RNA–Protein interactions for RNA: ENST00000555537.1

NEK9-206, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-206ENST00000555537 SOCS4Q8WXH5 440 aa10.38□□□□□ -0.75
NEK9-206ENST00000555537 MYLIPQ8WY64 445 aa10.38□□□□□ -0.75
NEK9-206ENST00000555537 NSUN4Q96CB9 384 aaKnown RBP10.38□□□□□ -0.75
NEK9-206ENST00000555537 EDC3Q96F86 508 aaKnown RBP10.38□□□□□ -0.75
NEK9-206ENST00000555537 NEUROD6Q96NK8 337 aa10.38□□□□□ -0.75
NEK9-206ENST00000555537 WDR18Q9BV38 432 aa10.38□□□□□ -0.75
NEK9-206ENST00000555537 TBC1D2Q9BYX2 928 aa10.38□□□□□ -0.75
NEK9-206ENST00000555537 FBXO3Q9UK99 471 aa10.38□□□□□ -0.75
NEK9-206ENST00000555537 LAMA2P24043 3122 aaKnown RBP10.38□□□□□ -0.75
NEK9-206ENST00000555537 ATAD5Q96QE3 1844 aa10.37□□□□□ -0.75
NEK9-206ENST00000555537 USP17L10C9JJH3 530 aa10.37□□□□□ -0.75
NEK9-206ENST00000555537 GDF11O95390 407 aa10.37□□□□□ -0.75
NEK9-206ENST00000555537 LDHCP07864 332 aa10.37□□□□□ -0.75
NEK9-206ENST00000555537 UBTFL1P0CB47 393 aaPredicted RBP10.37□□□□□ -0.75
NEK9-206ENST00000555537 RTP1P59025 263 aa10.37□□□□□ -0.75
NEK9-206ENST00000555537 TFCP2Q12800 502 aa10.37□□□□□ -0.75
NEK9-206ENST00000555537 TEX11Q8IYF3 940 aa10.37□□□□□ -0.75
NEK9-206ENST00000555537 TRMT44Q8IYL2 757 aaKnown RBP10.37□□□□□ -0.75
NEK9-206ENST00000555537 EMILIN3Q9NT22 766 aa10.37□□□□□ -0.75
NEK9-206ENST00000555537 RAI14Q9P0K7 980 aa10.37□□□□□ -0.75
NEK9-206ENST00000555537 HMG20BQ9P0W2 317 aa10.37□□□□□ -0.75
NEK9-206ENST00000555537 PI4KBQ9UBF8 816 aa10.37□□□□□ -0.75
NEK9-206ENST00000555537 ATP11BQ9Y2G3 1177 aa10.37□□□□□ -0.75
NEK9-206ENST00000555537 DNAH12Q6ZR08 3092 aa10.37□□□□□ -0.75
NEK9-206ENST00000555537 COL2A1P02458 1487 aaPredicted RBP10.36□□□□□ -0.75
NEK9-206ENST00000555537 C19orf81C9J6K1 198 aa10.36□□□□□ -0.75
NEK9-206ENST00000555537 CNMDO75829 334 aa10.36□□□□□ -0.75
NEK9-206ENST00000555537 MAP2K5Q13163 448 aa10.36□□□□□ -0.75
NEK9-206ENST00000555537 GJC2Q5T442 439 aaPredicted RBP10.36□□□□□ -0.75
NEK9-206ENST00000555537 WDR78Q5VTH9 848 aa10.36□□□□□ -0.75
NEK9-206ENST00000555537 ANO1Q5XXA6 986 aa10.36□□□□□ -0.75
NEK9-206ENST00000555537 NPLOC4Q8TAT6 608 aa10.36□□□□□ -0.75
NEK9-206ENST00000555537 BADQ92934 168 aa10.36□□□□□ -0.75
NEK9-206ENST00000555537 APBA2Q99767 749 aa10.36□□□□□ -0.75
NEK9-206ENST00000555537 TTYH1Q9H313 450 aaPredicted RBP10.36□□□□□ -0.75
NEK9-206ENST00000555537 DNAJC18Q9H819 358 aa10.36□□□□□ -0.75
NEK9-206ENST00000555537 CWC22Q9HCG8 908 aaKnown RBP10.36□□□□□ -0.75
NEK9-206ENST00000555537 COPRSQ9NQ92 184 aa10.36□□□□□ -0.75
NEK9-206ENST00000555537 PRKAG2Q9UGJ0 569 aa10.36□□□□□ -0.75
NEK9-206ENST00000555537 DDX20Q9UHI6 824 aaKnown RBP10.36□□□□□ -0.75
NEK9-206ENST00000555537 HERC5Q9UII4 1024 aaKnown RBP10.36□□□□□ -0.75
NEK9-206ENST00000555537 SPTBN5Q9NRC6 3674 aaKnown RBP10.36□□□□□ -0.75
NEK9-206ENST00000555537 PDS5AQ29RF7 1337 aaKnown RBP10.35□□□□□ -0.75
NEK9-206ENST00000555537 CUL9Q8IWT3 2517 aa10.35□□□□□ -0.75
NEK9-206ENST00000555537 ZBTB22O15209 634 aa10.35□□□□□ -0.75
NEK9-206ENST00000555537 MYCNP04198 464 aaPredicted RBP10.35□□□□□ -0.75
NEK9-206ENST00000555537 ASNSP08243 561 aa10.35□□□□□ -0.75
NEK9-206ENST00000555537 CYP2C19P33261 490 aa10.35□□□□□ -0.75
NEK9-206ENST00000555537 GSTO1P78417 241 aa10.35□□□□□ -0.75
NEK9-206ENST00000555537 ZYXQ15942 572 aaKnown RBP10.35□□□□□ -0.75
NEK9-206ENST00000555537 MFSD14CQ5VZR4 134 aa10.35□□□□□ -0.75
NEK9-206ENST00000555537 MAPKAPK5Q8IW41 473 aa10.35□□□□□ -0.75
NEK9-206ENST00000555537 SPATA5Q8NB90 893 aa10.35□□□□□ -0.75
NEK9-206ENST00000555537 TRPV1Q8NER1 839 aa10.35□□□□□ -0.75
NEK9-206ENST00000555537 TGFBRAP1Q8WUH2 860 aa10.35□□□□□ -0.75
NEK9-206ENST00000555537 PRDM5Q9NQX1 630 aaPredicted RBP10.35□□□□□ -0.75
NEK9-206ENST00000555537 AATFQ9NY61 560 aaKnown RBP eCLIP10.35□□□□□ -0.75
NEK9-206ENST00000555537 RAPGEFL1Q9UHV5 662 aa10.35□□□□□ -0.75
NEK9-206ENST00000555537 PALD1Q9ULE6 856 aa10.35□□□□□ -0.75
NEK9-206ENST00000555537 ATP2B2Q01814 1243 aa10.34□□□□□ -0.75
NEK9-206ENST00000555537 MVPQ14764 893 aaKnown RBP10.34□□□□□ -0.75
NEK9-206ENST00000555537 GORABQ5T7V8 394 aa10.34□□□□□ -0.75
NEK9-206ENST00000555537 SLC39A5Q6ZMH5 540 aa10.34□□□□□ -0.75
NEK9-206ENST00000555537 SH3RF1Q7Z6J0 888 aa10.34□□□□□ -0.75
NEK9-206ENST00000555537 CRACR2BQ8N4Y2 399 aaPredicted RBP10.34□□□□□ -0.75
NEK9-206ENST00000555537 LPAR1Q92633 364 aa10.34□□□□□ -0.75
NEK9-206ENST00000555537 MEIS3Q99687 375 aa10.34□□□□□ -0.75
NEK9-206ENST00000555537 SNRKQ9NRH2 765 aa10.34□□□□□ -0.75
NEK9-206ENST00000555537 LRP2BPQ9P2M1 347 aa10.34□□□□□ -0.75
NEK9-206ENST00000555537 SAP30BPQ9UHR5 308 aaKnown RBP10.34□□□□□ -0.75
NEK9-206ENST00000555537 AKAP2Q9Y2D5 859 aa10.34□□□□□ -0.75
NEK9-206ENST00000555537 PRUNE2Q8WUY3 3088 aa10.33□□□□□ -0.76
NEK9-206ENST00000555537 DNM1LO00429 736 aa10.33□□□□□ -0.76
NEK9-206ENST00000555537 MAP4K4O95819 1239 aaPredicted RBP10.33□□□□□ -0.76
NEK9-206ENST00000555537 FOSL2P15408 326 aa10.33□□□□□ -0.76
NEK9-206ENST00000555537 COL9A1P20849 921 aa10.33□□□□□ -0.76
NEK9-206ENST00000555537 PTPREP23469 700 aa10.33□□□□□ -0.76
NEK9-206ENST00000555537 MCAMP43121 646 aa10.33□□□□□ -0.76
NEK9-206ENST00000555537 USP17L2Q6R6M4 530 aa10.33□□□□□ -0.76
NEK9-206ENST00000555537 ADGRA1Q86SQ6 560 aa10.33□□□□□ -0.76
NEK9-206ENST00000555537 FOXP4Q8IVH2 680 aaPredicted RBP10.33□□□□□ -0.76
NEK9-206ENST00000555537 TRIM34Q9BYJ4 488 aa10.33□□□□□ -0.76
NEK9-206ENST00000555537 DHX36Q9H2U1 1008 aaKnown RBP10.33□□□□□ -0.76
NEK9-206ENST00000555537 BTBD7Q9P203 1132 aa10.33□□□□□ -0.76
NEK9-206ENST00000555537 ZBTB21Q9ULJ3 1066 aa10.33□□□□□ -0.76
NEK9-206ENST00000555537 RABGAP1Q9Y3P9 1069 aa10.33□□□□□ -0.76
NEK9-206ENST00000555537 SIPA1L1O43166 1804 aa10.33□□□□□ -0.76
NEK9-206ENST00000555537 ZNF521Q96K83 1311 aa10.33□□□□□ -0.76
NEK9-206ENST00000555537 TRIM43BA6NCK2 446 aa10.32□□□□□ -0.76
NEK9-206ENST00000555537 SLC15A5A6NIM6 579 aa10.32□□□□□ -0.76
NEK9-206ENST00000555537 SRGAP3O43295 1099 aa10.32□□□□□ -0.76
NEK9-206ENST00000555537 GH2P01242 217 aa10.32□□□□□ -0.76
NEK9-206ENST00000555537 ITGB8P26012 769 aa10.32□□□□□ -0.76
NEK9-206ENST00000555537 TRIM60Q495X7 471 aa10.32□□□□□ -0.76
NEK9-206ENST00000555537 PRAMEF19Q5SWL8 479 aa10.32□□□□□ -0.76
NEK9-206ENST00000555537 NAA16Q6N069 864 aaPredicted RBP10.32□□□□□ -0.76
NEK9-206ENST00000555537 METTL16Q86W50 562 aaKnown RBP10.32□□□□□ -0.76
NEK9-206ENST00000555537 FERMT2Q96AC1 680 aa10.32□□□□□ -0.76
NEK9-206ENST00000555537 TRIM43Q96BQ3 446 aaPredicted RBP10.32□□□□□ -0.76
NEK9-206ENST00000555537 NOL10Q9BSC4 688 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms