RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 SCARF2Q96GP6 870 aaPredicted RBP7.76□□□□□ -1.17
PSEN1-211ENST00000554995 PHAXQ9H814 394 aaKnown RBP7.76□□□□□ -1.17
PSEN1-211ENST00000554995 ADAM30Q9UKF2 790 aa7.76□□□□□ -1.17
PSEN1-211ENST00000554995 NOP58Q9Y2X3 529 aaKnown RBP7.76□□□□□ -1.17
PSEN1-211ENST00000554995 COL4A3BPQ9Y5P4 624 aa7.76□□□□□ -1.17
PSEN1-211ENST00000554995 PTCH2Q9Y6C5 1203 aa7.76□□□□□ -1.17
PSEN1-211ENST00000554995 FAM86C2PA6NEL3 165 aa7.75□□□□□ -1.17
PSEN1-211ENST00000554995 CHURC1-FNTBB4DL54 471 aa7.75□□□□□ -1.17
PSEN1-211ENST00000554995 PPP1R12AO14974 1030 aaPredicted RBP7.75□□□□□ -1.17
PSEN1-211ENST00000554995 AOC2O75106 756 aa7.75□□□□□ -1.17
PSEN1-211ENST00000554995 GYS2P54840 703 aa7.75□□□□□ -1.17
PSEN1-211ENST00000554995 RING1Q06587 406 aa7.75□□□□□ -1.17
PSEN1-211ENST00000554995 NCAPHQ15003 741 aa7.75□□□□□ -1.17
PSEN1-211ENST00000554995 FOXD4L6Q3SYB3 417 aaPredicted RBP7.75□□□□□ -1.17
PSEN1-211ENST00000554995 FOXD4L3Q6VB84 417 aaPredicted RBP7.75□□□□□ -1.17
PSEN1-211ENST00000554995 ILDR2Q71H61 639 aa7.75□□□□□ -1.17
PSEN1-211ENST00000554995 EEPD1Q7L9B9 569 aa7.75□□□□□ -1.17
PSEN1-211ENST00000554995 GALNT6Q8NCL4 622 aa7.75□□□□□ -1.17
PSEN1-211ENST00000554995 WNT10AQ9GZT5 417 aa7.75□□□□□ -1.17
PSEN1-211ENST00000554995 PRDM6Q9NQX0 595 aa7.75□□□□□ -1.17
PSEN1-211ENST00000554995 PCDHB10Q9UN67 800 aa7.75□□□□□ -1.17
PSEN1-211ENST00000554995 HIF3AQ9Y2N7 669 aa7.75□□□□□ -1.17
PSEN1-211ENST00000554995 ADAMTS2O95450 1211 aa7.74□□□□□ -1.17
PSEN1-211ENST00000554995 SLFN14P0C7P3 912 aa7.74□□□□□ -1.17
PSEN1-211ENST00000554995 ANAPC15P60006 121 aa7.74□□□□□ -1.17
PSEN1-211ENST00000554995 ETF1P62495 437 aaKnown RBP7.74□□□□□ -1.17
PSEN1-211ENST00000554995 TKFCQ3LXA3 575 aa7.74□□□□□ -1.17
PSEN1-211ENST00000554995 PPM1JQ5JR12 505 aa7.74□□□□□ -1.17
PSEN1-211ENST00000554995 MAP4K3Q8IVH8 894 aa7.74□□□□□ -1.17
PSEN1-211ENST00000554995 DMRTC2Q8IXT2 367 aaPredicted RBP7.74□□□□□ -1.17
PSEN1-211ENST00000554995 ACSF2Q96CM8 615 aaPredicted RBP7.74□□□□□ -1.17
PSEN1-211ENST00000554995 BTBD6Q96KE9 485 aa7.74□□□□□ -1.17
PSEN1-211ENST00000554995 FEZ1Q99689 392 aa7.74□□□□□ -1.17
PSEN1-211ENST00000554995 PCDH12Q9NPG4 1184 aa7.74□□□□□ -1.17
PSEN1-211ENST00000554995 ENAMQ9NRM1 1142 aa7.74□□□□□ -1.17
PSEN1-211ENST00000554995 NID1P14543 1247 aa7.73□□□□□ -1.17
PSEN1-211ENST00000554995 CD68P34810 354 aaPredicted RBP7.73□□□□□ -1.17
PSEN1-211ENST00000554995 ERVK-24P63145 666 aa7.73□□□□□ -1.17
PSEN1-211ENST00000554995 KIAA1211LQ6NV74 962 aa7.73□□□□□ -1.17
PSEN1-211ENST00000554995 KLHL6Q8WZ60 621 aa7.73□□□□□ -1.17
PSEN1-211ENST00000554995 LRRC4BQ9NT99 713 aa7.73□□□□□ -1.17
PSEN1-211ENST00000554995 KCNK4Q9NYG8 393 aa7.73□□□□□ -1.17
PSEN1-211ENST00000554995 OIP5O43482 229 aa7.72□□□□□ -1.17
PSEN1-211ENST00000554995 SUSD5O60279 629 aa7.72□□□□□ -1.17
PSEN1-211ENST00000554995 RAB11FIP3O75154 756 aa7.72□□□□□ -1.17
PSEN1-211ENST00000554995 DEAF1O75398 565 aaPredicted RBP7.72□□□□□ -1.17
PSEN1-211ENST00000554995 RAG1P15918 1043 aa7.72□□□□□ -1.17
PSEN1-211ENST00000554995 POLR2BP30876 1174 aaKnown RBP7.72□□□□□ -1.17
PSEN1-211ENST00000554995 ID3Q02535 119 aa7.72□□□□□ -1.17
PSEN1-211ENST00000554995 COL9A3Q14050 684 aaPredicted RBP7.72□□□□□ -1.17
PSEN1-211ENST00000554995 SLC10A6Q3KNW5 377 aa7.72□□□□□ -1.17
PSEN1-211ENST00000554995 ZBTB37Q5TC79 503 aa7.72□□□□□ -1.17
PSEN1-211ENST00000554995 FAM13CQ8NE31 585 aa7.72□□□□□ -1.17
PSEN1-211ENST00000554995 TMX1Q9H3N1 280 aa7.72□□□□□ -1.17
PSEN1-211ENST00000554995 PICK1Q9NRD5 415 aa7.72□□□□□ -1.17
PSEN1-211ENST00000554995 RAD18Q9NS91 495 aa7.72□□□□□ -1.17
PSEN1-211ENST00000554995 TJP2Q9UDY2 1190 aa7.72□□□□□ -1.17
PSEN1-211ENST00000554995 SYNGAP1Q96PV0 1343 aa7.72□□□□□ -1.17
PSEN1-211ENST00000554995 KRTAP4-8A0A0G2JLE6 195 aa7.71□□□□□ -1.18
PSEN1-211ENST00000554995 SHISA8B8ZZ34 492 aa7.71□□□□□ -1.18
PSEN1-211ENST00000554995 FANCGO15287 622 aa7.71□□□□□ -1.18
PSEN1-211ENST00000554995 TMPRSS2O15393 492 aa7.71□□□□□ -1.18
PSEN1-211ENST00000554995 ASMTLO95671 621 aa7.71□□□□□ -1.18
PSEN1-211ENST00000554995 FAM153BP0C7A2 387 aa7.71□□□□□ -1.18
PSEN1-211ENST00000554995 SLC7A5Q01650 507 aa7.71□□□□□ -1.18
PSEN1-211ENST00000554995 TCEA2Q15560 299 aa7.71□□□□□ -1.18
PSEN1-211ENST00000554995 GNPTABQ3T906 1256 aa7.71□□□□□ -1.18
PSEN1-211ENST00000554995 TAF7LQ5H9L4 462 aa7.71□□□□□ -1.18
PSEN1-211ENST00000554995 MCATQ8IVS2 390 aaKnown RBP7.71□□□□□ -1.18
PSEN1-211ENST00000554995 ZSWIM2Q8NEG5 633 aa7.71□□□□□ -1.18
PSEN1-211ENST00000554995 UBASH3BQ8TF42 649 aa7.71□□□□□ -1.18
PSEN1-211ENST00000554995 SPATA9Q9BWV2 254 aa7.71□□□□□ -1.18
PSEN1-211ENST00000554995 ZNF214Q9UL59 606 aaPredicted RBP7.71□□□□□ -1.18
PSEN1-211ENST00000554995 PPP1R9AQ9ULJ8 1098 aa7.71□□□□□ -1.18
PSEN1-211ENST00000554995 NTF4P34130 210 aa7.7□□□□□ -1.18
PSEN1-211ENST00000554995 EXOSC6Q5RKV6 272 aaKnown RBP7.7□□□□□ -1.18
PSEN1-211ENST00000554995 SLFN12Q8IYM2 578 aa7.7□□□□□ -1.18
PSEN1-211ENST00000554995 TMEM87BQ96K49 555 aa7.7□□□□□ -1.18
PSEN1-211ENST00000554995 AMPD1P23109 780 aa7.69□□□□□ -1.18
PSEN1-211ENST00000554995 CCNFP41002 786 aa7.69□□□□□ -1.18
PSEN1-211ENST00000554995 MASP1P48740 699 aa7.69□□□□□ -1.18
PSEN1-211ENST00000554995 YARSP54577 528 aaKnown RBP7.69□□□□□ -1.18
PSEN1-211ENST00000554995 TMEM67Q5HYA8 995 aa7.69□□□□□ -1.18
PSEN1-211ENST00000554995 AKAP4Q5JQC9 854 aa7.69□□□□□ -1.18
PSEN1-211ENST00000554995 PHACTR4Q8IZ21 702 aa7.69□□□□□ -1.18
PSEN1-211ENST00000554995 LRRC47Q8N1G4 583 aaKnown RBP7.69□□□□□ -1.18
PSEN1-211ENST00000554995 SYNPOQ8N3V7 929 aa7.69□□□□□ -1.18
PSEN1-211ENST00000554995 ZNF507Q8TCN5 953 aa7.69□□□□□ -1.18
PSEN1-211ENST00000554995 DCAF5Q96JK2 942 aa7.69□□□□□ -1.18
PSEN1-211ENST00000554995 EPN3Q9H201 632 aa7.69□□□□□ -1.18
PSEN1-211ENST00000554995 FBRSQ9HAH7 460 aa7.69□□□□□ -1.18
PSEN1-211ENST00000554995 CRIM1Q9NZV1 1036 aa7.69□□□□□ -1.18
PSEN1-211ENST00000554995 CD2APQ9Y5K6 639 aa7.69□□□□□ -1.18
PSEN1-211ENST00000554995 ADCY3O60266 1144 aa7.68□□□□□ -1.18
PSEN1-211ENST00000554995 BCRP11274 1271 aa7.68□□□□□ -1.18
PSEN1-211ENST00000554995 AMPD3Q01432 767 aa7.68□□□□□ -1.18
PSEN1-211ENST00000554995 DUOXA2Q1HG44 320 aa7.68□□□□□ -1.18
PSEN1-211ENST00000554995 SLC6A19Q695T7 634 aa7.68□□□□□ -1.18
PSEN1-211ENST00000554995 HID1Q8IV36 788 aa7.68□□□□□ -1.18
PSEN1-211ENST00000554995 MRPL41Q8IXM3 137 aaKnown RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms