RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	BACH2	Q9BYV9	841 aa		8.4	□□□□□ -1.06
PSMC6-208	ENST00000554956	BCL11A	Q9H165	835 aa		8.4	□□□□□ -1.06
PSMC6-208	ENST00000554956	FBRS	Q9HAH7	460 aa		8.4	□□□□□ -1.06
PSMC6-208	ENST00000554956	KDM6B	O15054	1643 aa		8.4	□□□□□ -1.07
PSMC6-208	ENST00000554956	KDM5B	Q9UGL1	1544 aa		8.39	□□□□□ -1.07
PSMC6-208	ENST00000554956	FANCG	O15287	622 aa		8.39	□□□□□ -1.07
PSMC6-208	ENST00000554956	LEFTY1	O75610	366 aa		8.39	□□□□□ -1.07
PSMC6-208	ENST00000554956	F13A1	P00488	732 aa		8.39	□□□□□ -1.07
PSMC6-208	ENST00000554956	FAM87A	P0C7U9	286 aa		8.39	□□□□□ -1.07
PSMC6-208	ENST00000554956	LMNB2	Q03252	620 aa		8.39	□□□□□ -1.07
PSMC6-208	ENST00000554956	LRP8	Q14114	963 aa		8.39	□□□□□ -1.07
PSMC6-208	ENST00000554956	TSNAXIP1	Q2TAA8	658 aa		8.39	□□□□□ -1.07
PSMC6-208	ENST00000554956	PIM2	Q9P1W9	311 aa		8.39	□□□□□ -1.07
PSMC6-208	ENST00000554956	CCDC9	Q9Y3X0	531 aa	Known RBP	8.39	□□□□□ -1.07
PSMC6-208	ENST00000554956	EPRS	P07814	1512 aa	Known RBP	8.39	□□□□□ -1.07
PSMC6-208	ENST00000554956	UNCX	A6NJT0	531 aa		8.38	□□□□□ -1.07
PSMC6-208	ENST00000554956	GFRA2	O00451	464 aa		8.38	□□□□□ -1.07
PSMC6-208	ENST00000554956	HYAL3	O43820	417 aa	Predicted RBP	8.38	□□□□□ -1.07
PSMC6-208	ENST00000554956	RECK	O95980	971 aa		8.38	□□□□□ -1.07
PSMC6-208	ENST00000554956	CD97	P48960	835 aa		8.38	□□□□□ -1.07
PSMC6-208	ENST00000554956	GIMAP7	Q8NHV1	300 aa		8.38	□□□□□ -1.07
PSMC6-208	ENST00000554956	PSMG3-AS1	Q96PY0	264 aa		8.38	□□□□□ -1.07
PSMC6-208	ENST00000554956	GGT7	Q9UJ14	662 aa		8.38	□□□□□ -1.07
PSMC6-208	ENST00000554956	LEMD3	Q9Y2U8	911 aa		8.38	□□□□□ -1.07
PSMC6-208	ENST00000554956	SNCAIP	Q9Y6H5	919 aa		8.38	□□□□□ -1.07
PSMC6-208	ENST00000554956	GLI2	P10070	1586 aa		8.37	□□□□□ -1.07
PSMC6-208	ENST00000554956	GRK4	P32298	578 aa		8.37	□□□□□ -1.07
PSMC6-208	ENST00000554956	ETF1	P62495	437 aa	Known RBP	8.37	□□□□□ -1.07
PSMC6-208	ENST00000554956	NKG7	Q16617	165 aa		8.37	□□□□□ -1.07
PSMC6-208	ENST00000554956	ARTN	Q5T4W7	220 aa		8.37	□□□□□ -1.07
PSMC6-208	ENST00000554956	OGFOD3	Q6PK18	319 aa		8.37	□□□□□ -1.07
PSMC6-208	ENST00000554956	TOP6BL	Q8N6T0	577 aa		8.37	□□□□□ -1.07
PSMC6-208	ENST00000554956	METTL22	Q9BUU2	404 aa	Predicted RBP	8.37	□□□□□ -1.07
PSMC6-208	ENST00000554956	WNT10A	Q9GZT5	417 aa		8.37	□□□□□ -1.07
PSMC6-208	ENST00000554956	LRRC4C	Q9HCJ2	640 aa		8.37	□□□□□ -1.07
PSMC6-208	ENST00000554956	PPRC1	Q5VV67	1664 aa	Known RBP	8.37	□□□□□ -1.07
PSMC6-208	ENST00000554956	TSPOAP1	O95153	1857 aa		8.36	□□□□□ -1.07
PSMC6-208	ENST00000554956	LOC100996750	A0A140TA64	210 aa		8.36	□□□□□ -1.07
PSMC6-208	ENST00000554956	FAM221A	A4D161	298 aa		8.36	□□□□□ -1.07
PSMC6-208	ENST00000554956	COBL	O75128	1261 aa		8.36	□□□□□ -1.07
PSMC6-208	ENST00000554956	GART	P22102	1010 aa		8.36	□□□□□ -1.07
PSMC6-208	ENST00000554956	RPL6	Q02878	288 aa	Known RBP	8.36	□□□□□ -1.07
PSMC6-208	ENST00000554956	PWP1	Q13610	501 aa		8.36	□□□□□ -1.07
PSMC6-208	ENST00000554956	SNAP47	Q5SQN1	464 aa		8.36	□□□□□ -1.07
PSMC6-208	ENST00000554956	CDC37L1	Q7L3B6	337 aa		8.36	□□□□□ -1.07
PSMC6-208	ENST00000554956	HS2ST1	Q7LGA3	356 aa		8.36	□□□□□ -1.07
PSMC6-208	ENST00000554956	GOLM1	Q8NBJ4	401 aa		8.36	□□□□□ -1.07
PSMC6-208	ENST00000554956	FBXO27	Q8NI29	283 aa		8.36	□□□□□ -1.07
PSMC6-208	ENST00000554956	ZNF507	Q8TCN5	953 aa		8.36	□□□□□ -1.07
PSMC6-208	ENST00000554956	DUSP23	Q9BVJ7	150 aa		8.36	□□□□□ -1.07
PSMC6-208	ENST00000554956	KRTAP4-6	Q9BYQ5	205 aa		8.36	□□□□□ -1.07
PSMC6-208	ENST00000554956		U3KQE9	123 aa		8.36	□□□□□ -1.07
PSMC6-208	ENST00000554956	PRX	Q9BXM0	1461 aa		8.36	□□□□□ -1.07
PSMC6-208	ENST00000554956	KIAA0556	O60303	1618 aa		8.36	□□□□□ -1.07
PSMC6-208	ENST00000554956	CILP	O75339	1184 aa		8.35	□□□□□ -1.07
PSMC6-208	ENST00000554956	FOSL1	P15407	271 aa		8.35	□□□□□ -1.07
PSMC6-208	ENST00000554956	SLBP	Q14493	270 aa	Known RBP eCLIP	8.35	□□□□□ -1.07
PSMC6-208	ENST00000554956	DUSP27	Q5VZP5	1158 aa		8.35	□□□□□ -1.07
PSMC6-208	ENST00000554956	ARMCX6	Q7L4S7	300 aa		8.35	□□□□□ -1.07
PSMC6-208	ENST00000554956	GATAD2B	Q8WXI9	593 aa		8.35	□□□□□ -1.07
PSMC6-208	ENST00000554956	MRRF	Q96E11	262 aa	Known RBP	8.35	□□□□□ -1.07
PSMC6-208	ENST00000554956	ZFP64	Q9NPA5	681 aa		8.35	□□□□□ -1.07
PSMC6-208	ENST00000554956	PCMTD2	Q9NV79	361 aa		8.35	□□□□□ -1.07
PSMC6-208	ENST00000554956	KIAA1522	Q9P206	1035 aa	Predicted RBP	8.35	□□□□□ -1.07
PSMC6-208	ENST00000554956	CORIN	Q9Y5Q5	1042 aa		8.35	□□□□□ -1.07
PSMC6-208	ENST00000554956	TLR3	O15455	904 aa	Known RBP	8.34	□□□□□ -1.07
PSMC6-208	ENST00000554956	CYP26A1	O43174	497 aa		8.34	□□□□□ -1.07
PSMC6-208	ENST00000554956	ZNF76	P36508	570 aa		8.34	□□□□□ -1.07
PSMC6-208	ENST00000554956	GRIK1	P39086	918 aa		8.34	□□□□□ -1.07
PSMC6-208	ENST00000554956	FANCC	Q00597	558 aa		8.34	□□□□□ -1.07
PSMC6-208	ENST00000554956	CYP27A1	Q02318	531 aa		8.34	□□□□□ -1.07
PSMC6-208	ENST00000554956	FBXL19	Q6PCT2	694 aa		8.34	□□□□□ -1.07
PSMC6-208	ENST00000554956	CCDC84	Q86UT8	332 aa	Predicted RBP	8.34	□□□□□ -1.07
PSMC6-208	ENST00000554956	FAM181A	Q8N9Y4	354 aa		8.34	□□□□□ -1.07
PSMC6-208	ENST00000554956	WDR7	Q9Y4E6	1490 aa		8.33	□□□□□ -1.08
PSMC6-208	ENST00000554956	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	8.33	□□□□□ -1.08
PSMC6-208	ENST00000554956	RBAK-RBAKDN	I3L0D1	243 aa		8.33	□□□□□ -1.08
PSMC6-208	ENST00000554956	BPNT1	O95861	308 aa		8.33	□□□□□ -1.08
PSMC6-208	ENST00000554956	EIF4A3	P38919	411 aa	Known RBP	8.33	□□□□□ -1.08
PSMC6-208	ENST00000554956	CPSF6	Q16630	551 aa	Known RBP eCLIP	8.33	□□□□□ -1.08
PSMC6-208	ENST00000554956	KCT2	Q8NC54	265 aa		8.33	□□□□□ -1.08
PSMC6-208	ENST00000554956	DPH2	Q9BQC3	489 aa	Predicted RBP	8.33	□□□□□ -1.08
PSMC6-208	ENST00000554956	PRDM10	Q9NQV6	1147 aa		8.33	□□□□□ -1.08
PSMC6-208	ENST00000554956	ADAMTS1	Q9UHI8	967 aa		8.33	□□□□□ -1.08
PSMC6-208	ENST00000554956	ADGRL1	O94910	1474 aa		8.32	□□□□□ -1.08
PSMC6-208	ENST00000554956	PGR	P06401	933 aa		8.32	□□□□□ -1.08
PSMC6-208	ENST00000554956	SPINK2	P20155	84 aa		8.32	□□□□□ -1.08
PSMC6-208	ENST00000554956	MSMP	Q1L6U9	139 aa		8.32	□□□□□ -1.08
PSMC6-208	ENST00000554956	CYP27C1	Q4G0S4	372 aa		8.32	□□□□□ -1.08
PSMC6-208	ENST00000554956	INTS5	Q6P9B9	1019 aa	Known RBP	8.32	□□□□□ -1.08
PSMC6-208	ENST00000554956	HID1	Q8IV36	788 aa		8.32	□□□□□ -1.08
PSMC6-208	ENST00000554956	XAGE3	Q8WTP9	111 aa		8.32	□□□□□ -1.08
PSMC6-208	ENST00000554956	ZNF428	Q96B54	188 aa		8.32	□□□□□ -1.08
PSMC6-208	ENST00000554956	TJP2	Q9UDY2	1190 aa		8.32	□□□□□ -1.08
PSMC6-208	ENST00000554956	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	8.32	□□□□□ -1.08
PSMC6-208	ENST00000554956	ZCCHC11	Q5TAX3	1644 aa	Known RBP	8.32	□□□□□ -1.08
PSMC6-208	ENST00000554956	GRIN3B	O60391	1043 aa		8.31	□□□□□ -1.08
PSMC6-208	ENST00000554956	ADAMTS4	O75173	837 aa		8.31	□□□□□ -1.08
PSMC6-208	ENST00000554956	LRIG2	O94898	1065 aa		8.31	□□□□□ -1.08
PSMC6-208	ENST00000554956	VAMP1	P23763	118 aa		8.31	□□□□□ -1.08

Retrieved 100 of 20,778 RNA–protein pairs in 14 ms