RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-231ENST00000554994 LGR6Q9HBX8 967 aa6.13□□□□□ -1.43
ATXN3-231ENST00000554994 GOPCQ9HD26 462 aa6.13□□□□□ -1.43
ATXN3-231ENST00000554994 SNRKQ9NRH2 765 aa6.13□□□□□ -1.43
ATXN3-231ENST00000554994 NPC1L1Q9UHC9 1359 aa6.13□□□□□ -1.43
ATXN3-231ENST00000554994 SLX4Q8IY92 1834 aa6.13□□□□□ -1.43
ATXN3-231ENST00000554994 ANKRD31Q8N7Z5 1873 aa6.13□□□□□ -1.43
ATXN3-231ENST00000554994 FAM155AB1AL88 458 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-231ENST00000554994 CDK2AP1O14519 115 aa6.12□□□□□ -1.43
ATXN3-231ENST00000554994 MTHFSDQ2M296 383 aaKnown RBP6.12□□□□□ -1.43
ATXN3-231ENST00000554994 CCDC146Q8IYE0 955 aa6.12□□□□□ -1.43
ATXN3-231ENST00000554994 GPC2Q8N158 579 aa6.12□□□□□ -1.43
ATXN3-231ENST00000554994 IL27Q8NEV9 243 aa6.12□□□□□ -1.43
ATXN3-231ENST00000554994 RTF1Q92541 710 aaKnown RBP6.12□□□□□ -1.43
ATXN3-231ENST00000554994 HHIPL1Q96JK4 782 aa6.12□□□□□ -1.43
ATXN3-231ENST00000554994 PHACTR3Q96KR7 559 aa6.12□□□□□ -1.43
ATXN3-231ENST00000554994 PNNQ9H307 717 aaKnown RBP6.12□□□□□ -1.43
ATXN3-231ENST00000554994 PRDM6Q9NQX0 595 aa6.12□□□□□ -1.43
ATXN3-231ENST00000554994 IQSEC3Q9UPP2 1182 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-231ENST00000554994 MYBBP1AQ9BQG0 1328 aaKnown RBP6.11□□□□□ -1.43
ATXN3-231ENST00000554994 MAPK8IP3Q9UPT6 1336 aa6.11□□□□□ -1.43
ATXN3-231ENST00000554994 A0A0A0MRY4 1105 aa6.11□□□□□ -1.43
ATXN3-231ENST00000554994 GNAT3A8MTJ3 354 aa6.11□□□□□ -1.43
ATXN3-231ENST00000554994 TMEM229AB2RXF0 380 aa6.11□□□□□ -1.43
ATXN3-231ENST00000554994 ERVV-2B6SEH9 535 aa6.11□□□□□ -1.43
ATXN3-231ENST00000554994 APBB1O00213 710 aa6.11□□□□□ -1.43
ATXN3-231ENST00000554994 LILRB5O75023 590 aa6.11□□□□□ -1.43
ATXN3-231ENST00000554994 COBLO75128 1261 aa6.11□□□□□ -1.43
ATXN3-231ENST00000554994 EN2P19622 333 aaPredicted RBP6.11□□□□□ -1.43
ATXN3-231ENST00000554994 TEFQ10587 303 aa6.11□□□□□ -1.43
ATXN3-231ENST00000554994 PKN2Q16513 984 aaKnown RBP6.11□□□□□ -1.43
ATXN3-231ENST00000554994 TMEM132AQ24JP5 1023 aa6.11□□□□□ -1.43
ATXN3-231ENST00000554994 MCTP1Q6DN14 999 aa6.11□□□□□ -1.43
ATXN3-231ENST00000554994 FBXO46Q6PJ61 603 aaPredicted RBP6.11□□□□□ -1.43
ATXN3-231ENST00000554994 ZNF295-AS1Q8N0V1 137 aa6.11□□□□□ -1.43
ATXN3-231ENST00000554994 ZNF296Q8WUU4 475 aaPredicted RBP6.11□□□□□ -1.43
ATXN3-231ENST00000554994 TNFRSF25Q93038 417 aa6.11□□□□□ -1.43
ATXN3-231ENST00000554994 IGFLR1Q9H665 355 aa6.11□□□□□ -1.43
ATXN3-231ENST00000554994 FZD9O00144 591 aa6.1□□□□□ -1.43
ATXN3-231ENST00000554994 SOX1O00570 391 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-231ENST00000554994 RNMTO43148 476 aaKnown RBP6.1□□□□□ -1.43
ATXN3-231ENST00000554994 TBC1D8O95759 1140 aa6.1□□□□□ -1.43
ATXN3-231ENST00000554994 ELNP15502 786 aa6.1□□□□□ -1.43
ATXN3-231ENST00000554994 RAC1P63000 192 aa6.1□□□□□ -1.43
ATXN3-231ENST00000554994 FKBP4Q02790 459 aaKnown RBP eCLIP6.1□□□□□ -1.43
ATXN3-231ENST00000554994 SPEM2Q0P670 501 aa6.1□□□□□ -1.43
ATXN3-231ENST00000554994 SLC39A6Q13433 755 aa6.1□□□□□ -1.43
ATXN3-231ENST00000554994 DCTN1Q14203 1278 aa6.1□□□□□ -1.43
ATXN3-231ENST00000554994 CCDC93Q567U6 631 aa6.1□□□□□ -1.43
ATXN3-231ENST00000554994 RGMBQ6NW40 437 aa6.1□□□□□ -1.43
ATXN3-231ENST00000554994 INTS5Q6P9B9 1019 aaKnown RBP6.1□□□□□ -1.43
ATXN3-231ENST00000554994 ERICH6Q7L0X2 663 aa6.1□□□□□ -1.43
ATXN3-231ENST00000554994 BANK1Q8NDB2 785 aa6.1□□□□□ -1.43
ATXN3-231ENST00000554994 GAS2L2Q8NHY3 880 aa6.1□□□□□ -1.43
ATXN3-231ENST00000554994 CSRNP1Q96S65 589 aa6.1□□□□□ -1.43
ATXN3-231ENST00000554994 PRKRIP1Q9H875 184 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-231ENST00000554994 TBC1D2BQ9UPU7 963 aa6.1□□□□□ -1.43
ATXN3-231ENST00000554994 LAS1LQ9Y4W2 734 aaKnown RBP6.1□□□□□ -1.43
ATXN3-231ENST00000554994 PAPPA2Q9BXP8 1791 aa6.1□□□□□ -1.43
ATXN3-231ENST00000554994 COL4A5P29400 1685 aa6.1□□□□□ -1.43
ATXN3-231ENST00000554994 KIAA0100Q14667 2235 aaKnown RBP6.1□□□□□ -1.43
ATXN3-231ENST00000554994 SOS1Q07889 1333 aaPredicted RBP6.09□□□□□ -1.43
ATXN3-231ENST00000554994 TJP1Q07157 1748 aa6.09□□□□□ -1.43
ATXN3-231ENST00000554994 PDE6BP35913 854 aa6.09□□□□□ -1.43
ATXN3-231ENST00000554994 IARSP41252 1262 aaKnown RBP6.09□□□□□ -1.43
ATXN3-231ENST00000554994 ZNF157P51786 506 aaPredicted RBP6.09□□□□□ -1.43
ATXN3-231ENST00000554994 NRG1Q02297 640 aaPredicted RBP6.09□□□□□ -1.43
ATXN3-231ENST00000554994 MTFR1Q15390 333 aa6.09□□□□□ -1.43
ATXN3-231ENST00000554994 SOGA3Q5TF21 947 aa6.09□□□□□ -1.43
ATXN3-231ENST00000554994 PRR5LQ6MZQ0 368 aa6.09□□□□□ -1.43
ATXN3-231ENST00000554994 USP50Q70EL3 339 aaPredicted RBP6.09□□□□□ -1.43
ATXN3-231ENST00000554994 MCM10Q7L590 875 aa6.09□□□□□ -1.43
ATXN3-231ENST00000554994 TTC5Q8N0Z6 440 aa6.09□□□□□ -1.43
ATXN3-231ENST00000554994 PLPP7Q8NBV4 271 aa6.09□□□□□ -1.43
ATXN3-231ENST00000554994 NUDT8Q8WV74 236 aa6.09□□□□□ -1.43
ATXN3-231ENST00000554994 JPH1Q9HDC5 661 aaPredicted RBP6.09□□□□□ -1.43
ATXN3-231ENST00000554994 MIS18AQ9NYP9 233 aa6.09□□□□□ -1.43
ATXN3-231ENST00000554994 ZNF232Q9UNY5 417 aa6.09□□□□□ -1.43
ATXN3-231ENST00000554994 RRP7AQ9Y3A4 280 aaKnown RBP6.09□□□□□ -1.43
ATXN3-231ENST00000554994 BCORQ6W2J9 1755 aa6.08□□□□□ -1.44
ATXN3-231ENST00000554994 COL15A1P39059 1388 aa6.08□□□□□ -1.44
ATXN3-231ENST00000554994 ZNF831Q5JPB2 1677 aa6.08□□□□□ -1.44
ATXN3-231ENST00000554994 AKAP11Q9UKA4 1901 aa6.08□□□□□ -1.44
ATXN3-231ENST00000554994 PAX4O43316 350 aa6.08□□□□□ -1.44
ATXN3-231ENST00000554994 EIF6P56537 245 aaKnown RBP6.08□□□□□ -1.44
ATXN3-231ENST00000554994 RIPK4P57078 832 aa6.08□□□□□ -1.44
ATXN3-231ENST00000554994 TBCELQ5QJ74 424 aa6.08□□□□□ -1.44
ATXN3-231ENST00000554994 C20orf204Q6ZNR8 217 aa6.08□□□□□ -1.44
ATXN3-231ENST00000554994 DNAJC10Q8IXB1 793 aa6.08□□□□□ -1.44
ATXN3-231ENST00000554994 FAM9BQ8IZU0 186 aa6.08□□□□□ -1.44
ATXN3-231ENST00000554994 ZDHHC1Q8WTX9 485 aa6.08□□□□□ -1.44
ATXN3-231ENST00000554994 LENG1Q96BZ8 264 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-231ENST00000554994 BRIP1Q9BX63 1249 aa6.08□□□□□ -1.44
ATXN3-231ENST00000554994 SLC52A2Q9HAB3 445 aa6.08□□□□□ -1.44
ATXN3-231ENST00000554994 MRS2Q9HD23 443 aa6.08□□□□□ -1.44
ATXN3-231ENST00000554994 NARFQ9UHQ1 456 aa6.08□□□□□ -1.44
ATXN3-231ENST00000554994 SIPA1L3O60292 1781 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-231ENST00000554994 COL3A1P02461 1466 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-231ENST00000554994 NPHP1O15259 732 aa6.07□□□□□ -1.44
ATXN3-231ENST00000554994 SRGNP10124 158 aa6.07□□□□□ -1.44
ATXN3-231ENST00000554994 VAC14Q08AM6 782 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms