RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 B4DLN1 442 aa15.54■□□□□ 0.08
VTI1B-204ENST00000554659 ATP11AP98196 1134 aa15.54■□□□□ 0.08
VTI1B-204ENST00000554659 PLS1Q14651 629 aa15.53■□□□□ 0.08
VTI1B-204ENST00000554659 TEX11Q8IYF3 940 aa15.53■□□□□ 0.08
VTI1B-204ENST00000554659 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.53■□□□□ 0.08
VTI1B-204ENST00000554659 SLF1Q9BQI6 1058 aa15.53■□□□□ 0.08
VTI1B-204ENST00000554659 C19orf44Q9H6X5 657 aa15.53■□□□□ 0.08
VTI1B-204ENST00000554659 SLC52A2Q9HAB3 445 aa15.53■□□□□ 0.08
VTI1B-204ENST00000554659 GPT2Q8TD30 523 aa15.53■□□□□ 0.08
VTI1B-204ENST00000554659 LZTS2Q9BRK4 669 aa15.53■□□□□ 0.08
VTI1B-204ENST00000554659 TBX22Q9Y458 520 aa15.53■□□□□ 0.08
VTI1B-204ENST00000554659 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.53■□□□□ 0.08
VTI1B-204ENST00000554659 MTMR3Q13615 1198 aa15.53■□□□□ 0.08
VTI1B-204ENST00000554659 CABLES1Q8TDN4 633 aa15.53■□□□□ 0.08
VTI1B-204ENST00000554659 ZNF594Q96JF6 807 aaPredicted RBP15.53■□□□□ 0.08
VTI1B-204ENST00000554659 KDM5DQ9BY66 1539 aa15.53■□□□□ 0.08
VTI1B-204ENST00000554659 CIB2O75838 187 aa15.53■□□□□ 0.08
VTI1B-204ENST00000554659 PFKFB1P16118 471 aa15.53■□□□□ 0.08
VTI1B-204ENST00000554659 TXKP42681 527 aa15.53■□□□□ 0.08
VTI1B-204ENST00000554659 CLNS1AP54105 237 aaKnown RBP15.53■□□□□ 0.08
VTI1B-204ENST00000554659 NEDD9Q14511 834 aa15.53■□□□□ 0.08
VTI1B-204ENST00000554659 LGR6Q9HBX8 967 aa15.53■□□□□ 0.08
VTI1B-204ENST00000554659 ERCC5P28715 1186 aaPredicted RBP15.53■□□□□ 0.08
VTI1B-204ENST00000554659 EIF4A1P60842 406 aaKnown RBP15.53■□□□□ 0.08
VTI1B-204ENST00000554659 PNOCQ13519 176 aa15.53■□□□□ 0.08
VTI1B-204ENST00000554659 SPATA31E1Q6ZUB1 1445 aa15.53■□□□□ 0.08
VTI1B-204ENST00000554659 LMNTD2Q8IXW0 634 aa15.53■□□□□ 0.08
VTI1B-204ENST00000554659 LRWD1Q9UFC0 647 aa15.53■□□□□ 0.08
VTI1B-204ENST00000554659 PFKFB2O60825 505 aa15.52■□□□□ 0.08
VTI1B-204ENST00000554659 NR1I2O75469 434 aa15.52■□□□□ 0.08
VTI1B-204ENST00000554659 INF2Q27J81 1249 aa15.52■□□□□ 0.08
VTI1B-204ENST00000554659 WDR44Q5JSH3 913 aa15.52■□□□□ 0.08
VTI1B-204ENST00000554659 SYCE1Q8N0S2 351 aa15.52■□□□□ 0.08
VTI1B-204ENST00000554659 MYL10Q9BUA6 226 aa15.52■□□□□ 0.08
VTI1B-204ENST00000554659 RABEP2Q9H5N1 569 aa15.52■□□□□ 0.08
VTI1B-204ENST00000554659 RTCBQ9Y3I0 505 aaKnown RBP15.52■□□□□ 0.08
VTI1B-204ENST00000554659 FAM169AQ9Y6X4 670 aa15.52■□□□□ 0.08
VTI1B-204ENST00000554659 HIBADHP31937 336 aaKnown RBP15.52■□□□□ 0.08
VTI1B-204ENST00000554659 CACNA2D3Q8IZS8 1091 aa15.52■□□□□ 0.08
VTI1B-204ENST00000554659 CCDC14Q49A88 953 aa15.52■□□□□ 0.07
VTI1B-204ENST00000554659 TAOK1Q7L7X3 1001 aa15.52■□□□□ 0.07
VTI1B-204ENST00000554659 KDM5AP29375 1690 aaKnown RBP15.52■□□□□ 0.07
VTI1B-204ENST00000554659 FYB2Q5VWT5 728 aa15.52■□□□□ 0.07
VTI1B-204ENST00000554659 DPH6Q7L8W6 267 aa15.52■□□□□ 0.07
VTI1B-204ENST00000554659 TRMT44Q8IYL2 757 aaKnown RBP15.52■□□□□ 0.07
VTI1B-204ENST00000554659 CTDSPL2Q05D32 466 aa15.51■□□□□ 0.07
VTI1B-204ENST00000554659 EYA3Q99504 573 aa15.51■□□□□ 0.07
VTI1B-204ENST00000554659 SERTAD1Q9UHV2 236 aa15.51■□□□□ 0.07
VTI1B-204ENST00000554659 PALD1Q9ULE6 856 aa15.51■□□□□ 0.07
VTI1B-204ENST00000554659 KCNJ14Q9UNX9 436 aa15.51■□□□□ 0.07
VTI1B-204ENST00000554659 KIF3CO14782 793 aa15.51■□□□□ 0.07
VTI1B-204ENST00000554659 FLOT1O75955 427 aa15.51■□□□□ 0.07
VTI1B-204ENST00000554659 SND1Q7KZF4 910 aaKnown RBP eCLIP15.51■□□□□ 0.07
VTI1B-204ENST00000554659 CEP104O60308 925 aa15.51■□□□□ 0.07
VTI1B-204ENST00000554659 LONRF3Q496Y0 759 aa15.51■□□□□ 0.07
VTI1B-204ENST00000554659 ZNF365Q70YC5 407 aa15.51■□□□□ 0.07
VTI1B-204ENST00000554659 SNX29Q8TEQ0 813 aa15.51■□□□□ 0.07
VTI1B-204ENST00000554659 SAR1BQ9Y6B6 198 aa15.51■□□□□ 0.07
VTI1B-204ENST00000554659 MROH5Q6ZUA9 1318 aa15.51■□□□□ 0.07
VTI1B-204ENST00000554659 ZNF532Q9HCE3 1301 aa15.51■□□□□ 0.07
VTI1B-204ENST00000554659 EFCAB8A8MWE9 144 aa15.51■□□□□ 0.07
VTI1B-204ENST00000554659 ZAP70P43403 619 aa15.51■□□□□ 0.07
VTI1B-204ENST00000554659 RNASE9P60153 205 aaKnown RBP15.51■□□□□ 0.07
VTI1B-204ENST00000554659 CEP85LQ5SZL2 805 aa15.51■□□□□ 0.07
VTI1B-204ENST00000554659 BEND3Q5T5X7 828 aa15.51■□□□□ 0.07
VTI1B-204ENST00000554659 LRRC8AQ8IWT6 810 aa15.51■□□□□ 0.07
VTI1B-204ENST00000554659 TRMT2AQ8IZ69 625 aaKnown RBP15.51■□□□□ 0.07
VTI1B-204ENST00000554659 TRIML1Q8N9V2 468 aa15.51■□□□□ 0.07
VTI1B-204ENST00000554659 USP44Q9H0E7 712 aa15.51■□□□□ 0.07
VTI1B-204ENST00000554659 GPCPD1Q9NPB8 672 aa15.51■□□□□ 0.07
VTI1B-204ENST00000554659 TPCN1Q9ULQ1 816 aa15.51■□□□□ 0.07
VTI1B-204ENST00000554659 KRT5P13647 590 aa15.5■□□□□ 0.07
VTI1B-204ENST00000554659 UAP1Q16222 522 aaPredicted RBP15.5■□□□□ 0.07
VTI1B-204ENST00000554659 SPATA5Q8NB90 893 aa15.5■□□□□ 0.07
VTI1B-204ENST00000554659 USP28Q96RU2 1077 aa15.5■□□□□ 0.07
VTI1B-204ENST00000554659 SH2D4AQ9H788 454 aa15.5■□□□□ 0.07
VTI1B-204ENST00000554659 BUB1BO60566 1050 aaPredicted RBP15.5■□□□□ 0.07
VTI1B-204ENST00000554659 CMA1P23946 247 aa15.5■□□□□ 0.07
VTI1B-204ENST00000554659 PTH1RQ03431 593 aa15.5■□□□□ 0.07
VTI1B-204ENST00000554659 KLHL30Q0D2K2 578 aa15.5■□□□□ 0.07
VTI1B-204ENST00000554659 RPS6KA1Q15418 735 aa15.5■□□□□ 0.07
VTI1B-204ENST00000554659 SFMBT2Q5VUG0 894 aa15.5■□□□□ 0.07
VTI1B-204ENST00000554659 MAK16Q9BXY0 300 aaKnown RBP15.5■□□□□ 0.07
VTI1B-204ENST00000554659 SAP30BPQ9UHR5 308 aaKnown RBP15.5■□□□□ 0.07
VTI1B-204ENST00000554659 ZBTB21Q9ULJ3 1066 aa15.5■□□□□ 0.07
VTI1B-204ENST00000554659 HGSO14964 777 aaPredicted RBP15.5■□□□□ 0.07
VTI1B-204ENST00000554659 PRDM1O75626 825 aa15.5■□□□□ 0.07
VTI1B-204ENST00000554659 RFC1P35251 1148 aaPredicted RBP15.5■□□□□ 0.07
VTI1B-204ENST00000554659 ADCY7P51828 1080 aa15.5■□□□□ 0.07
VTI1B-204ENST00000554659 NBPF14Q5TI25 921 aa15.5■□□□□ 0.07
VTI1B-204ENST00000554659 LIN9Q5TKA1 542 aa15.5■□□□□ 0.07
VTI1B-204ENST00000554659 CABP7Q86V35 215 aa15.5■□□□□ 0.07
VTI1B-204ENST00000554659 FAM212AQ96EL1 285 aa15.5■□□□□ 0.07
VTI1B-204ENST00000554659 FNBP1Q96RU3 617 aa15.5■□□□□ 0.07
VTI1B-204ENST00000554659 IFIH1Q9BYX4 1025 aaKnown RBP15.5■□□□□ 0.07
VTI1B-204ENST00000554659 KCNA6P17658 529 aa15.5■□□□□ 0.07
VTI1B-204ENST00000554659 SMTNP53814 917 aa15.5■□□□□ 0.07
VTI1B-204ENST00000554659 ADKP55263 362 aaKnown RBP15.5■□□□□ 0.07
VTI1B-204ENST00000554659 RBM6P78332 1123 aaKnown RBP15.5■□□□□ 0.07
VTI1B-204ENST00000554659 CABS1Q96KC9 395 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms