RNA–Protein interactions for RNA: ENST00000555837.5

CDKN3-208, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2

Gene CDKN3, Length 689 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-208ENST00000555837 SBK1Q52WX2 424 aa27.37■■□□□ 1.97
CDKN3-208ENST00000555837 C12orf60Q5U649 245 aa27.37■■□□□ 1.97
CDKN3-208ENST00000555837 CENPQQ7L2Z9 268 aaPredicted RBP27.37■■□□□ 1.97
CDKN3-208ENST00000555837 PRRT2Q7Z6L0 340 aaPredicted RBP27.37■■□□□ 1.97
CDKN3-208ENST00000555837 CCDC17Q96LX7 622 aa27.37■■□□□ 1.97
CDKN3-208ENST00000555837 USP17L12C9JPN9 530 aa27.36■■□□□ 1.97
CDKN3-208ENST00000555837 USP17L21D6R901 530 aa27.36■■□□□ 1.97
CDKN3-208ENST00000555837 GPR25O00155 361 aa27.36■■□□□ 1.97
CDKN3-208ENST00000555837 PRKAB2O43741 272 aa27.36■■□□□ 1.97
CDKN3-208ENST00000555837 FKTNO75072 461 aa27.36■■□□□ 1.97
CDKN3-208ENST00000555837 TDO2P48775 406 aa27.36■■□□□ 1.97
CDKN3-208ENST00000555837 ABCB5Q2M3G0 1257 aa27.36■■□□□ 1.97
CDKN3-208ENST00000555837 SLFNL1Q499Z3 407 aa27.36■■□□□ 1.97
CDKN3-208ENST00000555837 PROCA1Q8NCQ7 364 aaPredicted RBP27.36■■□□□ 1.97
CDKN3-208ENST00000555837 PTPN18Q99952 460 aa27.36■■□□□ 1.97
CDKN3-208ENST00000555837 DNAJC18Q9H819 358 aa27.36■■□□□ 1.97
CDKN3-208ENST00000555837 ZBTB21Q9ULJ3 1066 aa27.36■■□□□ 1.97
CDKN3-208ENST00000555837 TRIM75PA6NK02 468 aa27.35■■□□□ 1.97
CDKN3-208ENST00000555837 GABPAQ06546 454 aa27.35■■□□□ 1.97
CDKN3-208ENST00000555837 TNS4Q8IZW8 715 aa27.35■■□□□ 1.97
CDKN3-208ENST00000555837 PARK7Q99497 189 aaKnown RBP27.35■■□□□ 1.97
CDKN3-208ENST00000555837 TMOD4Q9NZQ9 345 aa27.35■■□□□ 1.97
CDKN3-208ENST00000555837 PNMA3Q9UL41 463 aa27.35■■□□□ 1.97
CDKN3-208ENST00000555837 BTBD19C9JJ37 291 aa27.34■■□□□ 1.97
CDKN3-208ENST00000555837 SPP2Q13103 211 aa27.34■■□□□ 1.97
CDKN3-208ENST00000555837 MCMDC2Q4G0Z9 681 aa27.34■■□□□ 1.97
CDKN3-208ENST00000555837 COL13A1Q5TAT6 717 aaPredicted RBP27.34■■□□□ 1.97
CDKN3-208ENST00000555837 NAPBQ9H115 298 aa27.34■■□□□ 1.97
CDKN3-208ENST00000555837 GSG1L2A8MUP6 293 aa27.33■■□□□ 1.97
CDKN3-208ENST00000555837 USP17L10C9JJH3 530 aa27.33■■□□□ 1.97
CDKN3-208ENST00000555837 CRHR2Q13324 411 aa27.33■■□□□ 1.97
CDKN3-208ENST00000555837 CTR9Q6PD62 1173 aa27.33■■□□□ 1.97
CDKN3-208ENST00000555837 GADL1Q6ZQY3 521 aa27.33■■□□□ 1.97
CDKN3-208ENST00000555837 ERO1AQ96HE7 468 aa27.33■■□□□ 1.97
CDKN3-208ENST00000555837 DIAPH3Q9NSV4 1193 aa27.33■■□□□ 1.97
CDKN3-208ENST00000555837 DDX60LQ5H9U9 1706 aaKnown RBP27.33■■□□□ 1.96
CDKN3-208ENST00000555837 M0R2C6 588 aa27.32■■□□□ 1.96
CDKN3-208ENST00000555837 PDHXO00330 501 aa27.32■■□□□ 1.96
CDKN3-208ENST00000555837 GDF11O95390 407 aa27.32■■□□□ 1.96
CDKN3-208ENST00000555837 GH2P01242 217 aa27.32■■□□□ 1.96
CDKN3-208ENST00000555837 USP14P54578 494 aa27.32■■□□□ 1.96
CDKN3-208ENST00000555837 PKN2Q16513 984 aaKnown RBP27.32■■□□□ 1.96
CDKN3-208ENST00000555837 FAM43AQ8N2R8 423 aa27.32■■□□□ 1.96
CDKN3-208ENST00000555837 SIPA1L1O43166 1804 aa27.32■■□□□ 1.96
CDKN3-208ENST00000555837 CHGBP05060 677 aa27.31■■□□□ 1.96
CDKN3-208ENST00000555837 SLURP2P0DP57 97 aa27.31■■□□□ 1.96
CDKN3-208ENST00000555837 SHMT1P34896 483 aa27.31■■□□□ 1.96
CDKN3-208ENST00000555837 BACE1P56817 501 aa27.31■■□□□ 1.96
CDKN3-208ENST00000555837 KIF22Q14807 665 aa27.31■■□□□ 1.96
CDKN3-208ENST00000555837 TMEM179Q6ZVK1 233 aa27.31■■□□□ 1.96
CDKN3-208ENST00000555837 C16orf86Q6ZW13 317 aa27.31■■□□□ 1.96
CDKN3-208ENST00000555837 IFNL3Q8IZI9 196 aa27.31■■□□□ 1.96
CDKN3-208ENST00000555837 SH2D4AQ9H788 454 aa27.31■■□□□ 1.96
CDKN3-208ENST00000555837 AGTPBP1Q9UPW5 1226 aa27.31■■□□□ 1.96
CDKN3-208ENST00000555837 ATAD5Q96QE3 1844 aa27.31■■□□□ 1.96
CDKN3-208ENST00000555837 MPHOSPH10O00566 681 aaKnown RBP27.3■■□□□ 1.96
CDKN3-208ENST00000555837 TLR2O60603 784 aa27.3■■□□□ 1.96
CDKN3-208ENST00000555837 SDSP20132 328 aa27.3■■□□□ 1.96
CDKN3-208ENST00000555837 RAB3GAP1Q15042 981 aa27.3■■□□□ 1.96
CDKN3-208ENST00000555837 SH3D19Q5HYK7 790 aa27.3■■□□□ 1.96
CDKN3-208ENST00000555837 ZNF296Q8WUU4 475 aaPredicted RBP27.3■■□□□ 1.96
CDKN3-208ENST00000555837 CCDC136Q96JN2 1154 aa27.3■■□□□ 1.96
CDKN3-208ENST00000555837 MKNK2Q9HBH9 465 aa27.3■■□□□ 1.96
CDKN3-208ENST00000555837 MINDY4BA8MYZ0 360 aa27.29■■□□□ 1.96
CDKN3-208ENST00000555837 SP3Q02447 781 aa27.29■■□□□ 1.96
CDKN3-208ENST00000555837 PDE4BQ07343 736 aa27.29■■□□□ 1.96
CDKN3-208ENST00000555837 ERICH6BQ5W0A0 696 aa27.29■■□□□ 1.96
CDKN3-208ENST00000555837 FEZ1Q99689 392 aa27.29■■□□□ 1.96
CDKN3-208ENST00000555837 OSBPP22059 807 aa27.28■■□□□ 1.96
CDKN3-208ENST00000555837 CDK8P49336 464 aa27.28■■□□□ 1.96
CDKN3-208ENST00000555837 RRP1BQ14684 758 aaKnown RBP27.28■■□□□ 1.96
CDKN3-208ENST00000555837 USP17L2Q6R6M4 530 aa27.28■■□□□ 1.96
CDKN3-208ENST00000555837 CTU1Q7Z7A3 348 aaKnown RBP27.28■■□□□ 1.96
CDKN3-208ENST00000555837 TTC22Q5TAA0 569 aa27.27■■□□□ 1.96
CDKN3-208ENST00000555837 SMCR8Q8TEV9 937 aaPredicted RBP27.27■■□□□ 1.96
CDKN3-208ENST00000555837 RUFY2Q8WXA3 655 aa27.27■■□□□ 1.96
CDKN3-208ENST00000555837 SEC62Q99442 399 aaKnown RBP27.27■■□□□ 1.96
CDKN3-208ENST00000555837 ARHGEF10LQ9HCE6 1279 aa27.27■■□□□ 1.96
CDKN3-208ENST00000555837 CYP2D6P10635 497 aa27.26■■□□□ 1.95
CDKN3-208ENST00000555837 HMGCS2P54868 508 aa27.26■■□□□ 1.95
CDKN3-208ENST00000555837 MTMR2Q13614 643 aa27.26■■□□□ 1.95
CDKN3-208ENST00000555837 PPP4R3BQ5MIZ7 849 aa27.26■■□□□ 1.95
CDKN3-208ENST00000555837 ZNF444Q8N0Y2 327 aaPredicted RBP27.26■■□□□ 1.95
CDKN3-208ENST00000555837 BAZ2AQ9UIF9 1905 aaKnown RBP27.26■■□□□ 1.95
CDKN3-208ENST00000555837 ROBO3Q96MS0 1386 aa27.25■■□□□ 1.95
CDKN3-208ENST00000555837 MOGSQ13724 837 aa27.25■■□□□ 1.95
CDKN3-208ENST00000555837 ALX1Q15699 326 aa27.25■■□□□ 1.95
CDKN3-208ENST00000555837 GPAT2Q6NUI2 795 aa27.25■■□□□ 1.95
CDKN3-208ENST00000555837 DYNLL2Q96FJ2 89 aa27.25■■□□□ 1.95
CDKN3-208ENST00000555837 PHIPQ8WWQ0 1821 aa27.25■■□□□ 1.95
CDKN3-208ENST00000555837 CCDC171Q6TFL3 1326 aa27.24■■□□□ 1.95
CDKN3-208ENST00000555837 GNRH1P01148 92 aa27.24■■□□□ 1.95
CDKN3-208ENST00000555837 NMIQ13287 307 aaPredicted RBP27.24■■□□□ 1.95
CDKN3-208ENST00000555837 DGKZQ13574 1117 aa27.24■■□□□ 1.95
CDKN3-208ENST00000555837 GTF3C2Q8WUA4 911 aaPredicted RBP27.24■■□□□ 1.95
CDKN3-208ENST00000555837 KIAA1683Q9H0B3 1180 aa27.24■■□□□ 1.95
CDKN3-208ENST00000555837 KANSL2Q9H9L4 492 aa27.24■■□□□ 1.95
CDKN3-208ENST00000555837 CASP8AP2Q9UKL3 1982 aa27.24■■□□□ 1.95
CDKN3-208ENST00000555837 PDE4AP27815 886 aa27.23■■□□□ 1.95
CDKN3-208ENST00000555837 GCLCP48506 637 aaPredicted RBP27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms