RNA–Protein interactions for RNA: ENST00000555017.5

SEC23A-208, Transcript of Sec23 homolog A, coat complex II component, human

TSL 4

Gene SEC23A, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC23A-208	ENST00000555017	PPP2R1A	P30153	589 aa		4.26	□□□□□ -1.73
SEC23A-208	ENST00000555017	IREB2	P48200	963 aa	Known RBP	4.26	□□□□□ -1.73
SEC23A-208	ENST00000555017	ZNF157	P51786	506 aa	Predicted RBP	4.26	□□□□□ -1.73
SEC23A-208	ENST00000555017	RAC1	P63000	192 aa		4.26	□□□□□ -1.73
SEC23A-208	ENST00000555017	PLCB3	Q01970	1234 aa		4.26	□□□□□ -1.73
SEC23A-208	ENST00000555017	PDE3B	Q13370	1112 aa		4.26	□□□□□ -1.73
SEC23A-208	ENST00000555017	ADGRE1	Q14246	886 aa		4.26	□□□□□ -1.73
SEC23A-208	ENST00000555017	MBTPS1	Q14703	1052 aa		4.26	□□□□□ -1.73
SEC23A-208	ENST00000555017	RRS1	Q15050	365 aa	Known RBP	4.26	□□□□□ -1.73
SEC23A-208	ENST00000555017	LENG1	Q96BZ8	264 aa	Predicted RBP	4.26	□□□□□ -1.73
SEC23A-208	ENST00000555017	GZF1	Q9H116	711 aa	Predicted RBP	4.26	□□□□□ -1.73
SEC23A-208	ENST00000555017	TPSG1	Q9NRR2	321 aa		4.26	□□□□□ -1.73
SEC23A-208	ENST00000555017	LTN1	O94822	1766 aa		4.26	□□□□□ -1.73
SEC23A-208	ENST00000555017	USP6	P35125	1406 aa		4.26	□□□□□ -1.73
SEC23A-208	ENST00000555017	SSH2	Q76I76	1423 aa		4.26	□□□□□ -1.73
SEC23A-208	ENST00000555017	MED1	Q15648	1581 aa	Predicted RBP	4.26	□□□□□ -1.73
SEC23A-208	ENST00000555017	CRYBG1	Q9Y4K1	1723 aa		4.26	□□□□□ -1.73
SEC23A-208	ENST00000555017	MSH6	P52701	1360 aa		4.26	□□□□□ -1.73
SEC23A-208	ENST00000555017	SHPRH	Q149N8	1683 aa		4.26	□□□□□ -1.73
SEC23A-208	ENST00000555017	ALS2	Q96Q42	1657 aa		4.26	□□□□□ -1.73
SEC23A-208	ENST00000555017	PXDN	Q92626	1479 aa		4.25	□□□□□ -1.73
SEC23A-208	ENST00000555017	NHSL1	Q5SYE7	1610 aa		4.25	□□□□□ -1.73
SEC23A-208	ENST00000555017		A0A096LPE4	126 aa		4.25	□□□□□ -1.73
SEC23A-208	ENST00000555017	PNMA6F	A0A0J9YX94	578 aa		4.25	□□□□□ -1.73
SEC23A-208	ENST00000555017		A0A1W2PPZ6	126 aa		4.25	□□□□□ -1.73
SEC23A-208	ENST00000555017	SPDYE3	A6NKU9	549 aa		4.25	□□□□□ -1.73
SEC23A-208	ENST00000555017	PIK3R2	O00459	728 aa		4.25	□□□□□ -1.73
SEC23A-208	ENST00000555017	PPM1G	O15355	546 aa	Predicted RBP	4.25	□□□□□ -1.73
SEC23A-208	ENST00000555017	PHLPP1	O60346	1717 aa		4.25	□□□□□ -1.73
SEC23A-208	ENST00000555017	ECEL1	O95672	775 aa		4.25	□□□□□ -1.73
SEC23A-208	ENST00000555017	DLGAP3	O95886	979 aa		4.25	□□□□□ -1.73
SEC23A-208	ENST00000555017	APBA3	O96018	575 aa		4.25	□□□□□ -1.73
SEC23A-208	ENST00000555017	EDN3	P14138	238 aa		4.25	□□□□□ -1.73
SEC23A-208	ENST00000555017	PTPRA	P18433	802 aa		4.25	□□□□□ -1.73
SEC23A-208	ENST00000555017	ITGB7	P26010	798 aa		4.25	□□□□□ -1.73
SEC23A-208	ENST00000555017	GATA4	P43694	442 aa		4.25	□□□□□ -1.73
SEC23A-208	ENST00000555017	MAPK8	P45983	427 aa		4.25	□□□□□ -1.73
SEC23A-208	ENST00000555017	TAGLN	Q01995	201 aa	Known RBP	4.25	□□□□□ -1.73
SEC23A-208	ENST00000555017	ZNF423	Q2M1K9	1284 aa		4.25	□□□□□ -1.73
SEC23A-208	ENST00000555017	KIAA0319	Q5VV43	1072 aa		4.25	□□□□□ -1.73
SEC23A-208	ENST00000555017	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	4.25	□□□□□ -1.73
SEC23A-208	ENST00000555017	ANKAR	Q7Z5J8	1434 aa		4.25	□□□□□ -1.73
SEC23A-208	ENST00000555017	MORC1	Q86VD1	984 aa		4.25	□□□□□ -1.73
SEC23A-208	ENST00000555017	CCNJL	Q8IV13	435 aa		4.25	□□□□□ -1.73
SEC23A-208	ENST00000555017	FAM9B	Q8IZU0	186 aa		4.25	□□□□□ -1.73
SEC23A-208	ENST00000555017	GLIS3	Q8NEA6	775 aa		4.25	□□□□□ -1.73
SEC23A-208	ENST00000555017	UBASH3B	Q8TF42	649 aa		4.25	□□□□□ -1.73
SEC23A-208	ENST00000555017	WFDC12	Q8WWY7	111 aa		4.25	□□□□□ -1.73
SEC23A-208	ENST00000555017	ALKBH8	Q96BT7	664 aa	Known RBP	4.25	□□□□□ -1.73
SEC23A-208	ENST00000555017	MEGF10	Q96KG7	1140 aa		4.25	□□□□□ -1.73
SEC23A-208	ENST00000555017	CITED4	Q96RK1	184 aa		4.25	□□□□□ -1.73
SEC23A-208	ENST00000555017	EHD4	Q9H223	541 aa		4.25	□□□□□ -1.73
SEC23A-208	ENST00000555017	LIN7B	Q9HAP6	207 aa		4.25	□□□□□ -1.73
SEC23A-208	ENST00000555017	TERF2IP	Q9NYB0	399 aa		4.25	□□□□□ -1.73
SEC23A-208	ENST00000555017	USP21	Q9UK80	565 aa		4.25	□□□□□ -1.73
SEC23A-208	ENST00000555017	POLR3A	O14802	1390 aa	Predicted RBP	4.25	□□□□□ -1.73
SEC23A-208	ENST00000555017	PARD3	Q8TEW0	1356 aa		4.25	□□□□□ -1.73
SEC23A-208	ENST00000555017	ABCA3	Q99758	1704 aa		4.24	□□□□□ -1.73
SEC23A-208	ENST00000555017		H3BRJ5	948 aa		4.24	□□□□□ -1.73
SEC23A-208	ENST00000555017	GADD45B	O75293	160 aa	Predicted RBP	4.24	□□□□□ -1.73
SEC23A-208	ENST00000555017	P4HB	P07237	508 aa	Known RBP	4.24	□□□□□ -1.73
SEC23A-208	ENST00000555017	CTSB	P07858	339 aa		4.24	□□□□□ -1.73
SEC23A-208	ENST00000555017	ESRRA	P11474	423 aa	Predicted RBP	4.24	□□□□□ -1.73
SEC23A-208	ENST00000555017	MTHFS	P49914	203 aa		4.24	□□□□□ -1.73
SEC23A-208	ENST00000555017	NLRP12	P59046	1061 aa		4.24	□□□□□ -1.73
SEC23A-208	ENST00000555017	FAAP100	Q0VG06	881 aa		4.24	□□□□□ -1.73
SEC23A-208	ENST00000555017	GRM2	Q14416	872 aa		4.24	□□□□□ -1.73
SEC23A-208	ENST00000555017	CHRNA2	Q15822	529 aa		4.24	□□□□□ -1.73
SEC23A-208	ENST00000555017	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	4.24	□□□□□ -1.73
SEC23A-208	ENST00000555017	KIAA1211	Q6ZU35	1233 aa		4.24	□□□□□ -1.73
SEC23A-208	ENST00000555017	CCDC146	Q8IYE0	955 aa		4.24	□□□□□ -1.73
SEC23A-208	ENST00000555017	BSND	Q8WZ55	320 aa		4.24	□□□□□ -1.73
SEC23A-208	ENST00000555017	LTV1	Q96GA3	475 aa	Predicted RBP	4.24	□□□□□ -1.73
SEC23A-208	ENST00000555017	DMRTB1	Q96MA1	342 aa		4.24	□□□□□ -1.73
SEC23A-208	ENST00000555017	ASB16	Q96NS5	453 aa		4.24	□□□□□ -1.73
SEC23A-208	ENST00000555017	PUS7	Q96PZ0	661 aa	Known RBP	4.24	□□□□□ -1.73
SEC23A-208	ENST00000555017	BHLHE41	Q9C0J9	482 aa	Predicted RBP	4.24	□□□□□ -1.73
SEC23A-208	ENST00000555017	MRS2	Q9HD23	443 aa		4.24	□□□□□ -1.73
SEC23A-208	ENST00000555017	KIF1A	Q12756	1690 aa		4.24	□□□□□ -1.73
SEC23A-208	ENST00000555017	PHRF1	Q9P1Y6	1649 aa	Known RBP	4.24	□□□□□ -1.73
SEC23A-208	ENST00000555017	EDC4	Q6P2E9	1401 aa	Known RBP	4.23	□□□□□ -1.73
SEC23A-208	ENST00000555017	ANKRD33B	A6NCL7	494 aa		4.23	□□□□□ -1.73
SEC23A-208	ENST00000555017	C9orf172	C9J069	976 aa		4.23	□□□□□ -1.73
SEC23A-208	ENST00000555017		F8W735	103 aa	Predicted RBP	4.23	□□□□□ -1.73
SEC23A-208	ENST00000555017	CD68	P34810	354 aa	Predicted RBP	4.23	□□□□□ -1.73
SEC23A-208	ENST00000555017	ZC3H6	P61129	1189 aa	Known RBP	4.23	□□□□□ -1.73
SEC23A-208	ENST00000555017	FMR1	Q06787	632 aa	Known RBP eCLIP	4.23	□□□□□ -1.73
SEC23A-208	ENST00000555017	ENOX2	Q16206	610 aa	Known RBP	4.23	□□□□□ -1.73
SEC23A-208	ENST00000555017	RSPO4	Q2I0M5	234 aa	Predicted RBP	4.23	□□□□□ -1.73
SEC23A-208	ENST00000555017	HSP90AB2P	Q58FF8	381 aa		4.23	□□□□□ -1.73
SEC23A-208	ENST00000555017	IGF2-AS	Q6U949	168 aa		4.23	□□□□□ -1.73
SEC23A-208	ENST00000555017	NXPE4	Q6UWF7	544 aa		4.23	□□□□□ -1.73
SEC23A-208	ENST00000555017	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	4.23	□□□□□ -1.73
SEC23A-208	ENST00000555017	SND1	Q7KZF4	910 aa	Known RBP eCLIP	4.23	□□□□□ -1.73
SEC23A-208	ENST00000555017	ALYREF	Q86V81	257 aa	Known RBP	4.23	□□□□□ -1.73
SEC23A-208	ENST00000555017	DTWD1	Q8N5C7	304 aa		4.23	□□□□□ -1.73
SEC23A-208	ENST00000555017	UBL7	Q96S82	380 aa	Predicted RBP	4.23	□□□□□ -1.73
SEC23A-208	ENST00000555017	SSBP4	Q9BWG4	385 aa	Predicted RBP	4.23	□□□□□ -1.73
SEC23A-208	ENST00000555017	OSBPL7	Q9BZF2	842 aa		4.23	□□□□□ -1.73
SEC23A-208	ENST00000555017	ABCB6	Q9NP58	842 aa		4.23	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms