RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 ZNF280CQ8ND82 737 aa12.84□□□□□ -0.35
SHMT2-213ENST00000554600 PARK7Q99497 189 aaKnown RBP12.84□□□□□ -0.35
SHMT2-213ENST00000554600 EFCC1Q9HA90 598 aa12.84□□□□□ -0.35
SHMT2-213ENST00000554600 DCP1AQ9NPI6 582 aaPredicted RBP12.84□□□□□ -0.35
SHMT2-213ENST00000554600 CPA4Q9UI42 421 aa12.84□□□□□ -0.35
SHMT2-213ENST00000554600 ZBTB21Q9ULJ3 1066 aa12.84□□□□□ -0.35
SHMT2-213ENST00000554600 RNF113AO15541 343 aaKnown RBP12.83□□□□□ -0.36
SHMT2-213ENST00000554600 PLCD1P51178 756 aa12.83□□□□□ -0.36
SHMT2-213ENST00000554600 HMGCS2P54868 508 aa12.83□□□□□ -0.36
SHMT2-213ENST00000554600 MOGSQ13724 837 aa12.83□□□□□ -0.36
SHMT2-213ENST00000554600 ARHGEF6Q15052 776 aa12.83□□□□□ -0.36
SHMT2-213ENST00000554600 SHROOM1Q2M3G4 852 aaPredicted RBP12.83□□□□□ -0.36
SHMT2-213ENST00000554600 LRRFIP1Q32MZ4 808 aaKnown RBP12.83□□□□□ -0.36
SHMT2-213ENST00000554600 GPAT2Q6NUI2 795 aa12.83□□□□□ -0.36
SHMT2-213ENST00000554600 FSD1Q9BTV5 496 aa12.83□□□□□ -0.36
SHMT2-213ENST00000554600 TBC1D2Q9BYX2 928 aa12.83□□□□□ -0.36
SHMT2-213ENST00000554600 LNPKQ9C0E8 428 aa12.83□□□□□ -0.36
SHMT2-213ENST00000554600 PUS7LQ9H0K6 701 aaKnown RBP12.83□□□□□ -0.36
SHMT2-213ENST00000554600 EHD4Q9H223 541 aa12.83□□□□□ -0.36
SHMT2-213ENST00000554600 SLC4A4Q9Y6R1 1079 aa12.83□□□□□ -0.36
SHMT2-213ENST00000554600 MYH4Q9Y623 1939 aa12.82□□□□□ -0.36
SHMT2-213ENST00000554600 MPHOSPH10O00566 681 aaKnown RBP12.82□□□□□ -0.36
SHMT2-213ENST00000554600 GH2P01242 217 aa12.82□□□□□ -0.36
SHMT2-213ENST00000554600 CYP2C8P10632 490 aa12.82□□□□□ -0.36
SHMT2-213ENST00000554600 CYP2D6P10635 497 aa12.82□□□□□ -0.36
SHMT2-213ENST00000554600 JAG1P78504 1218 aa12.82□□□□□ -0.36
SHMT2-213ENST00000554600 RAB3GAP1Q15042 981 aa12.82□□□□□ -0.36
SHMT2-213ENST00000554600 ABCB5Q2M3G0 1257 aa12.82□□□□□ -0.36
SHMT2-213ENST00000554600 CERKLQ49MI3 558 aaPredicted RBP12.82□□□□□ -0.36
SHMT2-213ENST00000554600 FBXO46Q6PJ61 603 aaPredicted RBP12.82□□□□□ -0.36
SHMT2-213ENST00000554600 OTOP1Q7RTM1 612 aa12.82□□□□□ -0.36
SHMT2-213ENST00000554600 METTL16Q86W50 562 aaKnown RBP12.82□□□□□ -0.36
SHMT2-213ENST00000554600 PI4K2BQ8TCG2 481 aa12.82□□□□□ -0.36
SHMT2-213ENST00000554600 SMCR8Q8TEV9 937 aaPredicted RBP12.82□□□□□ -0.36
SHMT2-213ENST00000554600 CABP5Q9NP86 173 aa12.82□□□□□ -0.36
SHMT2-213ENST00000554600 ATP8A2Q9NTI2 1148 aa12.82□□□□□ -0.36
SHMT2-213ENST00000554600 GINM1Q9NU53 330 aa12.82□□□□□ -0.36
SHMT2-213ENST00000554600 TMOD4Q9NZQ9 345 aa12.82□□□□□ -0.36
SHMT2-213ENST00000554600 HPS5Q9UPZ3 1129 aa12.82□□□□□ -0.36
SHMT2-213ENST00000554600 PDE4DIPQ5VU43 2346 aa12.81□□□□□ -0.36
SHMT2-213ENST00000554600 ZFYP08048 801 aaPredicted RBP12.81□□□□□ -0.36
SHMT2-213ENST00000554600 MTMR2Q13614 643 aa12.81□□□□□ -0.36
SHMT2-213ENST00000554600 TREML2Q5T2D2 321 aa12.81□□□□□ -0.36
SHMT2-213ENST00000554600 PROCA1Q8NCQ7 364 aaPredicted RBP12.81□□□□□ -0.36
SHMT2-213ENST00000554600 APPBP2Q92624 585 aa12.81□□□□□ -0.36
SHMT2-213ENST00000554600 FEZ1Q99689 392 aa12.81□□□□□ -0.36
SHMT2-213ENST00000554600 AGTPBP1Q9UPW5 1226 aa12.81□□□□□ -0.36
SHMT2-213ENST00000554600 CYP2D7A0A087X1C5 515 aa12.8□□□□□ -0.36
SHMT2-213ENST00000554600 USP17L10C9JJH3 530 aa12.8□□□□□ -0.36
SHMT2-213ENST00000554600 USP17L12C9JPN9 530 aa12.8□□□□□ -0.36
SHMT2-213ENST00000554600 USP17L21D6R901 530 aa12.8□□□□□ -0.36
SHMT2-213ENST00000554600 IGHDP01880 384 aa12.8□□□□□ -0.36
SHMT2-213ENST00000554600 APPP05067 770 aa12.8□□□□□ -0.36
SHMT2-213ENST00000554600 SHMT1P34896 483 aa12.8□□□□□ -0.36
SHMT2-213ENST00000554600 PDE1AP54750 535 aa12.8□□□□□ -0.36
SHMT2-213ENST00000554600 BACE1P56817 501 aa12.8□□□□□ -0.36
SHMT2-213ENST00000554600 LACTBP83111 547 aaPredicted RBP12.8□□□□□ -0.36
SHMT2-213ENST00000554600 EVX2Q03828 476 aa12.8□□□□□ -0.36
SHMT2-213ENST00000554600 PABPC4Q13310 644 aaKnown RBP eCLIP12.8□□□□□ -0.36
SHMT2-213ENST00000554600 TATDN1Q6P1N9 297 aa12.8□□□□□ -0.36
SHMT2-213ENST00000554600 C17orf99Q6UX52 265 aa12.8□□□□□ -0.36
SHMT2-213ENST00000554600 DYNLL2Q96FJ2 89 aa12.8□□□□□ -0.36
SHMT2-213ENST00000554600 WDR18Q9BV38 432 aa12.8□□□□□ -0.36
SHMT2-213ENST00000554600 PNMA3Q9UL41 463 aa12.8□□□□□ -0.36
SHMT2-213ENST00000554600 GPAA1O43292 621 aa12.79□□□□□ -0.36
SHMT2-213ENST00000554600 FMNL1O95466 1100 aaPredicted RBP12.79□□□□□ -0.36
SHMT2-213ENST00000554600 OSBPP22059 807 aa12.79□□□□□ -0.36
SHMT2-213ENST00000554600 ZYXQ15942 572 aaKnown RBP12.79□□□□□ -0.36
SHMT2-213ENST00000554600 SMC5Q8IY18 1101 aa12.79□□□□□ -0.36
SHMT2-213ENST00000554600 SLC44A5Q8NCS7 719 aa12.79□□□□□ -0.36
SHMT2-213ENST00000554600 OSBP2Q969R2 916 aa12.79□□□□□ -0.36
SHMT2-213ENST00000554600 STRBPQ96SI9 672 aaKnown RBP12.79□□□□□ -0.36
SHMT2-213ENST00000554600 ARHGAP39Q9C0H5 1083 aa12.79□□□□□ -0.36
SHMT2-213ENST00000554600 SLC45A1Q9Y2W3 748 aa12.79□□□□□ -0.36
SHMT2-213ENST00000554600 ADGRA2Q96PE1 1338 aa12.79□□□□□ -0.36
SHMT2-213ENST00000554600 MINDY4BA8MYZ0 360 aa12.78□□□□□ -0.36
SHMT2-213ENST00000554600 TRIM6-TRIM34B2RNG4 842 aa12.78□□□□□ -0.36
SHMT2-213ENST00000554600 C19orf81C9J6K1 198 aa12.78□□□□□ -0.36
SHMT2-213ENST00000554600 M0R2C6 588 aa12.78□□□□□ -0.36
SHMT2-213ENST00000554600 PSMC4P43686 418 aa12.78□□□□□ -0.36
SHMT2-213ENST00000554600 TDO2P48775 406 aa12.78□□□□□ -0.36
SHMT2-213ENST00000554600 SOX10P56693 466 aa12.78□□□□□ -0.36
SHMT2-213ENST00000554600 IRX3P78415 501 aaPredicted RBP12.78□□□□□ -0.36
SHMT2-213ENST00000554600 CAP1Q01518 475 aa12.78□□□□□ -0.36
SHMT2-213ENST00000554600 GABPAQ06546 454 aa12.78□□□□□ -0.36
SHMT2-213ENST00000554600 SH3D19Q5HYK7 790 aa12.78□□□□□ -0.36
SHMT2-213ENST00000554600 CHD1LQ86WJ1 897 aa12.78□□□□□ -0.36
SHMT2-213ENST00000554600 STK11IPQ8N1F8 1099 aa12.78□□□□□ -0.36
SHMT2-213ENST00000554600 STAP2Q9UGK3 403 aa12.78□□□□□ -0.36
SHMT2-213ENST00000554600 SWAP70Q9UH65 585 aa12.78□□□□□ -0.36
SHMT2-213ENST00000554600 PTPN22Q9Y2R2 807 aa12.78□□□□□ -0.36
SHMT2-213ENST00000554600 SALL3Q9BXA9 1300 aa12.78□□□□□ -0.36
SHMT2-213ENST00000554600 BCRP11274 1271 aa12.77□□□□□ -0.37
SHMT2-213ENST00000554600 GNAT2P19087 354 aa12.77□□□□□ -0.37
SHMT2-213ENST00000554600 CDK8P49336 464 aa12.77□□□□□ -0.37
SHMT2-213ENST00000554600 SEPT2Q15019 361 aa12.77□□□□□ -0.37
SHMT2-213ENST00000554600 C12orf60Q5U649 245 aa12.77□□□□□ -0.37
SHMT2-213ENST00000554600 CTR9Q6PD62 1173 aa12.77□□□□□ -0.37
SHMT2-213ENST00000554600 USP17L2Q6R6M4 530 aa12.77□□□□□ -0.37
SHMT2-213ENST00000554600 EVI5LQ96CN4 794 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms