RNA–Protein interactions for RNA: ENST00000555752.1

SUPT16H-203, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 888 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-203ENST00000555752 SOCS4Q8WXH5 440 aa23.43■■□□□ 1.34
SUPT16H-203ENST00000555752 USP6NLQ92738 828 aa23.43■■□□□ 1.34
SUPT16H-203ENST00000555752 HERC5Q9UII4 1024 aaKnown RBP23.43■■□□□ 1.34
SUPT16H-203ENST00000555752 AKAP2Q9Y2D5 859 aa23.43■■□□□ 1.34
SUPT16H-203ENST00000555752 GUCD1Q96NT3 240 aa23.42■■□□□ 1.34
SUPT16H-203ENST00000555752 PI4KBQ9UBF8 816 aa23.42■■□□□ 1.34
SUPT16H-203ENST00000555752 LAMA2P24043 3122 aaKnown RBP23.41■■□□□ 1.34
SUPT16H-203ENST00000555752 SRGAP3O43295 1099 aa23.41■■□□□ 1.34
SUPT16H-203ENST00000555752 GDF11O95390 407 aa23.41■■□□□ 1.34
SUPT16H-203ENST00000555752 MAP4K4O95819 1239 aaPredicted RBP23.41■■□□□ 1.34
SUPT16H-203ENST00000555752 PDE3AQ14432 1141 aa23.41■■□□□ 1.34
SUPT16H-203ENST00000555752 FAM161BQ96MY7 647 aa23.41■■□□□ 1.34
SUPT16H-203ENST00000555752 PAGR1Q9BTK6 254 aa23.41■■□□□ 1.34
SUPT16H-203ENST00000555752 FRMPD3Q5JV73 1810 aa23.4■■□□□ 1.34
SUPT16H-203ENST00000555752 ASNSP08243 561 aa23.4■■□□□ 1.34
SUPT16H-203ENST00000555752 MAPK4P31152 587 aa23.4■■□□□ 1.34
SUPT16H-203ENST00000555752 MCAMP43121 646 aa23.4■■□□□ 1.34
SUPT16H-203ENST00000555752 ERVK-9P63128 1117 aa23.4■■□□□ 1.34
SUPT16H-203ENST00000555752 ERVK-24P63145 666 aa23.4■■□□□ 1.34
SUPT16H-203ENST00000555752 MORN1Q5T089 497 aa23.4■■□□□ 1.34
SUPT16H-203ENST00000555752 GPR142Q7Z601 462 aa23.4■■□□□ 1.34
SUPT16H-203ENST00000555752 MAPKAPK5Q8IW41 473 aa23.4■■□□□ 1.34
SUPT16H-203ENST00000555752 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.4■■□□□ 1.34
SUPT16H-203ENST00000555752 AATFQ9NY61 560 aaKnown RBP eCLIP23.4■■□□□ 1.34
SUPT16H-203ENST00000555752 CDK5RAP2Q96SN8 1893 aa23.39■■□□□ 1.34
SUPT16H-203ENST00000555752 ARID4AP29374 1257 aaPredicted RBP23.39■■□□□ 1.33
SUPT16H-203ENST00000555752 GORABQ5T7V8 394 aa23.39■■□□□ 1.33
SUPT16H-203ENST00000555752 LRP2BPQ9P2M1 347 aa23.39■■□□□ 1.33
SUPT16H-203ENST00000555752 NDUFB9Q9Y6M9 179 aa23.39■■□□□ 1.33
SUPT16H-203ENST00000555752 DNAH12Q6ZR08 3092 aa23.39■■□□□ 1.33
SUPT16H-203ENST00000555752 EYSQ5T1H1 3165 aa23.38■■□□□ 1.33
SUPT16H-203ENST00000555752 USP17L10C9JJH3 530 aa23.38■■□□□ 1.33
SUPT16H-203ENST00000555752 POTEB2H3BUK9 544 aa23.38■■□□□ 1.33
SUPT16H-203ENST00000555752 RGS2P41220 211 aa23.38■■□□□ 1.33
SUPT16H-203ENST00000555752 PLEKHH3Q7Z736 793 aa23.38■■□□□ 1.33
SUPT16H-203ENST00000555752 ADGRA1Q86SQ6 560 aa23.38■■□□□ 1.33
SUPT16H-203ENST00000555752 TRMT44Q8IYL2 757 aaKnown RBP23.38■■□□□ 1.33
SUPT16H-203ENST00000555752 TGFBRAP1Q8WUH2 860 aa23.38■■□□□ 1.33
SUPT16H-203ENST00000555752 APBA2Q99767 749 aa23.38■■□□□ 1.33
SUPT16H-203ENST00000555752 EMILIN3Q9NT22 766 aa23.38■■□□□ 1.33
SUPT16H-203ENST00000555752 PALD1Q9ULE6 856 aa23.38■■□□□ 1.33
SUPT16H-203ENST00000555752 HDAC5Q9UQL6 1122 aa23.38■■□□□ 1.33
SUPT16H-203ENST00000555752 C19orf81C9J6K1 198 aa23.37■■□□□ 1.33
SUPT16H-203ENST00000555752 CCAR1Q8IX12 1150 aaKnown RBP23.37■■□□□ 1.33
SUPT16H-203ENST00000555752 API5Q9BZZ5 524 aaKnown RBP23.37■■□□□ 1.33
SUPT16H-203ENST00000555752 DHX36Q9H2U1 1008 aaKnown RBP23.37■■□□□ 1.33
SUPT16H-203ENST00000555752 SNRKQ9NRH2 765 aa23.37■■□□□ 1.33
SUPT16H-203ENST00000555752 FLRT1Q9NZU1 646 aa23.37■■□□□ 1.33
SUPT16H-203ENST00000555752 ZBTB21Q9ULJ3 1066 aa23.37■■□□□ 1.33
SUPT16H-203ENST00000555752 MAST2Q6P0Q8 1798 aa23.37■■□□□ 1.33
SUPT16H-203ENST00000555752 VCANP13611 3396 aa23.37■■□□□ 1.33
SUPT16H-203ENST00000555752 FLT1P17948 1338 aa23.36■■□□□ 1.33
SUPT16H-203ENST00000555752 SENP6Q9GZR1 1112 aaPredicted RBP23.36■■□□□ 1.33
SUPT16H-203ENST00000555752 SAP30BPQ9UHR5 308 aaKnown RBP23.36■■□□□ 1.33
SUPT16H-203ENST00000555752 CNMDO75829 334 aa23.35■■□□□ 1.33
SUPT16H-203ENST00000555752 ZYXQ15942 572 aaKnown RBP23.35■■□□□ 1.33
SUPT16H-203ENST00000555752 NAA16Q6N069 864 aaPredicted RBP23.35■■□□□ 1.33
SUPT16H-203ENST00000555752 METTL16Q86W50 562 aaKnown RBP23.35■■□□□ 1.33
SUPT16H-203ENST00000555752 CRACR2BQ8N4Y2 399 aaPredicted RBP23.35■■□□□ 1.33
SUPT16H-203ENST00000555752 NOL10Q9BSC4 688 aaKnown RBP23.35■■□□□ 1.33
SUPT16H-203ENST00000555752 FOCADQ5VW36 1801 aa23.35■■□□□ 1.33
SUPT16H-203ENST00000555752 ATN1P54259 1190 aaPredicted RBP23.34■■□□□ 1.33
SUPT16H-203ENST00000555752 MAP2K5Q13163 448 aa23.34■■□□□ 1.33
SUPT16H-203ENST00000555752 MTX1Q13505 466 aa23.34■■□□□ 1.33
SUPT16H-203ENST00000555752 MYO5AQ9Y4I1 1855 aaKnown RBP23.34■■□□□ 1.33
SUPT16H-203ENST00000555752 FAM109BQ6ICB4 259 aaPredicted RBP23.33■■□□□ 1.33
SUPT16H-203ENST00000555752 FOXP4Q8IVH2 680 aaPredicted RBP23.33■■□□□ 1.33
SUPT16H-203ENST00000555752 TRIM34Q9BYJ4 488 aa23.33■■□□□ 1.33
SUPT16H-203ENST00000555752 BAG3O95817 575 aa23.32■■□□□ 1.32
SUPT16H-203ENST00000555752 USP17L2Q6R6M4 530 aa23.32■■□□□ 1.32
SUPT16H-203ENST00000555752 TRMT2AQ8IZ69 625 aaKnown RBP23.32■■□□□ 1.32
SUPT16H-203ENST00000555752 EDC3Q96F86 508 aaKnown RBP23.32■■□□□ 1.32
SUPT16H-203ENST00000555752 LBHD1Q9BQE6 289 aaPredicted RBP23.32■■□□□ 1.32
SUPT16H-203ENST00000555752 CWC22Q9HCG8 908 aaKnown RBP23.32■■□□□ 1.32
SUPT16H-203ENST00000555752 LTBP2Q14767 1821 aa23.31■■□□□ 1.32
SUPT16H-203ENST00000555752 PNMA6EA0A0J9YXQ4 647 aa23.31■■□□□ 1.32
SUPT16H-203ENST00000555752 GH2P01242 217 aa23.31■■□□□ 1.32
SUPT16H-203ENST00000555752 UQCRFS1P1P0C7P4 283 aa23.31■■□□□ 1.32
SUPT16H-203ENST00000555752 CNGA1P29973 690 aa23.31■■□□□ 1.32
SUPT16H-203ENST00000555752 PPP4CP60510 307 aa23.31■■□□□ 1.32
SUPT16H-203ENST00000555752 WDR78Q5VTH9 848 aa23.31■■□□□ 1.32
SUPT16H-203ENST00000555752 GNAI3P08754 354 aa23.3■■□□□ 1.32
SUPT16H-203ENST00000555752 DYNLL1P63167 89 aaKnown RBP23.3■■□□□ 1.32
SUPT16H-203ENST00000555752 TRPV1Q8NER1 839 aa23.3■■□□□ 1.32
SUPT16H-203ENST00000555752 GTF3C2Q8WUA4 911 aaPredicted RBP23.3■■□□□ 1.32
SUPT16H-203ENST00000555752 DDX20Q9UHI6 824 aaKnown RBP23.3■■□□□ 1.32
SUPT16H-203ENST00000555752 CYP2E1P05181 493 aaPredicted RBP23.29■■□□□ 1.32
SUPT16H-203ENST00000555752 PLCG2P16885 1265 aa23.29■■□□□ 1.32
SUPT16H-203ENST00000555752 CYP2C19P33261 490 aa23.29■■□□□ 1.32
SUPT16H-203ENST00000555752 MFSD14CQ5VZR4 134 aa23.29■■□□□ 1.32
SUPT16H-203ENST00000555752 NPLOC4Q8TAT6 608 aa23.29■■□□□ 1.32
SUPT16H-203ENST00000555752 GINM1Q9NU53 330 aa23.29■■□□□ 1.32
SUPT16H-203ENST00000555752 RABGAP1Q9Y3P9 1069 aa23.29■■□□□ 1.32
SUPT16H-203ENST00000555752 PTPREP23469 700 aa23.28■■□□□ 1.32
SUPT16H-203ENST00000555752 RTP1P59025 263 aa23.28■■□□□ 1.32
SUPT16H-203ENST00000555752 G3BP1Q13283 466 aaKnown RBP eCLIP23.28■■□□□ 1.32
SUPT16H-203ENST00000555752 ZNF697Q5TEC3 545 aa23.28■■□□□ 1.32
SUPT16H-203ENST00000555752 DBNDD2Q9BQY9 259 aa23.28■■□□□ 1.32
SUPT16H-203ENST00000555752 PIH1D3Q9NQM4 214 aaKnown RBP23.28■■□□□ 1.32
SUPT16H-203ENST00000555752 BTBD7Q9P203 1132 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms