RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 RASA1P20936 1047 aa16.92■□□□□ 0.3
CHD8-208ENST00000555301 MCCP23508 829 aa16.92■□□□□ 0.3
CHD8-208ENST00000555301 ABCB5Q2M3G0 1257 aa16.92■□□□□ 0.3
CHD8-208ENST00000555301 TBC1D10CQ8IV04 446 aa16.92■□□□□ 0.3
CHD8-208ENST00000555301 SLC10A4Q96EP9 437 aa16.92■□□□□ 0.3
CHD8-208ENST00000555301 USP26Q9BXU7 913 aa16.92■□□□□ 0.3
CHD8-208ENST00000555301 NBPF3Q9H094 633 aa16.92■□□□□ 0.3
CHD8-208ENST00000555301 CNNM2Q9H8M5 875 aa16.92■□□□□ 0.3
CHD8-208ENST00000555301 TOMM22Q9NS69 142 aa16.92■□□□□ 0.3
CHD8-208ENST00000555301 MYH1P12882 1939 aa16.92■□□□□ 0.3
CHD8-208ENST00000555301 MPHOSPH10O00566 681 aaKnown RBP16.91■□□□□ 0.3
CHD8-208ENST00000555301 GDF11O95390 407 aa16.91■□□□□ 0.3
CHD8-208ENST00000555301 HSPA4P34932 840 aa16.91■□□□□ 0.3
CHD8-208ENST00000555301 TRDNQ13061 729 aa16.91■□□□□ 0.3
CHD8-208ENST00000555301 RRP1BQ14684 758 aaKnown RBP16.91■□□□□ 0.3
CHD8-208ENST00000555301 RGMBQ6NW40 437 aa16.91■□□□□ 0.3
CHD8-208ENST00000555301 TMEM179Q6ZVK1 233 aa16.91■□□□□ 0.3
CHD8-208ENST00000555301 KRT23Q9C075 422 aa16.91■□□□□ 0.3
CHD8-208ENST00000555301 ZBTB21Q9ULJ3 1066 aa16.91■□□□□ 0.3
CHD8-208ENST00000555301 SNCAIPQ9Y6H5 919 aa16.91■□□□□ 0.3
CHD8-208ENST00000555301 GH2P01242 217 aa16.9■□□□□ 0.3
CHD8-208ENST00000555301 AKR1B1P15121 316 aa16.9■□□□□ 0.3
CHD8-208ENST00000555301 ZNF157P51786 506 aaPredicted RBP16.9■□□□□ 0.3
CHD8-208ENST00000555301 RRP12Q5JTH9 1297 aaKnown RBP16.9■□□□□ 0.3
CHD8-208ENST00000555301 ERO1BQ86YB8 467 aa16.9■□□□□ 0.3
CHD8-208ENST00000555301 ESR2Q92731 530 aa16.9■□□□□ 0.3
CHD8-208ENST00000555301 CLMNQ96JQ2 1002 aa16.9■□□□□ 0.3
CHD8-208ENST00000555301 TBC1D2Q9BYX2 928 aa16.9■□□□□ 0.3
CHD8-208ENST00000555301 ELP3Q9H9T3 547 aa16.9■□□□□ 0.3
CHD8-208ENST00000555301 SIPA1L1O43166 1804 aa16.89■□□□□ 0.29
CHD8-208ENST00000555301 SPDYE5A6NIY4 337 aa16.89■□□□□ 0.29
CHD8-208ENST00000555301 RASSF10A6NK89 507 aa16.89■□□□□ 0.29
CHD8-208ENST00000555301 TSPY2A6NKD2 308 aa16.89■□□□□ 0.29
CHD8-208ENST00000555301 E7EWF7 191 aa16.89■□□□□ 0.29
CHD8-208ENST00000555301 RANBP6O60518 1105 aaKnown RBP16.89■□□□□ 0.29
CHD8-208ENST00000555301 SEC24BO95487 1268 aa16.89■□□□□ 0.29
CHD8-208ENST00000555301 TSPY3P0CV98 308 aa16.89■□□□□ 0.29
CHD8-208ENST00000555301 TSPY8P0CW00 308 aa16.89■□□□□ 0.29
CHD8-208ENST00000555301 PTPRAP18433 802 aa16.89■□□□□ 0.29
CHD8-208ENST00000555301 TFAP4Q01664 338 aa16.89■□□□□ 0.29
CHD8-208ENST00000555301 PPATQ06203 517 aa16.89■□□□□ 0.29
CHD8-208ENST00000555301 KRT32Q14532 448 aa16.89■□□□□ 0.29
CHD8-208ENST00000555301 DEFB115Q30KQ5 88 aa16.89■□□□□ 0.29
CHD8-208ENST00000555301 TSGA10IPQ3SY00 556 aa16.89■□□□□ 0.29
CHD8-208ENST00000555301 KCNB2Q92953 911 aa16.89■□□□□ 0.29
CHD8-208ENST00000555301 CCDC102AQ96A19 550 aa16.89■□□□□ 0.29
CHD8-208ENST00000555301 AS3MTQ9HBK9 375 aa16.89■□□□□ 0.29
CHD8-208ENST00000555301 INCENPQ9NQS7 918 aa16.89■□□□□ 0.29
CHD8-208ENST00000555301 TACC3Q9Y6A5 838 aa16.89■□□□□ 0.29
CHD8-208ENST00000555301 BAZ2AQ9UIF9 1905 aaKnown RBP16.89■□□□□ 0.29
CHD8-208ENST00000555301 USP17L5A8MUK1 530 aa16.88■□□□□ 0.29
CHD8-208ENST00000555301 RAB3GAP1Q15042 981 aa16.88■□□□□ 0.29
CHD8-208ENST00000555301 PPP4R3BQ5MIZ7 849 aa16.88■□□□□ 0.29
CHD8-208ENST00000555301 RALYLQ86SE5 291 aaKnown RBP16.88■□□□□ 0.29
CHD8-208ENST00000555301 NEDD1Q8NHV4 660 aa16.88■□□□□ 0.29
CHD8-208ENST00000555301 NCOA7Q8NI08 942 aa16.88■□□□□ 0.29
CHD8-208ENST00000555301 OPTNQ96CV9 577 aa16.88■□□□□ 0.29
CHD8-208ENST00000555301 UPF2Q9HAU5 1272 aaKnown RBP16.88■□□□□ 0.29
CHD8-208ENST00000555301 NEDD4P46934 1319 aa16.88■□□□□ 0.29
CHD8-208ENST00000555301 TRPM7Q96QT4 1865 aa16.88■□□□□ 0.29
CHD8-208ENST00000555301 LAMB1P07942 1786 aa16.87■□□□□ 0.29
CHD8-208ENST00000555301 ZBTB48P10074 688 aaPredicted RBP16.87■□□□□ 0.29
CHD8-208ENST00000555301 JAG1P78504 1218 aa16.87■□□□□ 0.29
CHD8-208ENST00000555301 FAM47AQ5JRC9 791 aa16.87■□□□□ 0.29
CHD8-208ENST00000555301 PAXIP1Q6ZW49 1069 aaPredicted RBP16.87■□□□□ 0.29
CHD8-208ENST00000555301 OTUD5Q96G74 571 aa16.87■□□□□ 0.29
CHD8-208ENST00000555301 KANSL2Q9H9L4 492 aa16.87■□□□□ 0.29
CHD8-208ENST00000555301 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.87■□□□□ 0.29
CHD8-208ENST00000555301 TAF6LQ9Y6J9 622 aa16.87■□□□□ 0.29
CHD8-208ENST00000555301 ZHX2Q9Y6X8 837 aa16.87■□□□□ 0.29
CHD8-208ENST00000555301 PLIN4Q96Q06 1357 aa16.87■□□□□ 0.29
CHD8-208ENST00000555301 B4E1Z4 1266 aa16.86■□□□□ 0.29
CHD8-208ENST00000555301 KDM4AO75164 1064 aa16.86■□□□□ 0.29
CHD8-208ENST00000555301 SLC10A3P09131 477 aa16.86■□□□□ 0.29
CHD8-208ENST00000555301 GUCY1A2P33402 732 aa16.86■□□□□ 0.29
CHD8-208ENST00000555301 ECE1P42892 770 aa16.86■□□□□ 0.29
CHD8-208ENST00000555301 PPIL2Q13356 520 aa16.86■□□□□ 0.29
CHD8-208ENST00000555301 SEPT2Q15019 361 aa16.86■□□□□ 0.29
CHD8-208ENST00000555301 SHROOM1Q2M3G4 852 aaPredicted RBP16.86■□□□□ 0.29
CHD8-208ENST00000555301 STOX1Q6ZVD7 989 aa16.86■□□□□ 0.29
CHD8-208ENST00000555301 IQCA1Q86XH1 822 aa16.86■□□□□ 0.29
CHD8-208ENST00000555301 RASAL3Q86YV0 1011 aa16.86■□□□□ 0.29
CHD8-208ENST00000555301 RASEFQ8IZ41 740 aa16.86■□□□□ 0.29
CHD8-208ENST00000555301 WNK4Q96J92 1243 aa16.86■□□□□ 0.29
CHD8-208ENST00000555301 WDR18Q9BV38 432 aa16.86■□□□□ 0.29
CHD8-208ENST00000555301 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.86■□□□□ 0.29
CHD8-208ENST00000555301 BACH2Q9BYV9 841 aa16.86■□□□□ 0.29
CHD8-208ENST00000555301 TCP11L1Q9NUJ3 509 aa16.86■□□□□ 0.29
CHD8-208ENST00000555301 IGKV6D-41A0A0C4DH26 115 aa16.85■□□□□ 0.29
CHD8-208ENST00000555301 ANAPC15P60006 121 aa16.85■□□□□ 0.29
CHD8-208ENST00000555301 ICA1Q05084 483 aa16.85■□□□□ 0.29
CHD8-208ENST00000555301 CCDC178Q5BJE1 867 aa16.85■□□□□ 0.29
CHD8-208ENST00000555301 SPRYD7Q5W111 196 aa16.85■□□□□ 0.29
CHD8-208ENST00000555301 ZNF280CQ8ND82 737 aa16.85■□□□□ 0.29
CHD8-208ENST00000555301 ZSWIM5Q9P217 1185 aa16.85■□□□□ 0.29
CHD8-208ENST00000555301 AFG3L2Q9Y4W6 797 aa16.85■□□□□ 0.29
CHD8-208ENST00000555301 SNX14Q9Y5W7 946 aa16.85■□□□□ 0.29
CHD8-208ENST00000555301 CXCL11O14625 94 aa16.84■□□□□ 0.29
CHD8-208ENST00000555301 HMGB1P09429 215 aaKnown RBP16.84■□□□□ 0.29
CHD8-208ENST00000555301 PSMA5P28066 241 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms