST00000556339 SYNGAP1Q96PV0 1343 aa5.86□□□□□ -1.47
ATXN3-240ENST00000556339 TMEM238LA0A1B0GVL6 79 aa5.86□□□□□ -1.47
ATXN3-240ENST00000556339 EIF1AYO14602 144 aaKnown RBP5.86□□□□□ -1.47
ATXN3-240ENST00000556339 PAPLNO95428 1278 aa5.86□□□□□ -1.47
ATXN3-240ENST00000556339 HCLS1P14317 486 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-240ENST00000556339 LTKP29376 864 aa5.86□□□□□ -1.47
ATXN3-240ENST00000556339 JAG1P78504 1218 aa5.86□□□□□ -1.47
ATXN3-240ENST00000556339 BNIP3Q12983 259 aa5.86□□□□□ -1.47
ATXN3-240ENST00000556339 IDI1Q13907 227 aa5.86□□□□□ -1.47
ATXN3-240ENST00000556339 COL19A1Q14993 1142 aa5.86□□□□□ -1.47
ATXN3-240ENST00000556339 RPS26P11Q5JNZ5 115 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-240ENST00000556339 FANCD2OSQ96PS1 177 aa5.86□□□□□ -1.47
ATXN3-240ENST00000556339 DNAJC25Q9H1X3 360 aa5.86□□□□□ -1.47
ATXN3-240ENST00000556339 RC3H2Q9HBD1 1191 aaKnown RBP5.86□□□□□ -1.47
ATXN3-240ENST00000556339 CRIM1Q9NZV1 1036 aa5.86□□□□□ -1.47
ATXN3-240ENST00000556339 ZNF142P52746 1687 aaPredicted RBP5.85□□□□□ -1.47
ATXN3-240ENST00000556339 MAP3K1Q13233 1512 aa5.85□□□□□ -1.47
ATXN3-240ENST00000556339 DUOX2Q9NRD8 1548 aa5.85□□□□□ -1.47
ATXN3-240ENST00000556339 GSTP1P09211 210 aaKnown RBP5.85□□□□□ -1.47
ATXN3-240ENST00000556339 FCGRTP55899 365 aa5.85□□□□□ -1.47
ATXN3-240ENST00000556339 TTLL4Q14679 1199 aa5.85□□□□□ -1.47
ATXN3-240ENST00000556339 PKN1Q16512 942 aa5.85□□□□□ -1.47
ATXN3-240ENST00000556339 ZNF648Q5T619 568 aaPredicted RBP5.85□□□□□ -1.47
ATXN3-240ENST00000556339 PRPF40BQ6NWY9 871 aaKnown RBP5.85□□□□□ -1.47
ATXN3-240ENST00000556339 SPRED2Q7Z698 418 aa5.85□□□□□ -1.47
ATXN3-240ENST00000556339 C14orf37Q86TY3 774 aa5.85□□□□□ -1.47
ATXN3-240ENST00000556339 PI4K2BQ8TCG2 481 aa5.85□□□□□ -1.47
ATXN3-240ENST00000556339 WDR89Q96FK6 387 aaPredicted RBP5.85□□□□□ -1.47
ATXN3-240ENST00000556339 CITED4Q96RK1 184 aa5.85□□□□□ -1.47
ATXN3-240ENST00000556339 SLC26A8Q96RN1 970 aa5.85□□□□□ -1.47
ATXN3-240ENST00000556339 FAM129BQ96TA1 746 aa5.85□□□□□ -1.47
ATXN3-240ENST00000556339 PCGF6Q9BYE7 350 aa5.85□□□□□ -1.47
ATXN3-240ENST00000556339 NLRP2Q9NX02 1062 aa5.85□□□□□ -1.47
ATXN3-240ENST00000556339 GTF3C3Q9Y5Q9 886 aa5.85□□□□□ -1.47
ATXN3-240ENST00000556339 ABCC5O15440 1437 aa5.84□□□□□ -1.47
ATXN3-240ENST00000556339 ITIH2P19823 946 aa5.84□□□□□ -1.47
ATXN3-240ENST00000556339 ARHGAP4P98171 946 aa5.84□□□□□ -1.47
ATXN3-240ENST00000556339 IFI16Q16666 785 aaKnown RBP5.84□□□□□ -1.47
ATXN3-240ENST00000556339 FAM168AQ92567 244 aa5.84□□□□□ -1.47
ATXN3-240ENST00000556339 ACSBG1Q96GR2 724 aa5.84□□□□□ -1.47
ATXN3-240ENST00000556339 PICK1Q9NRD5 415 aa5.84□□□□□ -1.47
ATXN3-240ENST00000556339 KRT82Q9NSB4 513 aa5.84□□□□□ -1.47
ATXN3-240ENST00000556339 SLC52A1Q9NWF4 448 aa5.84□□□□□ -1.47
ATXN3-240ENST00000556339 PCOLCE2Q9UKZ9 415 aa5.84□□□□□ -1.47
ATXN3-240ENST00000556339 POLR1AO95602 1720 aaPredicted RBP5.84□□□□□ -1.47
ATXN3-240ENST00000556339 PTPN23Q9H3S7 1636 aa5.84□□□□□ -1.47
ATXN3-240ENST00000556339 SPATA31D1Q6ZQQ2 1576 aa5.84□□□□□ -1.48
ATXN3-240ENST00000556339 CPS1P31327 1500 aa5.84□□□□□ -1.48
ATXN3-240ENST00000556339 CEP152O94986 1710 aa5.83□□□□□ -1.48
ATXN3-240ENST00000556339 GPR182O15218 404 aa5.83□□□□□ -1.48
ATXN3-240ENST00000556339 CD8BP10966 210 aa5.83□□□□□ -1.48
ATXN3-240ENST00000556339 KCNA6P17658 529 aa5.83□□□□□ -1.48
ATXN3-240ENST00000556339 PRKCQQ04759 706 aa5.83□□□□□ -1.48
ATXN3-240ENST00000556339 FAAP100Q0VG06 881 aa5.83□□□□□ -1.48
ATXN3-240ENST00000556339 GRM2Q14416 872 aa5.83□□□□□ -1.48
ATXN3-240ENST00000556339 AOC3Q16853 763 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms