RNA–Protein interactions for RNA: ENST00000554683.1

CNIH1-204, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 3

Gene CNIH1, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-204ENST00000554683 CCDC171Q6TFL3 1326 aa12.84□□□□□ -0.35
CNIH1-204ENST00000554683 POLR3DP05423 398 aaPredicted RBP12.83□□□□□ -0.36
CNIH1-204ENST00000554683 ZBTB48P10074 688 aaPredicted RBP12.83□□□□□ -0.36
CNIH1-204ENST00000554683 MAP2K2P36507 400 aa12.83□□□□□ -0.36
CNIH1-204ENST00000554683 SCYL3Q8IZE3 742 aa12.83□□□□□ -0.36
CNIH1-204ENST00000554683 CRACR2BQ8N4Y2 399 aaPredicted RBP12.83□□□□□ -0.36
CNIH1-204ENST00000554683 OPTNQ96CV9 577 aa12.83□□□□□ -0.36
CNIH1-204ENST00000554683 DIAPH3Q9NSV4 1193 aa12.83□□□□□ -0.36
CNIH1-204ENST00000554683 CYP2D7A0A087X1C5 515 aa12.82□□□□□ -0.36
CNIH1-204ENST00000554683 SMIM22K7EJ46 135 aa12.82□□□□□ -0.36
CNIH1-204ENST00000554683 HIP1O00291 1037 aa12.82□□□□□ -0.36
CNIH1-204ENST00000554683 MAP3K13O43283 966 aa12.82□□□□□ -0.36
CNIH1-204ENST00000554683 CTNND1O60716 968 aaKnown RBP12.82□□□□□ -0.36
CNIH1-204ENST00000554683 MKRN3Q13064 507 aaKnown RBP12.82□□□□□ -0.36
CNIH1-204ENST00000554683 SHROOM1Q2M3G4 852 aaPredicted RBP12.82□□□□□ -0.36
CNIH1-204ENST00000554683 MCMDC2Q4G0Z9 681 aa12.82□□□□□ -0.36
CNIH1-204ENST00000554683 BMP2KLQ5H9B9 411 aa12.82□□□□□ -0.36
CNIH1-204ENST00000554683 C12orf60Q5U649 245 aa12.82□□□□□ -0.36
CNIH1-204ENST00000554683 VPS53Q5VIR6 699 aa12.82□□□□□ -0.36
CNIH1-204ENST00000554683 TTC6Q86TZ1 520 aa12.82□□□□□ -0.36
CNIH1-204ENST00000554683 ERO1BQ86YB8 467 aa12.82□□□□□ -0.36
CNIH1-204ENST00000554683 FOXP4Q8IVH2 680 aaPredicted RBP12.82□□□□□ -0.36
CNIH1-204ENST00000554683 SLC10A4Q96EP9 437 aa12.82□□□□□ -0.36
CNIH1-204ENST00000554683 OTUD5Q96G74 571 aa12.82□□□□□ -0.36
CNIH1-204ENST00000554683 DDRGK1Q96HY6 314 aa12.82□□□□□ -0.36
CNIH1-204ENST00000554683 IL25Q9H293 177 aa12.82□□□□□ -0.36
CNIH1-204ENST00000554683 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.82□□□□□ -0.36
CNIH1-204ENST00000554683 PCDHB13Q9Y5F0 798 aa12.82□□□□□ -0.36
CNIH1-204ENST00000554683 ZMYM6O95789 1325 aa12.82□□□□□ -0.36
CNIH1-204ENST00000554683 PATL2C9JE40 543 aaKnown RBP12.81□□□□□ -0.36
CNIH1-204ENST00000554683 USP17L12C9JPN9 530 aa12.81□□□□□ -0.36
CNIH1-204ENST00000554683 USP17L21D6R901 530 aa12.81□□□□□ -0.36
CNIH1-204ENST00000554683 SHMT1P34896 483 aa12.81□□□□□ -0.36
CNIH1-204ENST00000554683 CAP2P40123 477 aa12.81□□□□□ -0.36
CNIH1-204ENST00000554683 TDO2P48775 406 aa12.81□□□□□ -0.36
CNIH1-204ENST00000554683 PPIL2Q13356 520 aa12.81□□□□□ -0.36
CNIH1-204ENST00000554683 SBK1Q52WX2 424 aa12.81□□□□□ -0.36
CNIH1-204ENST00000554683 TATDN1Q6P1N9 297 aa12.81□□□□□ -0.36
CNIH1-204ENST00000554683 CTR9Q6PD62 1173 aa12.81□□□□□ -0.36
CNIH1-204ENST00000554683 CWC27Q6UX04 472 aaKnown RBP12.81□□□□□ -0.36
CNIH1-204ENST00000554683 SLC44A5Q8NCS7 719 aa12.81□□□□□ -0.36
CNIH1-204ENST00000554683 TRIM34Q9BYJ4 488 aa12.81□□□□□ -0.36
CNIH1-204ENST00000554683 TAOK2Q9UL54 1235 aa12.81□□□□□ -0.36
CNIH1-204ENST00000554683 RAD50Q92878 1312 aa12.81□□□□□ -0.36
CNIH1-204ENST00000554683 PTPRAP18433 802 aa12.8□□□□□ -0.36
CNIH1-204ENST00000554683 JAG1P78504 1218 aa12.8□□□□□ -0.36
CNIH1-204ENST00000554683 KIF23Q02241 960 aaPredicted RBP12.8□□□□□ -0.36
CNIH1-204ENST00000554683 C16orf86Q6ZW13 317 aa12.8□□□□□ -0.36
CNIH1-204ENST00000554683 AMOTL1Q8IY63 956 aa12.8□□□□□ -0.36
CNIH1-204ENST00000554683 IFNL3Q8IZI9 196 aa12.8□□□□□ -0.36
CNIH1-204ENST00000554683 DYNLL2Q96FJ2 89 aa12.8□□□□□ -0.36
CNIH1-204ENST00000554683 RTN4Q9NQC3 1192 aaKnown RBP12.8□□□□□ -0.36
CNIH1-204ENST00000554683 PICK1Q9NRD5 415 aa12.8□□□□□ -0.36
CNIH1-204ENST00000554683 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.8□□□□□ -0.36
CNIH1-204ENST00000554683 ZBTB21Q9ULJ3 1066 aa12.8□□□□□ -0.36
CNIH1-204ENST00000554683 MYH4Q9Y623 1939 aa12.8□□□□□ -0.36
CNIH1-204ENST00000554683 IRF6O14896 467 aa12.79□□□□□ -0.36
CNIH1-204ENST00000554683 GABBR2O75899 941 aa12.79□□□□□ -0.36
CNIH1-204ENST00000554683 GDF11O95390 407 aa12.79□□□□□ -0.36
CNIH1-204ENST00000554683 CHMLP26374 656 aa12.79□□□□□ -0.36
CNIH1-204ENST00000554683 PPATQ06203 517 aa12.79□□□□□ -0.36
CNIH1-204ENST00000554683 CCDC84Q86UT8 332 aaPredicted RBP12.79□□□□□ -0.36
CNIH1-204ENST00000554683 MS4A4AQ96JQ5 239 aa12.79□□□□□ -0.36
CNIH1-204ENST00000554683 NACAP1Q9BZK3 213 aa12.79□□□□□ -0.36
CNIH1-204ENST00000554683 NAPBQ9H115 298 aa12.79□□□□□ -0.36
CNIH1-204ENST00000554683 SWAP70Q9UH65 585 aa12.79□□□□□ -0.36
CNIH1-204ENST00000554683 KCNH4Q9UQ05 1017 aa12.79□□□□□ -0.36
CNIH1-204ENST00000554683 TESPA1A2RU30 521 aaPredicted RBP12.78□□□□□ -0.36
CNIH1-204ENST00000554683 MANSC4A6NHS7 340 aaPredicted RBP12.78□□□□□ -0.36
CNIH1-204ENST00000554683 APPP05067 770 aa12.78□□□□□ -0.36
CNIH1-204ENST00000554683 ASNSP08243 561 aa12.78□□□□□ -0.36
CNIH1-204ENST00000554683 HSPD1P10809 573 aaKnown RBP12.78□□□□□ -0.36
CNIH1-204ENST00000554683 MFAP1P55081 439 aaKnown RBP12.78□□□□□ -0.36
CNIH1-204ENST00000554683 MAP2K1Q02750 393 aaPredicted RBP12.78□□□□□ -0.36
CNIH1-204ENST00000554683 SREBF2Q12772 1141 aa12.78□□□□□ -0.36
CNIH1-204ENST00000554683 ALX1Q15699 326 aa12.78□□□□□ -0.36
CNIH1-204ENST00000554683 GINM1Q9NU53 330 aa12.78□□□□□ -0.36
CNIH1-204ENST00000554683 WBP1LQ9NX94 342 aa12.78□□□□□ -0.36
CNIH1-204ENST00000554683 PARP14Q460N5 1801 aa12.78□□□□□ -0.36
CNIH1-204ENST00000554683 GH2P01242 217 aa12.77□□□□□ -0.37
CNIH1-204ENST00000554683 HSPA1AP0DMV8 641 aaKnown RBP12.77□□□□□ -0.37
CNIH1-204ENST00000554683 HSPA1BP0DMV9 641 aaKnown RBP12.77□□□□□ -0.37
CNIH1-204ENST00000554683 TM4SF4P48230 202 aa12.77□□□□□ -0.37
CNIH1-204ENST00000554683 CDK8P49336 464 aa12.77□□□□□ -0.37
CNIH1-204ENST00000554683 GTF2A2P52657 109 aa12.77□□□□□ -0.37
CNIH1-204ENST00000554683 PPARAQ07869 468 aa12.77□□□□□ -0.37
CNIH1-204ENST00000554683 SNAPC2Q13487 334 aa12.77□□□□□ -0.37
CNIH1-204ENST00000554683 CERKLQ49MI3 558 aaPredicted RBP12.77□□□□□ -0.37
CNIH1-204ENST00000554683 ZNF467Q7Z7K2 595 aaPredicted RBP12.77□□□□□ -0.37
CNIH1-204ENST00000554683 BRI3BPQ8WY22 251 aa12.77□□□□□ -0.37
CNIH1-204ENST00000554683 TBC1D2Q9BYX2 928 aa12.77□□□□□ -0.37
CNIH1-204ENST00000554683 AFG3L2Q9Y4W6 797 aa12.77□□□□□ -0.37
CNIH1-204ENST00000554683 PLIN4Q96Q06 1357 aa12.77□□□□□ -0.37
CNIH1-204ENST00000554683 A0A0G2JLL6 359 aaPredicted RBP12.76□□□□□ -0.37
CNIH1-204ENST00000554683 MINDY4BA8MYZ0 360 aa12.76□□□□□ -0.37
CNIH1-204ENST00000554683 IGF2BP3O00425 579 aaKnown RBP eCLIP12.76□□□□□ -0.37
CNIH1-204ENST00000554683 SGSM2O43147 1006 aa12.76□□□□□ -0.37
CNIH1-204ENST00000554683 GUCY1A2P33402 732 aa12.76□□□□□ -0.37
CNIH1-204ENST00000554683 MOGSQ13724 837 aa12.76□□□□□ -0.37
CNIH1-204ENST00000554683 ABCB5Q2M3G0 1257 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms