RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 CAP2P40123 477 aa8.18□□□□□ -1.1
CKS1BP1-201ENST00000555221 PREPP48147 710 aa8.18□□□□□ -1.1
CKS1BP1-201ENST00000555221 USP11P51784 963 aa8.18□□□□□ -1.1
CKS1BP1-201ENST00000555221 UVSSAQ2YD98 709 aa8.18□□□□□ -1.1
CKS1BP1-201ENST00000555221 SLFN12Q8IYM2 578 aa8.18□□□□□ -1.1
CKS1BP1-201ENST00000555221 SMYD4Q8IYR2 804 aaPredicted RBP8.18□□□□□ -1.1
CKS1BP1-201ENST00000555221 WFDC12Q8WWY7 111 aa8.18□□□□□ -1.1
CKS1BP1-201ENST00000555221 ISL2Q96A47 359 aa8.18□□□□□ -1.1
CKS1BP1-201ENST00000555221 TJP2Q9UDY2 1190 aa8.18□□□□□ -1.1
CKS1BP1-201ENST00000555221 TNFRSF10CO14798 259 aa8.17□□□□□ -1.1
CKS1BP1-201ENST00000555221 DNAJA2O60884 412 aa8.17□□□□□ -1.1
CKS1BP1-201ENST00000555221 RAG1P15918 1043 aa8.17□□□□□ -1.1
CKS1BP1-201ENST00000555221 NOS3P29474 1203 aa8.17□□□□□ -1.1
CKS1BP1-201ENST00000555221 ADGRE1Q14246 886 aa8.17□□□□□ -1.1
CKS1BP1-201ENST00000555221 FXNQ16595 210 aa8.17□□□□□ -1.1
CKS1BP1-201ENST00000555221 ARSHQ5FYA8 562 aa8.17□□□□□ -1.1
CKS1BP1-201ENST00000555221 RUFY4Q6ZNE9 571 aa8.17□□□□□ -1.1
CKS1BP1-201ENST00000555221 TTC6Q86TZ1 520 aa8.17□□□□□ -1.1
CKS1BP1-201ENST00000555221 PCOLCE2Q9UKZ9 415 aa8.17□□□□□ -1.1
CKS1BP1-201ENST00000555221 A0A1W2PQH9 124 aa8.16□□□□□ -1.1
CKS1BP1-201ENST00000555221 CHURC1-FNTBB4DL54 471 aa8.16□□□□□ -1.1
CKS1BP1-201ENST00000555221 K7ELQ4 463 aaPredicted RBP8.16□□□□□ -1.1
CKS1BP1-201ENST00000555221 RNF225M0QZC1 329 aaPredicted RBP8.16□□□□□ -1.1
CKS1BP1-201ENST00000555221 CCNFP41002 786 aa8.16□□□□□ -1.1
CKS1BP1-201ENST00000555221 IREB2P48200 963 aaKnown RBP8.16□□□□□ -1.1
CKS1BP1-201ENST00000555221 BMS1Q14692 1282 aaKnown RBP8.16□□□□□ -1.1
CKS1BP1-201ENST00000555221 MBTPS1Q14703 1052 aa8.16□□□□□ -1.1
CKS1BP1-201ENST00000555221 LRP10Q7Z4F1 713 aa8.16□□□□□ -1.1
CKS1BP1-201ENST00000555221 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.16□□□□□ -1.1
CKS1BP1-201ENST00000555221 MRFAP1L1Q96HT8 127 aa8.16□□□□□ -1.1
CKS1BP1-201ENST00000555221 FAM46AQ96IP4 442 aaKnown RBP8.16□□□□□ -1.1
CKS1BP1-201ENST00000555221 FBRSQ9HAH7 460 aa8.16□□□□□ -1.1
CKS1BP1-201ENST00000555221 CST3P01034 146 aaPredicted RBP8.15□□□□□ -1.1
CKS1BP1-201ENST00000555221 RAB6AP20340 208 aa8.15□□□□□ -1.1
CKS1BP1-201ENST00000555221 DDR2Q16832 855 aa8.15□□□□□ -1.1
CKS1BP1-201ENST00000555221 LARP1BQ659C4 914 aaKnown RBP8.15□□□□□ -1.1
CKS1BP1-201ENST00000555221 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.15□□□□□ -1.1
CKS1BP1-201ENST00000555221 TXNRD3Q86VQ6 643 aa8.15□□□□□ -1.1
CKS1BP1-201ENST00000555221 PHACTR4Q8IZ21 702 aa8.15□□□□□ -1.1
CKS1BP1-201ENST00000555221 TNKS2Q9H2K2 1166 aa8.15□□□□□ -1.1
CKS1BP1-201ENST00000555221 ACSS3Q9H6R3 686 aa8.15□□□□□ -1.1
CKS1BP1-201ENST00000555221 UPK3BL1B0FP48 263 aa8.14□□□□□ -1.11
CKS1BP1-201ENST00000555221 UPK3BL2E5RIL1 263 aa8.14□□□□□ -1.11
CKS1BP1-201ENST00000555221 LRIG2O94898 1065 aa8.14□□□□□ -1.11
CKS1BP1-201ENST00000555221 SLBPQ14493 270 aaKnown RBP eCLIP8.14□□□□□ -1.11
CKS1BP1-201ENST00000555221 NKG7Q16617 165 aa8.14□□□□□ -1.11
CKS1BP1-201ENST00000555221 CELF2-AS1Q8N7Q2 184 aa8.14□□□□□ -1.11
CKS1BP1-201ENST00000555221 UTP4Q969X6 686 aaKnown RBP8.14□□□□□ -1.11
CKS1BP1-201ENST00000555221 CCDC74BQ96LY2 380 aa8.14□□□□□ -1.11
CKS1BP1-201ENST00000555221 UBL7Q96S82 380 aaPredicted RBP8.14□□□□□ -1.11
CKS1BP1-201ENST00000555221 SRPK1Q96SB4 655 aaKnown RBP8.14□□□□□ -1.11
CKS1BP1-201ENST00000555221 FOXQ1Q9C009 403 aa8.14□□□□□ -1.11
CKS1BP1-201ENST00000555221 PHAXQ9H814 394 aaKnown RBP8.14□□□□□ -1.11
CKS1BP1-201ENST00000555221 CDK11AQ9UQ88 783 aaPredicted RBP8.14□□□□□ -1.11
CKS1BP1-201ENST00000555221 RGS13O14921 159 aa8.13□□□□□ -1.11
CKS1BP1-201ENST00000555221 ACRP10323 421 aa8.13□□□□□ -1.11
CKS1BP1-201ENST00000555221 MAP7Q14244 749 aa8.13□□□□□ -1.11
CKS1BP1-201ENST00000555221 PRAMEF13Q5VWM6 474 aa8.13□□□□□ -1.11
CKS1BP1-201ENST00000555221 UNC5AQ6ZN44 842 aa8.13□□□□□ -1.11
CKS1BP1-201ENST00000555221 ARMCX6Q7L4S7 300 aa8.13□□□□□ -1.11
CKS1BP1-201ENST00000555221 DZIP1LQ8IYY4 767 aaKnown RBP8.13□□□□□ -1.11
CKS1BP1-201ENST00000555221 MFSD2AQ8NA29 543 aa8.13□□□□□ -1.11
CKS1BP1-201ENST00000555221 CYB5D2Q8WUJ1 264 aa8.13□□□□□ -1.11
CKS1BP1-201ENST00000555221 DHRS1Q96LJ7 313 aa8.13□□□□□ -1.11
CKS1BP1-201ENST00000555221 SLC9A7Q96T83 725 aa8.13□□□□□ -1.11
CKS1BP1-201ENST00000555221 CCDC113Q9H0I3 377 aa8.13□□□□□ -1.11
CKS1BP1-201ENST00000555221 PIF1Q9H611 641 aa8.13□□□□□ -1.11
CKS1BP1-201ENST00000555221 TMA7Q9Y2S6 64 aaKnown RBP8.13□□□□□ -1.11
CKS1BP1-201ENST00000555221 DAGLAQ9Y4D2 1042 aa8.13□□□□□ -1.11
CKS1BP1-201ENST00000555221 CDPF1Q6NVV7 123 aa8.12□□□□□ -1.11
CKS1BP1-201ENST00000555221 UBE3DQ7Z6J8 389 aa8.12□□□□□ -1.11
CKS1BP1-201ENST00000555221 EZH1Q92800 747 aaPredicted RBP8.12□□□□□ -1.11
CKS1BP1-201ENST00000555221 MYRFLQ96LU7 910 aa8.12□□□□□ -1.11
CKS1BP1-201ENST00000555221 DEPDC7Q96QD5 511 aa8.12□□□□□ -1.11
CKS1BP1-201ENST00000555221 DPH2Q9BQC3 489 aaPredicted RBP8.12□□□□□ -1.11
CKS1BP1-201ENST00000555221 SEMA6CQ9H3T2 930 aa8.12□□□□□ -1.11
CKS1BP1-201ENST00000555221 MAPK8IP1Q9UQF2 711 aa8.12□□□□□ -1.11
CKS1BP1-201ENST00000555221 MSRB2Q9Y3D2 182 aa8.12□□□□□ -1.11
CKS1BP1-201ENST00000555221 DDAH1O94760 285 aa8.11□□□□□ -1.11
CKS1BP1-201ENST00000555221 NFICP08651 508 aa8.11□□□□□ -1.11
CKS1BP1-201ENST00000555221 RXRBP28702 533 aa8.11□□□□□ -1.11
CKS1BP1-201ENST00000555221 GBP1P32455 592 aa8.11□□□□□ -1.11
CKS1BP1-201ENST00000555221 NCAPHQ15003 741 aa8.11□□□□□ -1.11
CKS1BP1-201ENST00000555221 ZYXQ15942 572 aaKnown RBP8.11□□□□□ -1.11
CKS1BP1-201ENST00000555221 BBS9Q3SYG4 887 aa8.11□□□□□ -1.11
CKS1BP1-201ENST00000555221 GIMAP6Q6P9H5 292 aa8.11□□□□□ -1.11
CKS1BP1-201ENST00000555221 FBLIM1Q8WUP2 373 aa8.11□□□□□ -1.11
CKS1BP1-201ENST00000555221 KIF2CQ99661 725 aa8.11□□□□□ -1.11
CKS1BP1-201ENST00000555221 ST7Q9NRC1 585 aa8.11□□□□□ -1.11
CKS1BP1-201ENST00000555221 SNTG2Q9NY99 539 aa8.11□□□□□ -1.11
CKS1BP1-201ENST00000555221 BMP3P12645 472 aa8.1□□□□□ -1.11
CKS1BP1-201ENST00000555221 MAP4P27816 1152 aaKnown RBP8.1□□□□□ -1.11
CKS1BP1-201ENST00000555221 CHMP4BP1P59074 171 aa8.1□□□□□ -1.11
CKS1BP1-201ENST00000555221 SGO2Q562F6 1265 aa8.1□□□□□ -1.11
CKS1BP1-201ENST00000555221 ZNF746Q6NUN9 644 aaPredicted RBP8.1□□□□□ -1.11
CKS1BP1-201ENST00000555221 FAM20CQ8IXL6 584 aa8.1□□□□□ -1.11
CKS1BP1-201ENST00000555221 FAM178BQ8IXR5 827 aa8.1□□□□□ -1.11
CKS1BP1-201ENST00000555221 MEGF10Q96KG7 1140 aa8.1□□□□□ -1.11
CKS1BP1-201ENST00000555221 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.1□□□□□ -1.11
CKS1BP1-201ENST00000555221 CCDC85CA6NKD9 419 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms