RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 LRSAM1Q6UWE0 723 aa20.4■□□□□ 0.86
SHOX-204ENST00000554971 MIGA2Q7L4E1 593 aa20.4■□□□□ 0.86
SHOX-204ENST00000554971 DNAJC18Q9H819 358 aa20.4■□□□□ 0.86
SHOX-204ENST00000554971 RRAGDQ9NQL2 400 aaPredicted RBP20.4■□□□□ 0.86
SHOX-204ENST00000554971 FAM196BA6NMK8 535 aa20.39■□□□□ 0.86
SHOX-204ENST00000554971 USP17L12C9JPN9 530 aa20.39■□□□□ 0.86
SHOX-204ENST00000554971 USP17L21D6R901 530 aa20.39■□□□□ 0.86
SHOX-204ENST00000554971 MAP3K10Q02779 954 aa20.39■□□□□ 0.86
SHOX-204ENST00000554971 PRKG1Q13976 671 aa20.39■□□□□ 0.86
SHOX-204ENST00000554971 HS1BP3Q53T59 392 aa20.39■□□□□ 0.86
SHOX-204ENST00000554971 GIMAP6Q6P9H5 292 aa20.39■□□□□ 0.86
SHOX-204ENST00000554971 CTR9Q6PD62 1173 aa20.39■□□□□ 0.86
SHOX-204ENST00000554971 DHX36Q9H2U1 1008 aaKnown RBP20.39■□□□□ 0.86
SHOX-204ENST00000554971 SMC3Q9UQE7 1217 aa20.39■□□□□ 0.86
SHOX-204ENST00000554971 LAMA4Q16363 1823 aa20.39■□□□□ 0.85
SHOX-204ENST00000554971 SUPT20HL1Q3ZLR7 823 aa20.39■□□□□ 0.85
SHOX-204ENST00000554971 APPP05067 770 aa20.38■□□□□ 0.85
SHOX-204ENST00000554971 ZSCAN22P10073 491 aaPredicted RBP20.38■□□□□ 0.85
SHOX-204ENST00000554971 C1QTNF8P60827 252 aa20.38■□□□□ 0.85
SHOX-204ENST00000554971 CSPP1Q1MSJ5 1256 aa20.38■□□□□ 0.85
SHOX-204ENST00000554971 CREB3L3Q68CJ9 461 aa20.38■□□□□ 0.85
SHOX-204ENST00000554971 NOL8Q76FK4 1167 aaKnown RBP20.38■□□□□ 0.85
SHOX-204ENST00000554971 METTL16Q86W50 562 aaKnown RBP20.38■□□□□ 0.85
SHOX-204ENST00000554971 JAKMIP1Q96N16 626 aaKnown RBP20.38■□□□□ 0.85
SHOX-204ENST00000554971 PI4KBQ9UBF8 816 aa20.38■□□□□ 0.85
SHOX-204ENST00000554971 RBM8AQ9Y5S9 174 aaKnown RBP20.38■□□□□ 0.85
SHOX-204ENST00000554971 USP2O75604 605 aaPredicted RBP20.37■□□□□ 0.85
SHOX-204ENST00000554971 FGAP02671 866 aa20.37■□□□□ 0.85
SHOX-204ENST00000554971 C12orf60Q5U649 245 aa20.37■□□□□ 0.85
SHOX-204ENST00000554971 ATAD5Q96QE3 1844 aa20.37■□□□□ 0.85
SHOX-204ENST00000554971 ESPNB1AK53 854 aa20.37■□□□□ 0.85
SHOX-204ENST00000554971 STX6O43752 255 aa20.37■□□□□ 0.85
SHOX-204ENST00000554971 GBA2Q9HCG7 927 aaPredicted RBP20.37■□□□□ 0.85
SHOX-204ENST00000554971 APLP1P51693 650 aa20.36■□□□□ 0.85
SHOX-204ENST00000554971 GABPAQ06546 454 aa20.36■□□□□ 0.85
SHOX-204ENST00000554971 KRT32Q14532 448 aa20.36■□□□□ 0.85
SHOX-204ENST00000554971 TMEM63CQ9P1W3 806 aa20.36■□□□□ 0.85
SHOX-204ENST00000554971 PHF20L1A8MW92 1017 aa20.35■□□□□ 0.85
SHOX-204ENST00000554971 POLR3DP05423 398 aaPredicted RBP20.35■□□□□ 0.85
SHOX-204ENST00000554971 TDO2P48775 406 aa20.35■□□□□ 0.85
SHOX-204ENST00000554971 RRP1BQ14684 758 aaKnown RBP20.35■□□□□ 0.85
SHOX-204ENST00000554971 ALX1Q15699 326 aa20.35■□□□□ 0.85
SHOX-204ENST00000554971 MAP3K11Q16584 847 aa20.35■□□□□ 0.85
SHOX-204ENST00000554971 SBK1Q52WX2 424 aa20.35■□□□□ 0.85
SHOX-204ENST00000554971 KLRG1Q96E93 195 aa20.35■□□□□ 0.85
SHOX-204ENST00000554971 NAPBQ9H115 298 aa20.35■□□□□ 0.85
SHOX-204ENST00000554971 EHD4Q9H223 541 aa20.35■□□□□ 0.85
SHOX-204ENST00000554971 ARPP21Q9UBL0 812 aaPredicted RBP20.35■□□□□ 0.85
SHOX-204ENST00000554971 ZMYM6O95789 1325 aa20.35■□□□□ 0.85
SHOX-204ENST00000554971 TMEM88BA6NKF7 163 aa20.35■□□□□ 0.85
SHOX-204ENST00000554971 TBC1D12O60347 775 aa20.35■□□□□ 0.85
SHOX-204ENST00000554971 LETM1O95202 739 aaPredicted RBP20.35■□□□□ 0.85
SHOX-204ENST00000554971 NF2P35240 595 aa20.35■□□□□ 0.85
SHOX-204ENST00000554971 SAPCD2Q86UD0 394 aa20.35■□□□□ 0.85
SHOX-204ENST00000554971 SLC44A5Q8NCS7 719 aa20.35■□□□□ 0.85
SHOX-204ENST00000554971 DYNLL2Q96FJ2 89 aa20.35■□□□□ 0.85
SHOX-204ENST00000554971 DSCC1Q9BVC3 393 aa20.35■□□□□ 0.85
SHOX-204ENST00000554971 SERPINB13Q9UIV8 391 aa20.35■□□□□ 0.85
SHOX-204ENST00000554971 ANGEL1Q9UNK9 670 aaKnown RBP20.35■□□□□ 0.85
SHOX-204ENST00000554971 SLC27A2O14975 620 aa20.34■□□□□ 0.85
SHOX-204ENST00000554971 PPP1R12BO60237 982 aaPredicted RBP20.34■□□□□ 0.85
SHOX-204ENST00000554971 SYT1P21579 422 aa20.34■□□□□ 0.85
SHOX-204ENST00000554971 HTRA3P83110 453 aa20.34■□□□□ 0.85
SHOX-204ENST00000554971 TTC6Q86TZ1 520 aa20.34■□□□□ 0.85
SHOX-204ENST00000554971 NACAP1Q9BZK3 213 aa20.34■□□□□ 0.85
SHOX-204ENST00000554971 UBE2Q2LH0YL09 131 aa20.33■□□□□ 0.85
SHOX-204ENST00000554971 HLA-DOAP06340 250 aa20.33■□□□□ 0.85
SHOX-204ENST00000554971 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.33■□□□□ 0.85
SHOX-204ENST00000554971 HERC5Q9UII4 1024 aaKnown RBP20.33■□□□□ 0.85
SHOX-204ENST00000554971 ZNF112Q9UJU3 913 aa20.33■□□□□ 0.85
SHOX-204ENST00000554971 TACC3Q9Y6A5 838 aa20.33■□□□□ 0.85
SHOX-204ENST00000554971 DOCK1Q14185 1865 aa20.33■□□□□ 0.85
SHOX-204ENST00000554971 ROBO3Q96MS0 1386 aa20.33■□□□□ 0.84
SHOX-204ENST00000554971 MINDY4BA8MYZ0 360 aa20.33■□□□□ 0.84
SHOX-204ENST00000554971 SHROOM1Q2M3G4 852 aaPredicted RBP20.33■□□□□ 0.84
SHOX-204ENST00000554971 ADCK5Q3MIX3 580 aa20.33■□□□□ 0.84
SHOX-204ENST00000554971 LDLRAD1Q5T700 205 aa20.33■□□□□ 0.84
SHOX-204ENST00000554971 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.33■□□□□ 0.84
SHOX-204ENST00000554971 FOXP4Q8IVH2 680 aaPredicted RBP20.33■□□□□ 0.84
SHOX-204ENST00000554971 NBPF3Q9H094 633 aa20.33■□□□□ 0.84
SHOX-204ENST00000554971 F13A1P00488 732 aa20.32■□□□□ 0.84
SHOX-204ENST00000554971 PDCP20941 246 aa20.32■□□□□ 0.84
SHOX-204ENST00000554971 INPP5BP32019 993 aa20.32■□□□□ 0.84
SHOX-204ENST00000554971 SHMT1P34896 483 aa20.32■□□□□ 0.84
SHOX-204ENST00000554971 FKBP1BP68106 108 aa20.32■□□□□ 0.84
SHOX-204ENST00000554971 TTLL12Q14166 644 aaPredicted RBP20.32■□□□□ 0.84
SHOX-204ENST00000554971 FOXD4L5Q5VV16 416 aaPredicted RBP20.32■□□□□ 0.84
SHOX-204ENST00000554971 DCAF15Q66K64 600 aa20.32■□□□□ 0.84
SHOX-204ENST00000554971 BLOC1S2Q6QNY1 142 aa20.32■□□□□ 0.84
SHOX-204ENST00000554971 C2orf69Q8N8R5 385 aa20.32■□□□□ 0.84
SHOX-204ENST00000554971 FOXD4L4Q8WXT5 416 aaPredicted RBP20.32■□□□□ 0.84
SHOX-204ENST00000554971 ZKSCAN4Q969J2 545 aaPredicted RBP20.32■□□□□ 0.84
SHOX-204ENST00000554971 WRNIP1Q96S55 665 aa20.32■□□□□ 0.84
SHOX-204ENST00000554971 RBSNQ9H1K0 784 aa20.32■□□□□ 0.84
SHOX-204ENST00000554971 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.32■□□□□ 0.84
SHOX-204ENST00000554971 PHIPQ8WWQ0 1821 aa20.32■□□□□ 0.84
SHOX-204ENST00000554971 PPARAQ07869 468 aa20.31■□□□□ 0.84
SHOX-204ENST00000554971 HOOK2Q96ED9 719 aa20.31■□□□□ 0.84
SHOX-204ENST00000554971 CLMNQ96JQ2 1002 aa20.31■□□□□ 0.84
SHOX-204ENST00000554971 PDLIM2Q96JY6 352 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms