RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 MPHOSPH10O00566 681 aaKnown RBP9.04□□□□□ -0.96
TDP1-214ENST00000556063 ORC4O43929 436 aa9.04□□□□□ -0.96
TDP1-214ENST00000556063 INPP5BP32019 993 aa9.04□□□□□ -0.96
TDP1-214ENST00000556063 SHMT1P34896 483 aa9.04□□□□□ -0.96
TDP1-214ENST00000556063 CTDSPL2Q05D32 466 aa9.04□□□□□ -0.96
TDP1-214ENST00000556063 KRT32Q14532 448 aa9.04□□□□□ -0.96
TDP1-214ENST00000556063 ABCB5Q2M3G0 1257 aa9.04□□□□□ -0.96
TDP1-214ENST00000556063 NOL9Q5SY16 702 aaKnown RBP9.04□□□□□ -0.96
TDP1-214ENST00000556063 RALYLQ86SE5 291 aaKnown RBP9.04□□□□□ -0.96
TDP1-214ENST00000556063 SAPCD2Q86UD0 394 aa9.04□□□□□ -0.96
TDP1-214ENST00000556063 ERO1BQ86YB8 467 aa9.04□□□□□ -0.96
TDP1-214ENST00000556063 SCYL3Q8IZE3 742 aa9.04□□□□□ -0.96
TDP1-214ENST00000556063 STK11IPQ8N1F8 1099 aa9.04□□□□□ -0.96
TDP1-214ENST00000556063 SLC44A5Q8NCS7 719 aa9.04□□□□□ -0.96
TDP1-214ENST00000556063 STAG1Q8WVM7 1258 aa9.04□□□□□ -0.96
TDP1-214ENST00000556063 ESR2Q92731 530 aa9.04□□□□□ -0.96
TDP1-214ENST00000556063 CCDC102AQ96A19 550 aa9.04□□□□□ -0.96
TDP1-214ENST00000556063 TBC1D2Q9BYX2 928 aa9.04□□□□□ -0.96
TDP1-214ENST00000556063 KRT23Q9C075 422 aa9.04□□□□□ -0.96
TDP1-214ENST00000556063 TSPY2A6NKD2 308 aa9.03□□□□□ -0.96
TDP1-214ENST00000556063 SLC27A2O14975 620 aa9.03□□□□□ -0.96
TDP1-214ENST00000556063 RANBP6O60518 1105 aaKnown RBP9.03□□□□□ -0.96
TDP1-214ENST00000556063 FGRP09769 529 aa9.03□□□□□ -0.96
TDP1-214ENST00000556063 TSPY3P0CV98 308 aa9.03□□□□□ -0.96
TDP1-214ENST00000556063 TSPY8P0CW00 308 aa9.03□□□□□ -0.96
TDP1-214ENST00000556063 HSPA6P17066 643 aa9.03□□□□□ -0.96
TDP1-214ENST00000556063 ECE1P42892 770 aa9.03□□□□□ -0.96
TDP1-214ENST00000556063 ZNF157P51786 506 aaPredicted RBP9.03□□□□□ -0.96
TDP1-214ENST00000556063 VGLL4Q14135 290 aa9.03□□□□□ -0.96
TDP1-214ENST00000556063 NECTIN1Q15223 517 aa9.03□□□□□ -0.96
TDP1-214ENST00000556063 CCDC178Q5BJE1 867 aa9.03□□□□□ -0.96
TDP1-214ENST00000556063 RRP12Q5JTH9 1297 aaKnown RBP9.03□□□□□ -0.96
TDP1-214ENST00000556063 CREB3L3Q68CJ9 461 aa9.03□□□□□ -0.96
TDP1-214ENST00000556063 RGMBQ6NW40 437 aa9.03□□□□□ -0.96
TDP1-214ENST00000556063 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.03□□□□□ -0.96
TDP1-214ENST00000556063 TMEM179Q6ZVK1 233 aa9.03□□□□□ -0.96
TDP1-214ENST00000556063 PAXIP1Q6ZW49 1069 aaPredicted RBP9.03□□□□□ -0.96
TDP1-214ENST00000556063 MOB2Q70IA6 237 aa9.03□□□□□ -0.96
TDP1-214ENST00000556063 DNAJC18Q9H819 358 aa9.03□□□□□ -0.96
TDP1-214ENST00000556063 AS3MTQ9HBK9 375 aa9.03□□□□□ -0.96
TDP1-214ENST00000556063 PLSCR2Q9NRY7 297 aa9.03□□□□□ -0.96
TDP1-214ENST00000556063 ZBTB21Q9ULJ3 1066 aa9.03□□□□□ -0.96
TDP1-214ENST00000556063 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.03□□□□□ -0.96
TDP1-214ENST00000556063 SIPA1L1O43166 1804 aa9.03□□□□□ -0.96
TDP1-214ENST00000556063 LAMA4Q16363 1823 aa9.03□□□□□ -0.96
TDP1-214ENST00000556063 SPDYE5A6NIY4 337 aa9.02□□□□□ -0.97
TDP1-214ENST00000556063 USP17L5A8MUK1 530 aa9.02□□□□□ -0.97
TDP1-214ENST00000556063 PRDM1O75626 825 aa9.02□□□□□ -0.97
TDP1-214ENST00000556063 GDF11O95390 407 aa9.02□□□□□ -0.97
TDP1-214ENST00000556063 GH2P01242 217 aa9.02□□□□□ -0.97
TDP1-214ENST00000556063 CYP21A2P08686 494 aa9.02□□□□□ -0.97
TDP1-214ENST00000556063 RASA1P20936 1047 aa9.02□□□□□ -0.97
TDP1-214ENST00000556063 HSPA4P34932 840 aa9.02□□□□□ -0.97
TDP1-214ENST00000556063 TFAP4Q01664 338 aa9.02□□□□□ -0.97
TDP1-214ENST00000556063 PPATQ06203 517 aa9.02□□□□□ -0.97
TDP1-214ENST00000556063 DEFB115Q30KQ5 88 aa9.02□□□□□ -0.97
TDP1-214ENST00000556063 C8orf34Q49A92 452 aa9.02□□□□□ -0.97
TDP1-214ENST00000556063 IQCA1Q86XH1 822 aa9.02□□□□□ -0.97
TDP1-214ENST00000556063 NEDD1Q8NHV4 660 aa9.02□□□□□ -0.97
TDP1-214ENST00000556063 NCOA7Q8NI08 942 aa9.02□□□□□ -0.97
TDP1-214ENST00000556063 ZKSCAN4Q969J2 545 aaPredicted RBP9.02□□□□□ -0.97
TDP1-214ENST00000556063 USP26Q9BXU7 913 aa9.02□□□□□ -0.97
TDP1-214ENST00000556063 SH2D4AQ9H788 454 aa9.02□□□□□ -0.97
TDP1-214ENST00000556063 KANSL2Q9H9L4 492 aa9.02□□□□□ -0.97
TDP1-214ENST00000556063 ELP3Q9H9T3 547 aa9.02□□□□□ -0.97
TDP1-214ENST00000556063 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.02□□□□□ -0.97
TDP1-214ENST00000556063 FZD1Q9UP38 647 aa9.02□□□□□ -0.97
TDP1-214ENST00000556063 RASSF10A6NK89 507 aa9.01□□□□□ -0.97
TDP1-214ENST00000556063 E7EWF7 191 aa9.01□□□□□ -0.97
TDP1-214ENST00000556063 SMIM22K7EJ46 135 aa9.01□□□□□ -0.97
TDP1-214ENST00000556063 HMGB1P09429 215 aaKnown RBP9.01□□□□□ -0.97
TDP1-214ENST00000556063 SLURP2P0DP57 97 aa9.01□□□□□ -0.97
TDP1-214ENST00000556063 ZBTB48P10074 688 aaPredicted RBP9.01□□□□□ -0.97
TDP1-214ENST00000556063 AKR1B1P15121 316 aa9.01□□□□□ -0.97
TDP1-214ENST00000556063 PTPRAP18433 802 aa9.01□□□□□ -0.97
TDP1-214ENST00000556063 PSMA5P28066 241 aa9.01□□□□□ -0.97
TDP1-214ENST00000556063 EVX2Q03828 476 aa9.01□□□□□ -0.97
TDP1-214ENST00000556063 PPIL2Q13356 520 aa9.01□□□□□ -0.97
TDP1-214ENST00000556063 DOCK1Q14185 1865 aa9.01□□□□□ -0.97
TDP1-214ENST00000556063 SART3Q15020 963 aaKnown RBP9.01□□□□□ -0.97
TDP1-214ENST00000556063 RAB3GAP1Q15042 981 aa9.01□□□□□ -0.97
TDP1-214ENST00000556063 TSGA10IPQ3SY00 556 aa9.01□□□□□ -0.97
TDP1-214ENST00000556063 TBC1D10CQ8IV04 446 aa9.01□□□□□ -0.97
TDP1-214ENST00000556063 OPTNQ96CV9 577 aa9.01□□□□□ -0.97
TDP1-214ENST00000556063 CLMNQ96JQ2 1002 aa9.01□□□□□ -0.97
TDP1-214ENST00000556063 FEZ1Q99689 392 aa9.01□□□□□ -0.97
TDP1-214ENST00000556063 UBAC1Q9BSL1 405 aa9.01□□□□□ -0.97
TDP1-214ENST00000556063 ARHGEF10LQ9HCE6 1279 aa9.01□□□□□ -0.97
TDP1-214ENST00000556063 SNCAIPQ9Y6H5 919 aa9.01□□□□□ -0.97
TDP1-214ENST00000556063 ZHX2Q9Y6X8 837 aa9.01□□□□□ -0.97
TDP1-214ENST00000556063 ERICH2A1L162 156 aa9□□□□□ -0.97
TDP1-214ENST00000556063 B4E1Z4 1266 aa9□□□□□ -0.97
TDP1-214ENST00000556063 C19orf81C9J6K1 198 aa9□□□□□ -0.97
TDP1-214ENST00000556063 CXCL11O14625 94 aa9□□□□□ -0.97
TDP1-214ENST00000556063 KDM4AO75164 1064 aa9□□□□□ -0.97
TDP1-214ENST00000556063 MCM5P33992 734 aa9□□□□□ -0.97
TDP1-214ENST00000556063 ANAPC15P60006 121 aa9□□□□□ -0.97
TDP1-214ENST00000556063 ICA1Q05084 483 aa9□□□□□ -0.97
TDP1-214ENST00000556063 NOGQ13253 232 aa9□□□□□ -0.97
TDP1-214ENST00000556063 SNAPC2Q13487 334 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms