RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 TRIM32Q13049 653 aa29.66■■■□□ 2.34
FOXA1-204ENST00000554607 TRMT44Q8IYL2 757 aaKnown RBP29.66■■■□□ 2.34
FOXA1-204ENST00000554607 GTF3C2Q8WUA4 911 aaPredicted RBP29.66■■■□□ 2.34
FOXA1-204ENST00000554607 TRIB2Q92519 343 aa29.66■■■□□ 2.34
FOXA1-204ENST00000554607 CLUAP1Q96AJ1 413 aa29.66■■■□□ 2.34
FOXA1-204ENST00000554607 ZNF512BQ96KM6 892 aaPredicted RBP29.66■■■□□ 2.34
FOXA1-204ENST00000554607 CCER2I3L3R5 266 aa29.65■■■□□ 2.34
FOXA1-204ENST00000554607 BCAR3O75815 825 aa29.65■■■□□ 2.34
FOXA1-204ENST00000554607 HLA-DOAP06340 250 aa29.65■■■□□ 2.34
FOXA1-204ENST00000554607 BMP8BP34820 402 aa29.65■■■□□ 2.34
FOXA1-204ENST00000554607 C7orf61Q8IZ16 206 aa29.65■■■□□ 2.34
FOXA1-204ENST00000554607 DBNDD2Q9BQY9 259 aa29.65■■■□□ 2.34
FOXA1-204ENST00000554607 DNAJC18Q9H819 358 aa29.65■■■□□ 2.34
FOXA1-204ENST00000554607 OGDHLQ9ULD0 1010 aa29.65■■■□□ 2.34
FOXA1-204ENST00000554607 CYP2E1P05181 493 aaPredicted RBP29.64■■■□□ 2.34
FOXA1-204ENST00000554607 MAPK4P31152 587 aa29.64■■■□□ 2.34
FOXA1-204ENST00000554607 POLA2Q14181 598 aa29.64■■■□□ 2.34
FOXA1-204ENST00000554607 PDE3AQ14432 1141 aa29.64■■■□□ 2.34
FOXA1-204ENST00000554607 CCAR1Q8IX12 1150 aaKnown RBP29.64■■■□□ 2.34
FOXA1-204ENST00000554607 GDF15Q99988 308 aa29.64■■■□□ 2.34
FOXA1-204ENST00000554607 C11orf49Q9H6J7 331 aa29.64■■■□□ 2.34
FOXA1-204ENST00000554607 PALD1Q9ULE6 856 aa29.64■■■□□ 2.34
FOXA1-204ENST00000554607 TNNQ9UQP3 1299 aa29.64■■■□□ 2.34
FOXA1-204ENST00000554607 JAG1P78504 1218 aa29.63■■■□□ 2.33
FOXA1-204ENST00000554607 MAP3K21Q5TCX8 1036 aa29.63■■■□□ 2.33
FOXA1-204ENST00000554607 ADGRA1Q86SQ6 560 aa29.63■■■□□ 2.33
FOXA1-204ENST00000554607 TXNRD2Q9NNW7 524 aa29.63■■■□□ 2.33
FOXA1-204ENST00000554607 ZBTB21Q9ULJ3 1066 aa29.63■■■□□ 2.33
FOXA1-204ENST00000554607 MAST2Q6P0Q8 1798 aa29.62■■■□□ 2.33
FOXA1-204ENST00000554607 SIPA1L1O43166 1804 aa29.62■■■□□ 2.33
FOXA1-204ENST00000554607 GDF11O95390 407 aa29.62■■■□□ 2.33
FOXA1-204ENST00000554607 PRKAR2AP13861 404 aaKnown RBP29.62■■■□□ 2.33
FOXA1-204ENST00000554607 ATP8B2P98198 1209 aa29.62■■■□□ 2.33
FOXA1-204ENST00000554607 SSH3Q8TE77 659 aa29.62■■■□□ 2.33
FOXA1-204ENST00000554607 RBPJLQ9UBG7 517 aa29.62■■■□□ 2.33
FOXA1-204ENST00000554607 ALPK3Q96L96 1907 aa29.62■■■□□ 2.33
FOXA1-204ENST00000554607 SOX1O00570 391 aaPredicted RBP29.61■■■□□ 2.33
FOXA1-204ENST00000554607 SURF6O75683 361 aaKnown RBP29.61■■■□□ 2.33
FOXA1-204ENST00000554607 MNX1P50219 401 aaPredicted RBP29.61■■■□□ 2.33
FOXA1-204ENST00000554607 USP17L2Q6R6M4 530 aa29.61■■■□□ 2.33
FOXA1-204ENST00000554607 CERS3Q8IU89 383 aa29.61■■■□□ 2.33
FOXA1-204ENST00000554607 PLXNB2O15031 1838 aa29.61■■■□□ 2.33
FOXA1-204ENST00000554607 ZAP70P43403 619 aa29.6■■■□□ 2.33
FOXA1-204ENST00000554607 ERVK-9P63128 1117 aa29.6■■■□□ 2.33
FOXA1-204ENST00000554607 ERVK-24P63145 666 aa29.6■■■□□ 2.33
FOXA1-204ENST00000554607 ZKSCAN2Q63HK3 967 aa29.6■■■□□ 2.33
FOXA1-204ENST00000554607 TMEM57Q8N5G2 664 aa29.6■■■□□ 2.33
FOXA1-204ENST00000554607 SAP30BPQ9UHR5 308 aaKnown RBP29.6■■■□□ 2.33
FOXA1-204ENST00000554607 ZMYND8Q9ULU4 1186 aaPredicted RBP29.6■■■□□ 2.33
FOXA1-204ENST00000554607 ZKSCAN1P17029 563 aaPredicted RBP29.59■■■□□ 2.33
FOXA1-204ENST00000554607 RGS2P41220 211 aa29.59■■■□□ 2.33
FOXA1-204ENST00000554607 LRCH3Q96II8 777 aa29.59■■■□□ 2.33
FOXA1-204ENST00000554607 CYP7A1P22680 504 aa29.58■■■□□ 2.33
FOXA1-204ENST00000554607 Q3C1V9 767 aa29.58■■■□□ 2.33
FOXA1-204ENST00000554607 FOCADQ5VW36 1801 aa29.58■■■□□ 2.33
FOXA1-204ENST00000554607 GPR153Q6NV75 609 aa29.58■■■□□ 2.33
FOXA1-204ENST00000554607 SLC17A8Q8NDX2 589 aa29.58■■■□□ 2.33
FOXA1-204ENST00000554607 PIH1D3Q9NQM4 214 aaKnown RBP29.58■■■□□ 2.33
FOXA1-204ENST00000554607 EMILIN3Q9NT22 766 aa29.58■■■□□ 2.33
FOXA1-204ENST00000554607 CDK5RAP2Q96SN8 1893 aa29.57■■■□□ 2.32
FOXA1-204ENST00000554607 PEX10O60683 326 aa29.57■■■□□ 2.32
FOXA1-204ENST00000554607 SHROOM1Q2M3G4 852 aaPredicted RBP29.57■■■□□ 2.32
FOXA1-204ENST00000554607 GPR142Q7Z601 462 aa29.57■■■□□ 2.32
FOXA1-204ENST00000554607 PLEKHH3Q7Z736 793 aa29.57■■■□□ 2.32
FOXA1-204ENST00000554607 USP6NLQ92738 828 aa29.57■■■□□ 2.32
FOXA1-204ENST00000554607 PAGR1Q9BTK6 254 aa29.57■■■□□ 2.32
FOXA1-204ENST00000554607 DYNLL1P63167 89 aaKnown RBP29.56■■■□□ 2.32
FOXA1-204ENST00000554607 CACNB2Q08289 660 aaPredicted RBP29.56■■■□□ 2.32
FOXA1-204ENST00000554607 CWC22Q9HCG8 908 aaKnown RBP29.56■■■□□ 2.32
FOXA1-204ENST00000554607 NOP58Q9Y2X3 529 aaKnown RBP29.56■■■□□ 2.32
FOXA1-204ENST00000554607 DDX60LQ5H9U9 1706 aaKnown RBP29.56■■■□□ 2.32
FOXA1-204ENST00000554607 GH2P01242 217 aa29.55■■■□□ 2.32
FOXA1-204ENST00000554607 USP5P45974 858 aa29.55■■■□□ 2.32
FOXA1-204ENST00000554607 MORN1Q5T089 497 aa29.55■■■□□ 2.32
FOXA1-204ENST00000554607 TMED8Q6PL24 325 aaPredicted RBP29.55■■■□□ 2.32
FOXA1-204ENST00000554607 PORCNQ9H237 461 aa29.55■■■□□ 2.32
FOXA1-204ENST00000554607 DBNLQ9UJU6 430 aaKnown RBP29.55■■■□□ 2.32
FOXA1-204ENST00000554607 RABGAP1Q9Y3P9 1069 aa29.55■■■□□ 2.32
FOXA1-204ENST00000554607 USP17L15C9J2P7 530 aa29.54■■■□□ 2.32
FOXA1-204ENST00000554607 USP17L13C9JLJ4 530 aa29.54■■■□□ 2.32
FOXA1-204ENST00000554607 USP17L11C9JVI0 530 aa29.54■■■□□ 2.32
FOXA1-204ENST00000554607 USP17L18D6R9N7 530 aa29.54■■■□□ 2.32
FOXA1-204ENST00000554607 USP17L22D6RA61 530 aa29.54■■■□□ 2.32
FOXA1-204ENST00000554607 USP17L17D6RBQ6 530 aa29.54■■■□□ 2.32
FOXA1-204ENST00000554607 USP17L19D6RCP7 530 aa29.54■■■□□ 2.32
FOXA1-204ENST00000554607 USP17L20D6RJB6 530 aa29.54■■■□□ 2.32
FOXA1-204ENST00000554607 GLRX3O76003 335 aaKnown RBP29.54■■■□□ 2.32
FOXA1-204ENST00000554607 CCNA1P78396 465 aa29.54■■■□□ 2.32
FOXA1-204ENST00000554607 USP17L24Q0WX57 530 aa29.54■■■□□ 2.32
FOXA1-204ENST00000554607 TATDN1Q6P1N9 297 aa29.54■■■□□ 2.32
FOXA1-204ENST00000554607 C12orf42Q96LP6 360 aa29.54■■■□□ 2.32
FOXA1-204ENST00000554607 FEZ1Q99689 392 aa29.54■■■□□ 2.32
FOXA1-204ENST00000554607 APBA2Q99767 749 aa29.54■■■□□ 2.32
FOXA1-204ENST00000554607 LAMA3Q16787 3333 aa29.54■■■□□ 2.32
FOXA1-204ENST00000554607 IDH1O75874 414 aaKnown RBP29.53■■■□□ 2.32
FOXA1-204ENST00000554607 SYN1P17600 705 aa29.53■■■□□ 2.32
FOXA1-204ENST00000554607 USP14P54578 494 aa29.53■■■□□ 2.32
FOXA1-204ENST00000554607 EHD4Q9H223 541 aa29.53■■■□□ 2.32
FOXA1-204ENST00000554607 SERPINB13Q9UIV8 391 aa29.53■■■□□ 2.32
FOXA1-204ENST00000554607 MAGEA10P43363 369 aaPredicted RBP29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms