RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 CYP2D6P10635 497 aa16.89■□□□□ 0.29
NEK9-209ENST00000556170 NAPAP54920 295 aa16.89■□□□□ 0.29
NEK9-209ENST00000556170 DIXDC1Q155Q3 683 aa16.89■□□□□ 0.29
NEK9-209ENST00000556170 RASGRP4Q8TDF6 673 aa16.89■□□□□ 0.29
NEK9-209ENST00000556170 NAA30Q147X3 362 aaPredicted RBP16.89■□□□□ 0.29
NEK9-209ENST00000556170 CSRNP2Q9H175 543 aa16.89■□□□□ 0.29
NEK9-209ENST00000556170 ZNF287Q9HBT7 754 aa16.89■□□□□ 0.29
NEK9-209ENST00000556170 CALM1P0DP23 149 aa16.88■□□□□ 0.29
NEK9-209ENST00000556170 CALM2P0DP24 149 aa16.88■□□□□ 0.29
NEK9-209ENST00000556170 CALM3P0DP25 149 aa16.88■□□□□ 0.29
NEK9-209ENST00000556170 TERF1P54274 439 aa16.88■□□□□ 0.29
NEK9-209ENST00000556170 KIF4BQ2VIQ3 1234 aa16.88■□□□□ 0.29
NEK9-209ENST00000556170 ZNF34Q8IZ26 560 aa16.88■□□□□ 0.29
NEK9-209ENST00000556170 VPS16Q9H269 839 aa16.88■□□□□ 0.29
NEK9-209ENST00000556170 FMN2Q9NZ56 1722 aa16.88■□□□□ 0.29
NEK9-209ENST00000556170 FMNL1O95466 1100 aaPredicted RBP16.88■□□□□ 0.29
NEK9-209ENST00000556170 LIFRP42702 1097 aa16.88■□□□□ 0.29
NEK9-209ENST00000556170 UBE4AQ14139 1066 aa16.88■□□□□ 0.29
NEK9-209ENST00000556170 CRACR2BQ8N4Y2 399 aaPredicted RBP16.88■□□□□ 0.29
NEK9-209ENST00000556170 KRT18P05783 430 aaKnown RBP16.88■□□□□ 0.29
NEK9-209ENST00000556170 ERCC3P19447 782 aa16.88■□□□□ 0.29
NEK9-209ENST00000556170 CASQ1P31415 396 aa16.88■□□□□ 0.29
NEK9-209ENST00000556170 GPIHBP1Q8IV16 184 aa16.88■□□□□ 0.29
NEK9-209ENST00000556170 USP17L8P0C7I0 530 aa16.87■□□□□ 0.29
NEK9-209ENST00000556170 LETM2Q2VYF4 491 aa16.87■□□□□ 0.29
NEK9-209ENST00000556170 CCDC12Q8WUD4 166 aaPredicted RBP16.87■□□□□ 0.29
NEK9-209ENST00000556170 DYNLL2Q96FJ2 89 aa16.87■□□□□ 0.29
NEK9-209ENST00000556170 EPSTI1Q96J88 318 aa16.87■□□□□ 0.29
NEK9-209ENST00000556170 TCP11L1Q9NUJ3 509 aa16.87■□□□□ 0.29
NEK9-209ENST00000556170 MINPP1Q9UNW1 487 aa16.87■□□□□ 0.29
NEK9-209ENST00000556170 LTN1O94822 1766 aa16.87■□□□□ 0.29
NEK9-209ENST00000556170 MMP1P03956 469 aa16.87■□□□□ 0.29
NEK9-209ENST00000556170 CCDC178Q5BJE1 867 aa16.87■□□□□ 0.29
NEK9-209ENST00000556170 IGDCC4Q8TDY8 1250 aa16.87■□□□□ 0.29
NEK9-209ENST00000556170 IL17RAQ96F46 866 aa16.87■□□□□ 0.29
NEK9-209ENST00000556170 RBM6P78332 1123 aaKnown RBP16.87■□□□□ 0.29
NEK9-209ENST00000556170 TEX11Q8IYF3 940 aa16.87■□□□□ 0.29
NEK9-209ENST00000556170 IQUBQ8NA54 791 aa16.87■□□□□ 0.29
NEK9-209ENST00000556170 BAZ2BQ9UIF8 2168 aaKnown RBP16.87■□□□□ 0.29
NEK9-209ENST00000556170 USP27XA6NNY8 438 aa16.87■□□□□ 0.29
NEK9-209ENST00000556170 IQCB1Q15051 598 aa16.87■□□□□ 0.29
NEK9-209ENST00000556170 ENOX2Q16206 610 aaKnown RBP16.87■□□□□ 0.29
NEK9-209ENST00000556170 TBC1D9BQ66K14 1250 aa16.87■□□□□ 0.29
NEK9-209ENST00000556170 MECOMQ03112 1051 aa16.86■□□□□ 0.29
NEK9-209ENST00000556170 PTGDRQ13258 359 aa16.86■□□□□ 0.29
NEK9-209ENST00000556170 SHC4Q6S5L8 630 aa16.86■□□□□ 0.29
NEK9-209ENST00000556170 ZNF804AQ7Z570 1209 aa16.86■□□□□ 0.29
NEK9-209ENST00000556170 TRIM47Q96LD4 638 aa16.86■□□□□ 0.29
NEK9-209ENST00000556170 ZNF215Q9UL58 517 aaPredicted RBP16.86■□□□□ 0.29
NEK9-209ENST00000556170 TCHHQ07283 1943 aa16.86■□□□□ 0.29
NEK9-209ENST00000556170 FAM205CA6NFA0 338 aa16.86■□□□□ 0.29
NEK9-209ENST00000556170 SLU7O95391 586 aaKnown RBP16.86■□□□□ 0.29
NEK9-209ENST00000556170 ARID4AP29374 1257 aaPredicted RBP16.86■□□□□ 0.29
NEK9-209ENST00000556170 BAG1Q99933 345 aaPredicted RBP16.86■□□□□ 0.29
NEK9-209ENST00000556170 RNF216Q9NWF9 866 aaPredicted RBP16.86■□□□□ 0.29
NEK9-209ENST00000556170 ZNF804BA4D1E1 1349 aa16.86■□□□□ 0.29
NEK9-209ENST00000556170 SMIM22K7EJ46 135 aa16.86■□□□□ 0.29
NEK9-209ENST00000556170 SMAP1Q8IYB5 467 aaPredicted RBP16.86■□□□□ 0.29
NEK9-209ENST00000556170 DESI2Q9BSY9 194 aa16.86■□□□□ 0.29
NEK9-209ENST00000556170 PLA2G4DQ86XP0 818 aa16.85■□□□□ 0.29
NEK9-209ENST00000556170 ZNF622Q969S3 477 aaKnown RBP eCLIP16.85■□□□□ 0.29
NEK9-209ENST00000556170 RBM28Q9NW13 759 aaKnown RBP16.85■□□□□ 0.29
NEK9-209ENST00000556170 USP21Q9UK80 565 aa16.85■□□□□ 0.29
NEK9-209ENST00000556170 CTNND2Q9UQB3 1225 aa16.85■□□□□ 0.29
NEK9-209ENST00000556170 ELF2Q15723 593 aa16.85■□□□□ 0.29
NEK9-209ENST00000556170 CAGE1Q8TC20 777 aa16.85■□□□□ 0.29
NEK9-209ENST00000556170 NOC3LQ8WTT2 800 aaKnown RBP16.85■□□□□ 0.29
NEK9-209ENST00000556170 CPVLQ9H3G5 476 aa16.85■□□□□ 0.29
NEK9-209ENST00000556170 ZNHIT6Q9NWK9 470 aaKnown RBP16.85■□□□□ 0.29
NEK9-209ENST00000556170 CAMTA2O94983 1202 aa16.85■□□□□ 0.29
NEK9-209ENST00000556170 DTHD1Q6ZMT9 781 aa16.85■□□□□ 0.29
NEK9-209ENST00000556170 PAXIP1Q6ZW49 1069 aaPredicted RBP16.84■□□□□ 0.29
NEK9-209ENST00000556170 DHX40Q8IX18 779 aaKnown RBP16.84■□□□□ 0.29
NEK9-209ENST00000556170 PNMA1Q8ND90 353 aa16.84■□□□□ 0.29
NEK9-209ENST00000556170 SYMPKQ92797 1274 aaKnown RBP16.84■□□□□ 0.29
NEK9-209ENST00000556170 KIF5CO60282 957 aa16.84■□□□□ 0.29
NEK9-209ENST00000556170 BMP15O95972 392 aa16.84■□□□□ 0.29
NEK9-209ENST00000556170 JAKMIP3Q5VZ66 844 aa16.84■□□□□ 0.29
NEK9-209ENST00000556170 USP49Q70CQ1 688 aa16.84■□□□□ 0.29
NEK9-209ENST00000556170 ENAHQ8N8S7 591 aaPredicted RBP16.84■□□□□ 0.29
NEK9-209ENST00000556170 TOPAZ1Q8N9V7 1692 aa16.84■□□□□ 0.29
NEK9-209ENST00000556170 PPP6R2O75170 966 aa16.84■□□□□ 0.29
NEK9-209ENST00000556170 CALML3P27482 149 aa16.84■□□□□ 0.29
NEK9-209ENST00000556170 FAM196AQ6ZSG2 479 aa16.84■□□□□ 0.29
NEK9-209ENST00000556170 MLKLQ8NB16 471 aa16.84■□□□□ 0.29
NEK9-209ENST00000556170 TRERF1Q96PN7 1200 aa16.84■□□□□ 0.29
NEK9-209ENST00000556170 CCDC66A2RUB6 948 aa16.83■□□□□ 0.29
NEK9-209ENST00000556170 MTIF2P46199 727 aaKnown RBP16.83■□□□□ 0.29
NEK9-209ENST00000556170 GSTO1P78417 241 aa16.83■□□□□ 0.29
NEK9-209ENST00000556170 ST5P78524 1137 aa16.83■□□□□ 0.29
NEK9-209ENST00000556170 GRIN1Q05586 938 aa16.83■□□□□ 0.29
NEK9-209ENST00000556170 IGSF22Q8N9C0 903 aa16.83■□□□□ 0.29
NEK9-209ENST00000556170 FAM84BQ96KN1 310 aaPredicted RBP16.83■□□□□ 0.29
NEK9-209ENST00000556170 DEF6Q9H4E7 631 aa16.83■□□□□ 0.29
NEK9-209ENST00000556170 COL5A2P05997 1499 aaPredicted RBP16.83■□□□□ 0.29
NEK9-209ENST00000556170 INTS5Q6P9B9 1019 aaKnown RBP16.83■□□□□ 0.28
NEK9-209ENST00000556170 ILDR1Q86SU0 546 aaPredicted RBP16.83■□□□□ 0.28
NEK9-209ENST00000556170 ENGASEQ8NFI3 743 aa16.83■□□□□ 0.28
NEK9-209ENST00000556170 GPCPD1Q9NPB8 672 aa16.83■□□□□ 0.28
NEK9-209ENST00000556170 SAMSN1Q9NSI8 373 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 279.3 ms