RNA–Protein interactions for RNA: ENST00000556098.1

CHGA-205, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-205ENST00000556098 TBC1D9Q6ZT07 1266 aa13.34□□□□□ -0.27
CHGA-205ENST00000556098 SH3BP5LQ7L8J4 393 aa13.34□□□□□ -0.27
CHGA-205ENST00000556098 C11orf49Q9H6J7 331 aa13.34□□□□□ -0.27
CHGA-205ENST00000556098 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.34□□□□□ -0.27
CHGA-205ENST00000556098 HMX1Q9NP08 348 aaPredicted RBP13.34□□□□□ -0.27
CHGA-205ENST00000556098 DENND2AQ9ULE3 1009 aa13.34□□□□□ -0.27
CHGA-205ENST00000556098 AGTPBP1Q9UPW5 1226 aa13.34□□□□□ -0.27
CHGA-205ENST00000556098 MAST2Q6P0Q8 1798 aa13.34□□□□□ -0.27
CHGA-205ENST00000556098 RFX7Q2KHR2 1363 aa13.33□□□□□ -0.27
CHGA-205ENST00000556098 HMGCRP04035 888 aa13.33□□□□□ -0.28
CHGA-205ENST00000556098 SDSP20132 328 aa13.33□□□□□ -0.28
CHGA-205ENST00000556098 IL15P40933 162 aaPredicted RBP13.33□□□□□ -0.28
CHGA-205ENST00000556098 MNX1P50219 401 aaPredicted RBP13.33□□□□□ -0.28
CHGA-205ENST00000556098 C22orf23Q9BZE7 217 aa13.33□□□□□ -0.28
CHGA-205ENST00000556098 NBPF3Q9H094 633 aa13.33□□□□□ -0.28
CHGA-205ENST00000556098 DDX4Q9NQI0 724 aaKnown RBP13.33□□□□□ -0.28
CHGA-205ENST00000556098 ECHDC1Q9NTX5 307 aa13.33□□□□□ -0.28
CHGA-205ENST00000556098 CEP126Q9P2H0 1117 aa13.33□□□□□ -0.28
CHGA-205ENST00000556098 ATRNL1Q5VV63 1379 aa13.32□□□□□ -0.28
CHGA-205ENST00000556098 HIP1O00291 1037 aa13.32□□□□□ -0.28
CHGA-205ENST00000556098 CTNND1O60716 968 aaKnown RBP13.32□□□□□ -0.28
CHGA-205ENST00000556098 ENTPD3O75355 529 aa13.32□□□□□ -0.28
CHGA-205ENST00000556098 ADORA1P30542 326 aa13.32□□□□□ -0.28
CHGA-205ENST00000556098 HMGCS2P54868 508 aa13.32□□□□□ -0.28
CHGA-205ENST00000556098 SPP2Q13103 211 aa13.32□□□□□ -0.28
CHGA-205ENST00000556098 FAM161BQ96MY7 647 aa13.32□□□□□ -0.28
CHGA-205ENST00000556098 GDF15Q99988 308 aa13.32□□□□□ -0.28
CHGA-205ENST00000556098 CRISPLD2Q9H0B8 497 aa13.32□□□□□ -0.28
CHGA-205ENST00000556098 CWC22Q9HCG8 908 aaKnown RBP13.32□□□□□ -0.28
CHGA-205ENST00000556098 DAXXQ9UER7 740 aaPredicted RBP13.32□□□□□ -0.28
CHGA-205ENST00000556098 SLC45A1Q9Y2W3 748 aa13.32□□□□□ -0.28
CHGA-205ENST00000556098 MYH7P12883 1935 aa13.32□□□□□ -0.28
CHGA-205ENST00000556098 RANBP2P49792 3224 aaKnown RBP13.32□□□□□ -0.28
CHGA-205ENST00000556098 MYH8P13535 1937 aa13.31□□□□□ -0.28
CHGA-205ENST00000556098 MDM2Q00987 491 aaPredicted RBP13.31□□□□□ -0.28
CHGA-205ENST00000556098 FAM110CQ1W6H9 321 aa13.31□□□□□ -0.28
CHGA-205ENST00000556098 ATG9AQ7Z3C6 839 aa13.31□□□□□ -0.28
CHGA-205ENST00000556098 CCAR1Q8IX12 1150 aaKnown RBP13.31□□□□□ -0.28
CHGA-205ENST00000556098 SLF2Q8IX21 1173 aa13.31□□□□□ -0.28
CHGA-205ENST00000556098 TDHQ8IZJ6 230 aa13.31□□□□□ -0.28
CHGA-205ENST00000556098 ZGPATQ8N5A5 531 aaKnown RBP13.31□□□□□ -0.28
CHGA-205ENST00000556098 OTUD7AQ8TE49 926 aaPredicted RBP13.31□□□□□ -0.28
CHGA-205ENST00000556098 IL1RAPL2Q9NP60 686 aa13.31□□□□□ -0.28
CHGA-205ENST00000556098 RPTORQ8N122 1335 aa13.31□□□□□ -0.28
CHGA-205ENST00000556098 LTBP2Q14767 1821 aa13.3□□□□□ -0.28
CHGA-205ENST00000556098 PEX10O60683 326 aa13.3□□□□□ -0.28
CHGA-205ENST00000556098 MFAP1P55081 439 aaKnown RBP13.3□□□□□ -0.28
CHGA-205ENST00000556098 IRX3P78415 501 aaPredicted RBP13.3□□□□□ -0.28
CHGA-205ENST00000556098 PABPC4Q13310 644 aaKnown RBP eCLIP13.3□□□□□ -0.28
CHGA-205ENST00000556098 AACSQ86V21 672 aa13.3□□□□□ -0.28
CHGA-205ENST00000556098 ANKLE1Q8NAG6 615 aa13.3□□□□□ -0.28
CHGA-205ENST00000556098 PI4K2BQ8TCG2 481 aa13.3□□□□□ -0.28
CHGA-205ENST00000556098 TRIB2Q92519 343 aa13.3□□□□□ -0.28
CHGA-205ENST00000556098 IDI2Q9BXS1 227 aa13.3□□□□□ -0.28
CHGA-205ENST00000556098 PA2G4Q9UQ80 394 aaKnown RBP13.3□□□□□ -0.28
CHGA-205ENST00000556098 AKAP2Q9Y2D5 859 aa13.3□□□□□ -0.28
CHGA-205ENST00000556098 MROH7-TTC4A0A0A0MT08 1334 aa13.3□□□□□ -0.28
CHGA-205ENST00000556098 PRKAR2AP13861 404 aaKnown RBP13.29□□□□□ -0.28
CHGA-205ENST00000556098 BMP8BP34820 402 aa13.29□□□□□ -0.28
CHGA-205ENST00000556098 CCDC102BQ68D86 513 aa13.29□□□□□ -0.28
CHGA-205ENST00000556098 ERICH6Q7L0X2 663 aa13.29□□□□□ -0.28
CHGA-205ENST00000556098 PROCA1Q8NCQ7 364 aaPredicted RBP13.29□□□□□ -0.28
CHGA-205ENST00000556098 ZNF280CQ8ND82 737 aa13.29□□□□□ -0.28
CHGA-205ENST00000556098 RUFY2Q8WXA3 655 aa13.29□□□□□ -0.28
CHGA-205ENST00000556098 ASCC2Q9H1I8 757 aaPredicted RBP13.29□□□□□ -0.28
CHGA-205ENST00000556098 MTMR10Q9NXD2 777 aa13.29□□□□□ -0.28
CHGA-205ENST00000556098 STXBP5LQ9Y2K9 1186 aa13.29□□□□□ -0.28
CHGA-205ENST00000556098 SALL1Q9NSC2 1324 aa13.29□□□□□ -0.28
CHGA-205ENST00000556098 TRIM6-TRIM34B2RNG4 842 aa13.28□□□□□ -0.28
CHGA-205ENST00000556098 SEMA3EO15041 775 aa13.28□□□□□ -0.28
CHGA-205ENST00000556098 SEC24BO95487 1268 aa13.28□□□□□ -0.28
CHGA-205ENST00000556098 GCLCP48506 637 aaPredicted RBP13.28□□□□□ -0.28
CHGA-205ENST00000556098 RASGRF1Q13972 1273 aa13.28□□□□□ -0.28
CHGA-205ENST00000556098 TNNI3KQ59H18 835 aa13.28□□□□□ -0.28
CHGA-205ENST00000556098 SPTY2D1Q68D10 685 aaPredicted RBP13.28□□□□□ -0.28
CHGA-205ENST00000556098 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.28□□□□□ -0.28
CHGA-205ENST00000556098 EVI5LQ96CN4 794 aa13.28□□□□□ -0.28
CHGA-205ENST00000556098 PAGR1Q9BTK6 254 aa13.28□□□□□ -0.28
CHGA-205ENST00000556098 FPGT-TNNI3KV9GXZ4 949 aa13.28□□□□□ -0.28
CHGA-205ENST00000556098 GAKO14976 1311 aa13.28□□□□□ -0.28
CHGA-205ENST00000556098 RAD50Q92878 1312 aa13.28□□□□□ -0.28
CHGA-205ENST00000556098 ZKSCAN1P17029 563 aaPredicted RBP13.27□□□□□ -0.29
CHGA-205ENST00000556098 CAPN2P17655 700 aa13.27□□□□□ -0.29
CHGA-205ENST00000556098 MCCP23508 829 aa13.27□□□□□ -0.29
CHGA-205ENST00000556098 TIMM10P62072 90 aa13.27□□□□□ -0.29
CHGA-205ENST00000556098 MECOMQ03112 1051 aa13.27□□□□□ -0.29
CHGA-205ENST00000556098 MTMR2Q13614 643 aa13.27□□□□□ -0.29
CHGA-205ENST00000556098 WDR78Q5VTH9 848 aa13.27□□□□□ -0.29
CHGA-205ENST00000556098 NEUROD6Q96NK8 337 aa13.27□□□□□ -0.29
CHGA-205ENST00000556098 COL25A1Q9BXS0 654 aaPredicted RBP13.27□□□□□ -0.29
CHGA-205ENST00000556098 TRIM34Q9BYJ4 488 aa13.27□□□□□ -0.29
CHGA-205ENST00000556098 AS3MTQ9HBK9 375 aa13.27□□□□□ -0.29
CHGA-205ENST00000556098 TMOD4Q9NZQ9 345 aa13.27□□□□□ -0.29
CHGA-205ENST00000556098 RAI14Q9P0K7 980 aa13.27□□□□□ -0.29
CHGA-205ENST00000556098 PFASO15067 1338 aa13.27□□□□□ -0.29
CHGA-205ENST00000556098 ZNFX1Q9P2E3 1918 aaKnown RBP13.27□□□□□ -0.29
CHGA-205ENST00000556098 USP17L5A8MUK1 530 aa13.26□□□□□ -0.29
CHGA-205ENST00000556098 ATP5JP18859 108 aa13.26□□□□□ -0.29
CHGA-205ENST00000556098 RLFQ13129 1914 aa13.26□□□□□ -0.29
CHGA-205ENST00000556098 GORABQ5T7V8 394 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms