RNA–Protein interactions for RNA: ENST00000556217.5

SUPT16H-205, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 1,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-205ENST00000556217 ATF7IPQ6VMQ6 1270 aa18.95■□□□□ 0.62
SUPT16H-205ENST00000556217 FOXP4Q8IVH2 680 aaPredicted RBP18.95■□□□□ 0.62
SUPT16H-205ENST00000556217 C7orf61Q8IZ16 206 aa18.95■□□□□ 0.62
SUPT16H-205ENST00000556217 DIS3LQ8TF46 1054 aaKnown RBP18.95■□□□□ 0.62
SUPT16H-205ENST00000556217 PNMA6EA0A0J9YXQ4 647 aa18.94■□□□□ 0.62
SUPT16H-205ENST00000556217 IGSF3O75054 1194 aa18.94■□□□□ 0.62
SUPT16H-205ENST00000556217 HOXA7P31268 230 aaPredicted RBP18.94■□□□□ 0.62
SUPT16H-205ENST00000556217 PPP4CP60510 307 aa18.94■□□□□ 0.62
SUPT16H-205ENST00000556217 GPRC5AQ8NFJ5 357 aa18.94■□□□□ 0.62
SUPT16H-205ENST00000556217 SOCS4Q8WXH5 440 aa18.94■□□□□ 0.62
SUPT16H-205ENST00000556217 FRAT1Q92837 279 aaPredicted RBP18.94■□□□□ 0.62
SUPT16H-205ENST00000556217 GPR108Q9NPR9 543 aa18.94■□□□□ 0.62
SUPT16H-205ENST00000556217 ZMYND8Q9ULU4 1186 aaPredicted RBP18.94■□□□□ 0.62
SUPT16H-205ENST00000556217 DDX60LQ5H9U9 1706 aaKnown RBP18.94■□□□□ 0.62
SUPT16H-205ENST00000556217 USP17L10C9JJH3 530 aa18.93■□□□□ 0.62
SUPT16H-205ENST00000556217 OS9Q13438 667 aaPredicted RBP18.93■□□□□ 0.62
SUPT16H-205ENST00000556217 PDE3AQ14432 1141 aa18.93■□□□□ 0.62
SUPT16H-205ENST00000556217 MAPKAPK5Q8IW41 473 aa18.93■□□□□ 0.62
SUPT16H-205ENST00000556217 CCAR1Q8IX12 1150 aaKnown RBP18.93■□□□□ 0.62
SUPT16H-205ENST00000556217 TRMT44Q8IYL2 757 aaKnown RBP18.93■□□□□ 0.62
SUPT16H-205ENST00000556217 TDHQ8IZJ6 230 aa18.93■□□□□ 0.62
SUPT16H-205ENST00000556217 GTF3C2Q8WUA4 911 aaPredicted RBP18.93■□□□□ 0.62
SUPT16H-205ENST00000556217 TGFBRAP1Q8WUH2 860 aa18.93■□□□□ 0.62
SUPT16H-205ENST00000556217 NUDT12Q9BQG2 462 aa18.93■□□□□ 0.62
SUPT16H-205ENST00000556217 SNRKQ9NRH2 765 aa18.93■□□□□ 0.62
SUPT16H-205ENST00000556217 FLT1P17948 1338 aa18.93■□□□□ 0.62
SUPT16H-205ENST00000556217 HLA-DOAP06340 250 aa18.92■□□□□ 0.62
SUPT16H-205ENST00000556217 XRCC5P13010 732 aaKnown RBP18.92■□□□□ 0.62
SUPT16H-205ENST00000556217 MAPK4P31152 587 aa18.92■□□□□ 0.62
SUPT16H-205ENST00000556217 HERVK_113P62684 666 aa18.92■□□□□ 0.62
SUPT16H-205ENST00000556217 TNNI3KQ59H18 835 aa18.92■□□□□ 0.62
SUPT16H-205ENST00000556217 METTL16Q86W50 562 aaKnown RBP18.92■□□□□ 0.62
SUPT16H-205ENST00000556217 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.92■□□□□ 0.62
SUPT16H-205ENST00000556217 TRIB2Q92519 343 aa18.92■□□□□ 0.62
SUPT16H-205ENST00000556217 P2RX7Q99572 595 aaKnown RBP18.92■□□□□ 0.62
SUPT16H-205ENST00000556217 C11orf49Q9H6J7 331 aa18.92■□□□□ 0.62
SUPT16H-205ENST00000556217 FPGT-TNNI3KV9GXZ4 949 aa18.92■□□□□ 0.62
SUPT16H-205ENST00000556217 MYO5AQ9Y4I1 1855 aaKnown RBP18.92■□□□□ 0.62
SUPT16H-205ENST00000556217 CYP2B6P20813 491 aa18.91■□□□□ 0.62
SUPT16H-205ENST00000556217 MAGEA10P43363 369 aaPredicted RBP18.91■□□□□ 0.62
SUPT16H-205ENST00000556217 TRIM32Q13049 653 aa18.91■□□□□ 0.62
SUPT16H-205ENST00000556217 CLUAP1Q96AJ1 413 aa18.91■□□□□ 0.62
SUPT16H-205ENST00000556217 OGDHLQ9ULD0 1010 aa18.91■□□□□ 0.62
SUPT16H-205ENST00000556217 PALD1Q9ULE6 856 aa18.91■□□□□ 0.62
SUPT16H-205ENST00000556217 ZBTB21Q9ULJ3 1066 aa18.91■□□□□ 0.62
SUPT16H-205ENST00000556217 MYH1P12882 1939 aa18.9■□□□□ 0.62
SUPT16H-205ENST00000556217 PRKAR2AP13861 404 aaKnown RBP18.9■□□□□ 0.62
SUPT16H-205ENST00000556217 MAP3K21Q5TCX8 1036 aa18.9■□□□□ 0.62
SUPT16H-205ENST00000556217 ZNF512BQ96KM6 892 aaPredicted RBP18.9■□□□□ 0.62
SUPT16H-205ENST00000556217 UBE2OQ9C0C9 1292 aaKnown RBP18.9■□□□□ 0.62
SUPT16H-205ENST00000556217 GDF11O95390 407 aa18.89■□□□□ 0.61
SUPT16H-205ENST00000556217 CYP2E1P05181 493 aaPredicted RBP18.89■□□□□ 0.61
SUPT16H-205ENST00000556217 ZKSCAN1P17029 563 aaPredicted RBP18.89■□□□□ 0.61
SUPT16H-205ENST00000556217 ADGRA1Q86SQ6 560 aa18.89■□□□□ 0.61
SUPT16H-205ENST00000556217 CERS3Q8IU89 383 aa18.89■□□□□ 0.61
SUPT16H-205ENST00000556217 DBNDD2Q9BQY9 259 aa18.89■□□□□ 0.61
SUPT16H-205ENST00000556217 DNAJC18Q9H819 358 aa18.89■□□□□ 0.61
SUPT16H-205ENST00000556217 TXNRD2Q9NNW7 524 aa18.89■□□□□ 0.61
SUPT16H-205ENST00000556217 CCER2I3L3R5 266 aa18.88■□□□□ 0.61
SUPT16H-205ENST00000556217 BCAR3O75815 825 aa18.88■□□□□ 0.61
SUPT16H-205ENST00000556217 SYN1P17600 705 aa18.88■□□□□ 0.61
SUPT16H-205ENST00000556217 RGS2P41220 211 aa18.88■□□□□ 0.61
SUPT16H-205ENST00000556217 ERVK-9P63128 1117 aa18.88■□□□□ 0.61
SUPT16H-205ENST00000556217 ERVK-24P63145 666 aa18.88■□□□□ 0.61
SUPT16H-205ENST00000556217 JAG1P78504 1218 aa18.88■□□□□ 0.61
SUPT16H-205ENST00000556217 POLA2Q14181 598 aa18.88■□□□□ 0.61
SUPT16H-205ENST00000556217 USP17L2Q6R6M4 530 aa18.88■□□□□ 0.61
SUPT16H-205ENST00000556217 CWC22Q9HCG8 908 aaKnown RBP18.88■□□□□ 0.61
SUPT16H-205ENST00000556217 RBPJLQ9UBG7 517 aa18.88■□□□□ 0.61
SUPT16H-205ENST00000556217 SAP30BPQ9UHR5 308 aaKnown RBP18.88■□□□□ 0.61
SUPT16H-205ENST00000556217 TNNQ9UQP3 1299 aa18.88■□□□□ 0.61
SUPT16H-205ENST00000556217 SURF6O75683 361 aaKnown RBP18.87■□□□□ 0.61
SUPT16H-205ENST00000556217 ZKSCAN2Q63HK3 967 aa18.87■□□□□ 0.61
SUPT16H-205ENST00000556217 SSH3Q8TE77 659 aa18.87■□□□□ 0.61
SUPT16H-205ENST00000556217 PAGR1Q9BTK6 254 aa18.87■□□□□ 0.61
SUPT16H-205ENST00000556217 GLRX3O76003 335 aaKnown RBP18.86■□□□□ 0.61
SUPT16H-205ENST00000556217 CYP7A1P22680 504 aa18.86■□□□□ 0.61
SUPT16H-205ENST00000556217 ZAP70P43403 619 aa18.86■□□□□ 0.61
SUPT16H-205ENST00000556217 ATP8B2P98198 1209 aa18.86■□□□□ 0.61
SUPT16H-205ENST00000556217 GPR142Q7Z601 462 aa18.86■□□□□ 0.61
SUPT16H-205ENST00000556217 PLEKHH3Q7Z736 793 aa18.86■□□□□ 0.61
SUPT16H-205ENST00000556217 TMEM57Q8N5G2 664 aa18.86■□□□□ 0.61
SUPT16H-205ENST00000556217 FEZ1Q99689 392 aa18.86■□□□□ 0.61
SUPT16H-205ENST00000556217 APBA2Q99767 749 aa18.86■□□□□ 0.61
SUPT16H-205ENST00000556217 PEX10O60683 326 aa18.85■□□□□ 0.61
SUPT16H-205ENST00000556217 CCNA1P78396 465 aa18.85■□□□□ 0.61
SUPT16H-205ENST00000556217 CACNB2Q08289 660 aaPredicted RBP18.85■□□□□ 0.61
SUPT16H-205ENST00000556217 SHROOM1Q2M3G4 852 aaPredicted RBP18.85■□□□□ 0.61
SUPT16H-205ENST00000556217 USP6NLQ92738 828 aa18.85■□□□□ 0.61
SUPT16H-205ENST00000556217 PORCNQ9H237 461 aa18.85■□□□□ 0.61
SUPT16H-205ENST00000556217 PIH1D3Q9NQM4 214 aaKnown RBP18.85■□□□□ 0.61
SUPT16H-205ENST00000556217 EMILIN3Q9NT22 766 aa18.85■□□□□ 0.61
SUPT16H-205ENST00000556217 USP17L15C9J2P7 530 aa18.84■□□□□ 0.61
SUPT16H-205ENST00000556217 USP17L13C9JLJ4 530 aa18.84■□□□□ 0.61
SUPT16H-205ENST00000556217 USP17L11C9JVI0 530 aa18.84■□□□□ 0.61
SUPT16H-205ENST00000556217 USP17L18D6R9N7 530 aa18.84■□□□□ 0.61
SUPT16H-205ENST00000556217 USP17L22D6RA61 530 aa18.84■□□□□ 0.61
SUPT16H-205ENST00000556217 USP17L17D6RBQ6 530 aa18.84■□□□□ 0.61
SUPT16H-205ENST00000556217 USP17L19D6RCP7 530 aa18.84■□□□□ 0.61
SUPT16H-205ENST00000556217 USP17L20D6RJB6 530 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms