RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 USP17L21D6R901 530 aa13.5□□□□□ -0.25
XRCC3-208ENST00000554811 KIF5CO60282 957 aa13.5□□□□□ -0.25
XRCC3-208ENST00000554811 EVX2Q03828 476 aa13.5□□□□□ -0.25
XRCC3-208ENST00000554811 ENOX2Q16206 610 aaKnown RBP13.5□□□□□ -0.25
XRCC3-208ENST00000554811 TSR1Q2NL82 804 aaKnown RBP13.5□□□□□ -0.25
XRCC3-208ENST00000554811 VSTM4Q8IW00 320 aa13.5□□□□□ -0.25
XRCC3-208ENST00000554811 GPKOWQ92917 476 aaPredicted RBP eCLIP13.5□□□□□ -0.25
XRCC3-208ENST00000554811 CNNM2Q9H8M5 875 aa13.5□□□□□ -0.25
XRCC3-208ENST00000554811 GUCA1BQ9UMX6 200 aa13.5□□□□□ -0.25
XRCC3-208ENST00000554811 RGPD5Q99666 1765 aa13.49□□□□□ -0.25
XRCC3-208ENST00000554811 GSG1L2A8MUP6 293 aa13.49□□□□□ -0.25
XRCC3-208ENST00000554811 DEXIO95424 95 aa13.49□□□□□ -0.25
XRCC3-208ENST00000554811 MMP1P03956 469 aa13.49□□□□□ -0.25
XRCC3-208ENST00000554811 UBE3CQ15386 1083 aa13.49□□□□□ -0.25
XRCC3-208ENST00000554811 RESP18Q5W5W9 173 aa13.49□□□□□ -0.25
XRCC3-208ENST00000554811 WWC2Q6AWC2 1192 aa13.49□□□□□ -0.25
XRCC3-208ENST00000554811 ANKRD20A12PQ8NF67 263 aa13.49□□□□□ -0.25
XRCC3-208ENST00000554811 TEX13AQ9BXU3 409 aaPredicted RBP13.49□□□□□ -0.25
XRCC3-208ENST00000554811 CEP131Q9UPN4 1083 aa13.49□□□□□ -0.25
XRCC3-208ENST00000554811 LMAN1P49257 510 aa13.49□□□□□ -0.25
XRCC3-208ENST00000554811 RILPL1Q5EBL4 403 aa13.49□□□□□ -0.25
XRCC3-208ENST00000554811 ACRBPQ8NEB7 543 aa13.49□□□□□ -0.25
XRCC3-208ENST00000554811 SOS2Q07890 1332 aaPredicted RBP13.49□□□□□ -0.25
XRCC3-208ENST00000554811 SYNRGQ9UMZ2 1314 aa13.49□□□□□ -0.25
XRCC3-208ENST00000554811 CCDC152Q4G0S7 254 aa13.49□□□□□ -0.25
XRCC3-208ENST00000554811 SLF1Q9BQI6 1058 aa13.49□□□□□ -0.25
XRCC3-208ENST00000554811 TRIM34Q9BYJ4 488 aa13.49□□□□□ -0.25
XRCC3-208ENST00000554811 RNF41Q9H4P4 317 aaPredicted RBP13.49□□□□□ -0.25
XRCC3-208ENST00000554811 KIF13AQ9H1H9 1805 aa13.48□□□□□ -0.25
XRCC3-208ENST00000554811 VGLL3A8MV65 326 aa13.48□□□□□ -0.25
XRCC3-208ENST00000554811 AKR1B15C9JRZ8 316 aaPredicted RBP13.48□□□□□ -0.25
XRCC3-208ENST00000554811 ARHGAP6O43182 974 aa13.48□□□□□ -0.25
XRCC3-208ENST00000554811 BMP6P22004 513 aa13.48□□□□□ -0.25
XRCC3-208ENST00000554811 KRT2P35908 639 aa13.48□□□□□ -0.25
XRCC3-208ENST00000554811 CHRNDQ07001 517 aa13.48□□□□□ -0.25
XRCC3-208ENST00000554811 CAGE1Q8TC20 777 aa13.48□□□□□ -0.25
XRCC3-208ENST00000554811 CPVLQ9H3G5 476 aa13.48□□□□□ -0.25
XRCC3-208ENST00000554811 GNL3LQ9NVN8 582 aaKnown RBP13.48□□□□□ -0.25
XRCC3-208ENST00000554811 CCDC175P0C221 793 aa13.48□□□□□ -0.25
XRCC3-208ENST00000554811 CASP14P31944 242 aa13.48□□□□□ -0.25
XRCC3-208ENST00000554811 RBL2Q08999 1139 aa13.48□□□□□ -0.25
XRCC3-208ENST00000554811 PTPAQ15257 358 aa13.48□□□□□ -0.25
XRCC3-208ENST00000554811 CAVIN4Q5BKX8 364 aa13.48□□□□□ -0.25
XRCC3-208ENST00000554811 CDC5LQ99459 802 aaKnown RBP13.48□□□□□ -0.25
XRCC3-208ENST00000554811 FMNL1O95466 1100 aaPredicted RBP13.48□□□□□ -0.25
XRCC3-208ENST00000554811 TUBGCP6Q96RT7 1819 aa13.47□□□□□ -0.25
XRCC3-208ENST00000554811 RFX7Q2KHR2 1363 aa13.47□□□□□ -0.25
XRCC3-208ENST00000554811 KDM3BQ7LBC6 1761 aa13.47□□□□□ -0.25
XRCC3-208ENST00000554811 PPP6R2O75170 966 aa13.47□□□□□ -0.25
XRCC3-208ENST00000554811 TOB1P50616 345 aaPredicted RBP13.47□□□□□ -0.25
XRCC3-208ENST00000554811 PTGDRQ13258 359 aa13.47□□□□□ -0.25
XRCC3-208ENST00000554811 ARFGAP3Q9NP61 516 aa13.47□□□□□ -0.25
XRCC3-208ENST00000554811 TFR2Q9UP52 801 aa13.47□□□□□ -0.25
XRCC3-208ENST00000554811 JCADQ9P266 1359 aa13.47□□□□□ -0.25
XRCC3-208ENST00000554811 PSDA5PKW4 1024 aaPredicted RBP13.47□□□□□ -0.25
XRCC3-208ENST00000554811 PNMA6AP0CW24 399 aaPredicted RBP13.47□□□□□ -0.25
XRCC3-208ENST00000554811 CYP2D6P10635 497 aa13.47□□□□□ -0.25
XRCC3-208ENST00000554811 MATR3P43243 847 aaKnown RBP eCLIP13.47□□□□□ -0.25
XRCC3-208ENST00000554811 EIF5P55010 431 aaKnown RBP13.47□□□□□ -0.25
XRCC3-208ENST00000554811 ATP2B2Q01814 1243 aa13.47□□□□□ -0.25
XRCC3-208ENST00000554811 EARS2Q5JPH6 523 aaKnown RBP13.47□□□□□ -0.25
XRCC3-208ENST00000554811 CRACR2BQ8N4Y2 399 aaPredicted RBP13.47□□□□□ -0.25
XRCC3-208ENST00000554811 CARD10Q9BWT7 1032 aa13.47□□□□□ -0.25
XRCC3-208ENST00000554811 FAM217BQ9NTX9 383 aaPredicted RBP13.47□□□□□ -0.25
XRCC3-208ENST00000554811 IKBKBO14920 756 aa13.46□□□□□ -0.25
XRCC3-208ENST00000554811 USP5P45974 858 aa13.46□□□□□ -0.25
XRCC3-208ENST00000554811 NAP1L1P55209 391 aaKnown RBP13.46□□□□□ -0.25
XRCC3-208ENST00000554811 FAM182BQ5T319 152 aa13.46□□□□□ -0.25
XRCC3-208ENST00000554811 HEATR3Q7Z4Q2 680 aa13.46□□□□□ -0.25
XRCC3-208ENST00000554811 PLEKHA4Q9H4M7 779 aa13.46□□□□□ -0.25
XRCC3-208ENST00000554811 MCM9Q9NXL9 1143 aa13.46□□□□□ -0.25
XRCC3-208ENST00000554811 AFDNP55196 1824 aaKnown RBP13.46□□□□□ -0.25
XRCC3-208ENST00000554811 ENC1O14682 589 aa13.46□□□□□ -0.25
XRCC3-208ENST00000554811 MARCH6O60337 910 aa13.46□□□□□ -0.25
XRCC3-208ENST00000554811 IFNAR1P17181 557 aa13.46□□□□□ -0.25
XRCC3-208ENST00000554811 JAKMIP3Q5VZ66 844 aa13.46□□□□□ -0.25
XRCC3-208ENST00000554811 PSMB7Q99436 277 aa13.46□□□□□ -0.25
XRCC3-208ENST00000554811 RABEP2Q9H5N1 569 aa13.46□□□□□ -0.25
XRCC3-208ENST00000554811 MKNK2Q9HBH9 465 aa13.46□□□□□ -0.25
XRCC3-208ENST00000554811 ZNF446Q9NWS9 450 aa13.46□□□□□ -0.25
XRCC3-208ENST00000554811 SAP30BPQ9UHR5 308 aaKnown RBP13.46□□□□□ -0.25
XRCC3-208ENST00000554811 GOLGA8HP0CJ92 632 aa13.46□□□□□ -0.26
XRCC3-208ENST00000554811 OAS2P29728 719 aaKnown RBP13.46□□□□□ -0.26
XRCC3-208ENST00000554811 UBXN1Q04323 297 aa13.46□□□□□ -0.26
XRCC3-208ENST00000554811 TTC38Q5R3I4 469 aa13.46□□□□□ -0.26
XRCC3-208ENST00000554811 ANKRD18AQ8IVF6 992 aa13.46□□□□□ -0.26
XRCC3-208ENST00000554811 CPDO75976 1380 aa13.46□□□□□ -0.26
XRCC3-208ENST00000554811 CCDC66A2RUB6 948 aa13.45□□□□□ -0.26
XRCC3-208ENST00000554811 SSBP05455 408 aaKnown RBP eCLIP13.45□□□□□ -0.26
XRCC3-208ENST00000554811 TERF2Q15554 542 aa13.45□□□□□ -0.26
XRCC3-208ENST00000554811 SAMD1Q6SPF0 538 aaPredicted RBP13.45□□□□□ -0.26
XRCC3-208ENST00000554811 ADGRA1Q86SQ6 560 aa13.45□□□□□ -0.26
XRCC3-208ENST00000554811 DZIP1Q86YF9 867 aaKnown RBP13.45□□□□□ -0.26
XRCC3-208ENST00000554811 MRPL44Q9H9J2 332 aaKnown RBP13.45□□□□□ -0.26
XRCC3-208ENST00000554811 TXLNAP40222 546 aa13.45□□□□□ -0.26
XRCC3-208ENST00000554811 MRPS25P82663 173 aaKnown RBP13.45□□□□□ -0.26
XRCC3-208ENST00000554811 NTRK3Q16288 839 aa13.45□□□□□ -0.26
XRCC3-208ENST00000554811 MLKLQ8NB16 471 aa13.45□□□□□ -0.26
XRCC3-208ENST00000554811 MAP3K14Q99558 947 aa13.45□□□□□ -0.26
XRCC3-208ENST00000554811 TACC3Q9Y6A5 838 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms