RNA–Protein interactions for RNA: ENST00000556264.1

SPTLC2-204, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-204ENST00000556264 MARCH6O60337 910 aa5.75□□□□□ -1.49
SPTLC2-204ENST00000556264 YARSP54577 528 aaKnown RBP5.75□□□□□ -1.49
SPTLC2-204ENST00000556264 ERVK-24P63145 666 aa5.75□□□□□ -1.49
SPTLC2-204ENST00000556264 AMPD3Q01432 767 aa5.75□□□□□ -1.49
SPTLC2-204ENST00000556264 ID3Q02535 119 aa5.75□□□□□ -1.49
SPTLC2-204ENST00000556264 SLC10A6Q3KNW5 377 aa5.75□□□□□ -1.49
SPTLC2-204ENST00000556264 FOXD4L6Q3SYB3 417 aaPredicted RBP5.75□□□□□ -1.49
SPTLC2-204ENST00000556264 AKAP4Q5JQC9 854 aa5.75□□□□□ -1.49
SPTLC2-204ENST00000556264 EXOSC6Q5RKV6 272 aaKnown RBP5.75□□□□□ -1.49
SPTLC2-204ENST00000556264 ZBTB37Q5TC79 503 aa5.75□□□□□ -1.49
SPTLC2-204ENST00000556264 FOXD4L3Q6VB84 417 aaPredicted RBP5.75□□□□□ -1.49
SPTLC2-204ENST00000556264 MAP4K3Q8IVH8 894 aa5.75□□□□□ -1.49
SPTLC2-204ENST00000556264 MCATQ8IVS2 390 aaKnown RBP5.75□□□□□ -1.49
SPTLC2-204ENST00000556264 NPAS3Q8IXF0 933 aa5.75□□□□□ -1.49
SPTLC2-204ENST00000556264 SYNPOQ8N3V7 929 aa5.75□□□□□ -1.49
SPTLC2-204ENST00000556264 ZBTB38Q8NAP3 1195 aaPredicted RBP5.75□□□□□ -1.49
SPTLC2-204ENST00000556264 TMEM87BQ96K49 555 aa5.75□□□□□ -1.49
SPTLC2-204ENST00000556264 PPP1R9AQ9ULJ8 1098 aa5.75□□□□□ -1.49
SPTLC2-204ENST00000556264 IQCA1LA6NCM1 817 aa5.74□□□□□ -1.49
SPTLC2-204ENST00000556264 FANCGO15287 622 aa5.74□□□□□ -1.49
SPTLC2-204ENST00000556264 ADCY3O60266 1144 aa5.74□□□□□ -1.49
SPTLC2-204ENST00000556264 DEAF1O75398 565 aaPredicted RBP5.74□□□□□ -1.49
SPTLC2-204ENST00000556264 ADAMTS2O95450 1211 aa5.74□□□□□ -1.49
SPTLC2-204ENST00000556264 VSIG8P0DPA2 414 aa5.74□□□□□ -1.49
SPTLC2-204ENST00000556264 DALRD3Q5D0E6 543 aaKnown RBP5.74□□□□□ -1.49
SPTLC2-204ENST00000556264 TMEM67Q5HYA8 995 aa5.74□□□□□ -1.49
SPTLC2-204ENST00000556264 ILDR2Q71H61 639 aa5.74□□□□□ -1.49
SPTLC2-204ENST00000556264 HID1Q8IV36 788 aa5.74□□□□□ -1.49
SPTLC2-204ENST00000556264 PHACTR4Q8IZ21 702 aa5.74□□□□□ -1.49
SPTLC2-204ENST00000556264 RPUSD2Q8IZ73 545 aaKnown RBP5.74□□□□□ -1.49
SPTLC2-204ENST00000556264 LRRC47Q8N1G4 583 aaKnown RBP5.74□□□□□ -1.49
SPTLC2-204ENST00000556264 ZNF507Q8TCN5 953 aa5.74□□□□□ -1.49
SPTLC2-204ENST00000556264 UBASH3BQ8TF42 649 aa5.74□□□□□ -1.49
SPTLC2-204ENST00000556264 DHRS1Q96LJ7 313 aa5.74□□□□□ -1.49
SPTLC2-204ENST00000556264 SLC26A8Q96RN1 970 aa5.74□□□□□ -1.49
SPTLC2-204ENST00000556264 KIF2CQ99661 725 aa5.74□□□□□ -1.49
SPTLC2-204ENST00000556264 EPN3Q9H201 632 aa5.74□□□□□ -1.49
SPTLC2-204ENST00000556264 PRDM6Q9NQX0 595 aa5.74□□□□□ -1.49
SPTLC2-204ENST00000556264 FAM86C1Q9NVL1 165 aa5.74□□□□□ -1.49
SPTLC2-204ENST00000556264 SHISA8B8ZZ34 492 aa5.73□□□□□ -1.49
SPTLC2-204ENST00000556264 RGS13O14921 159 aa5.73□□□□□ -1.49
SPTLC2-204ENST00000556264 TMPRSS2O15393 492 aa5.73□□□□□ -1.49
SPTLC2-204ENST00000556264 OIP5O43482 229 aa5.73□□□□□ -1.49
SPTLC2-204ENST00000556264 TP53P04637 393 aaPredicted RBP5.73□□□□□ -1.49
SPTLC2-204ENST00000556264 HCLS1P14317 486 aaPredicted RBP5.73□□□□□ -1.49
SPTLC2-204ENST00000556264 NID1P14543 1247 aa5.73□□□□□ -1.49
SPTLC2-204ENST00000556264 AMPD1P23109 780 aa5.73□□□□□ -1.49
SPTLC2-204ENST00000556264 CCNFP41002 786 aa5.73□□□□□ -1.49
SPTLC2-204ENST00000556264 PMS1P54277 932 aaKnown RBP5.73□□□□□ -1.49
SPTLC2-204ENST00000556264 KRT76Q01546 638 aa5.73□□□□□ -1.49
SPTLC2-204ENST00000556264 COL9A3Q14050 684 aaPredicted RBP5.73□□□□□ -1.49
SPTLC2-204ENST00000556264 LONRF2Q1L5Z9 754 aa5.73□□□□□ -1.49
SPTLC2-204ENST00000556264 SV2CQ496J9 727 aa5.73□□□□□ -1.49
SPTLC2-204ENST00000556264 SLC6A19Q695T7 634 aa5.73□□□□□ -1.49
SPTLC2-204ENST00000556264 TMEM192Q8IY95 271 aa5.73□□□□□ -1.49
SPTLC2-204ENST00000556264 SLFN12Q8IYM2 578 aa5.73□□□□□ -1.49
SPTLC2-204ENST00000556264 SLC6A18Q96N87 628 aa5.73□□□□□ -1.49
SPTLC2-204ENST00000556264 FBRSQ9HAH7 460 aa5.73□□□□□ -1.49
SPTLC2-204ENST00000556264 METTL14Q9HCE5 456 aaKnown RBP5.73□□□□□ -1.49
SPTLC2-204ENST00000556264 DISC1Q9NRI5 854 aa5.73□□□□□ -1.49
SPTLC2-204ENST00000556264 CRIM1Q9NZV1 1036 aa5.73□□□□□ -1.49
SPTLC2-204ENST00000556264 SYNGAP1Q96PV0 1343 aa5.73□□□□□ -1.49
SPTLC2-204ENST00000556264 UBOX5O94941 541 aa5.72□□□□□ -1.49
SPTLC2-204ENST00000556264 L1CAMP32004 1257 aa5.72□□□□□ -1.49
SPTLC2-204ENST00000556264 GBP1P32455 592 aa5.72□□□□□ -1.49
SPTLC2-204ENST00000556264 CBX2Q14781 532 aaPredicted RBP5.72□□□□□ -1.49
SPTLC2-204ENST00000556264 DUOXA2Q1HG44 320 aa5.72□□□□□ -1.49
SPTLC2-204ENST00000556264 BBS9Q3SYG4 887 aa5.72□□□□□ -1.49
SPTLC2-204ENST00000556264 ZC3H12BQ5HYM0 836 aaKnown RBP5.72□□□□□ -1.49
SPTLC2-204ENST00000556264 TRAPPC3LQ5T215 181 aa5.72□□□□□ -1.49
SPTLC2-204ENST00000556264 FOXB2Q5VYV0 432 aa5.72□□□□□ -1.49
SPTLC2-204ENST00000556264 CDC37L1Q7L3B6 337 aa5.72□□□□□ -1.49
SPTLC2-204ENST00000556264 PPFIBP1Q86W92 1011 aa5.72□□□□□ -1.49
SPTLC2-204ENST00000556264 MRPL41Q8IXM3 137 aaKnown RBP5.72□□□□□ -1.49
SPTLC2-204ENST00000556264 DHX37Q8IY37 1157 aaKnown RBP5.72□□□□□ -1.49
SPTLC2-204ENST00000556264 RNF214Q8ND24 703 aa5.72□□□□□ -1.49
SPTLC2-204ENST00000556264 SGSM3Q96HU1 749 aa5.72□□□□□ -1.49
SPTLC2-204ENST00000556264 CCDC74BQ96LY2 380 aa5.72□□□□□ -1.49
SPTLC2-204ENST00000556264 FANCD2OSQ96PS1 177 aa5.72□□□□□ -1.49
SPTLC2-204ENST00000556264 APBA2Q99767 749 aa5.72□□□□□ -1.49
SPTLC2-204ENST00000556264 DPH2Q9BQC3 489 aaPredicted RBP5.72□□□□□ -1.49
SPTLC2-204ENST00000556264 KLHL42Q9P2K6 505 aa5.72□□□□□ -1.49
SPTLC2-204ENST00000556264 SUCOQ9UBS9 1254 aaKnown RBP5.72□□□□□ -1.49
SPTLC2-204ENST00000556264 ERBB4Q15303 1308 aa5.72□□□□□ -1.49
SPTLC2-204ENST00000556264 A0A1W2PQU0 124 aa5.71□□□□□ -1.5
SPTLC2-204ENST00000556264 AGRPO00253 132 aa5.71□□□□□ -1.5
SPTLC2-204ENST00000556264 VIL1P09327 827 aaKnown RBP5.71□□□□□ -1.5
SPTLC2-204ENST00000556264 BCRP11274 1271 aa5.71□□□□□ -1.5
SPTLC2-204ENST00000556264 NTF4P34130 210 aa5.71□□□□□ -1.5
SPTLC2-204ENST00000556264 NKG7Q16617 165 aa5.71□□□□□ -1.5
SPTLC2-204ENST00000556264 TDRD10Q5VZ19 366 aaKnown RBP5.71□□□□□ -1.5
SPTLC2-204ENST00000556264 BAHD1Q8TBE0 780 aaPredicted RBP5.71□□□□□ -1.5
SPTLC2-204ENST00000556264 RUSC1Q9BVN2 902 aa5.71□□□□□ -1.5
SPTLC2-204ENST00000556264 TMPRSS13Q9BYE2 586 aa5.71□□□□□ -1.5
SPTLC2-204ENST00000556264 DDX56Q9NY93 547 aaKnown RBP5.71□□□□□ -1.5
SPTLC2-204ENST00000556264 SUSD2Q9UGT4 822 aa5.71□□□□□ -1.5
SPTLC2-204ENST00000556264 AP4E1Q9UPM8 1137 aa5.71□□□□□ -1.5
SPTLC2-204ENST00000556264 PLAAQ9Y263 795 aa5.71□□□□□ -1.5
SPTLC2-204ENST00000556264 CCDC163A0A0D9SF12 145 aa5.7□□□□□ -1.5
SPTLC2-204ENST00000556264 ANKRD34BA5PLL1 514 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms