RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 ACPPP15309 386 aa6.91□□□□□ -1.3
ATXN3-228ENST00000554592 PCSK2P16519 638 aa6.91□□□□□ -1.3
ATXN3-228ENST00000554592 MBTPS1Q14703 1052 aa6.91□□□□□ -1.3
ATXN3-228ENST00000554592 NPM2Q86SE8 214 aaKnown RBP6.91□□□□□ -1.3
ATXN3-228ENST00000554592 COL23A1Q86Y22 540 aaPredicted RBP6.91□□□□□ -1.3
ATXN3-228ENST00000554592 IL22RA1Q8N6P7 574 aa6.91□□□□□ -1.3
ATXN3-228ENST00000554592 PBX4Q9BYU1 374 aa6.91□□□□□ -1.3
ATXN3-228ENST00000554592 RBSNQ9H1K0 784 aa6.91□□□□□ -1.3
ATXN3-228ENST00000554592 TNS2Q63HR2 1409 aa6.91□□□□□ -1.3
ATXN3-228ENST00000554592 SLIT3O75094 1523 aa6.91□□□□□ -1.3
ATXN3-228ENST00000554592 TNFRSF21O75509 655 aa6.9□□□□□ -1.3
ATXN3-228ENST00000554592 FURINP09958 794 aa6.9□□□□□ -1.3
ATXN3-228ENST00000554592 ITGB7P26010 798 aa6.9□□□□□ -1.3
ATXN3-228ENST00000554592 DOC2BQ14184 412 aa6.9□□□□□ -1.3
ATXN3-228ENST00000554592 SETDB1Q15047 1291 aa6.9□□□□□ -1.3
ATXN3-228ENST00000554592 DNAJC5GQ8N7S2 189 aa6.9□□□□□ -1.3
ATXN3-228ENST00000554592 FLAD1Q8NFF5 587 aa6.9□□□□□ -1.3
ATXN3-228ENST00000554592 ANKRD24Q8TF21 1146 aa6.9□□□□□ -1.3
ATXN3-228ENST00000554592 ZNF526Q8TF50 670 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-228ENST00000554592 SYTL4Q96C24 671 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-228ENST00000554592 POP1Q99575 1024 aaKnown RBP6.9□□□□□ -1.3
ATXN3-228ENST00000554592 FOXD3Q9UJU5 478 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-228ENST00000554592 DCTN4Q9UJW0 460 aa6.9□□□□□ -1.3
ATXN3-228ENST00000554592 RAB3GAP2Q9H2M9 1393 aa6.9□□□□□ -1.31
ATXN3-228ENST00000554592 LRRC37A3O60309 1634 aa6.9□□□□□ -1.31
ATXN3-228ENST00000554592 K7ELQ4 463 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-228ENST00000554592 CES1P23141 567 aa6.89□□□□□ -1.31
ATXN3-228ENST00000554592 MAPK1P28482 360 aa6.89□□□□□ -1.31
ATXN3-228ENST00000554592 USP5P45974 858 aa6.89□□□□□ -1.31
ATXN3-228ENST00000554592 NKAPLQ5M9Q1 402 aa6.89□□□□□ -1.31
ATXN3-228ENST00000554592 CEP135Q66GS9 1140 aa6.89□□□□□ -1.31
ATXN3-228ENST00000554592 NCAPG2Q86XI2 1143 aa6.89□□□□□ -1.31
ATXN3-228ENST00000554592 CACTIN-AS1Q8N1I8 211 aa6.89□□□□□ -1.31
ATXN3-228ENST00000554592 ZNF428Q96B54 188 aa6.89□□□□□ -1.31
ATXN3-228ENST00000554592 SPACA7Q96KW9 195 aa6.89□□□□□ -1.31
ATXN3-228ENST00000554592 TPSG1Q9NRR2 321 aa6.89□□□□□ -1.31
ATXN3-228ENST00000554592 DZANK1Q9NVP4 752 aa6.89□□□□□ -1.31
ATXN3-228ENST00000554592 CCNL1Q9UK58 526 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-228ENST00000554592 ITSN1Q15811 1721 aa6.89□□□□□ -1.31
ATXN3-228ENST00000554592 ANKRD33BA6NCL7 494 aa6.88□□□□□ -1.31
ATXN3-228ENST00000554592 EREGO14944 169 aa6.88□□□□□ -1.31
ATXN3-228ENST00000554592 TOMM70O94826 608 aa6.88□□□□□ -1.31
ATXN3-228ENST00000554592 NRG1Q02297 640 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-228ENST00000554592 EHHADHQ08426 723 aa6.88□□□□□ -1.31
ATXN3-228ENST00000554592 AAMPQ13685 434 aa6.88□□□□□ -1.31
ATXN3-228ENST00000554592 RSPO4Q2I0M5 234 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-228ENST00000554592 IGF2-ASQ6U949 168 aa6.88□□□□□ -1.31
ATXN3-228ENST00000554592 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.88□□□□□ -1.31
ATXN3-228ENST00000554592 ZCRB1Q8TBF4 217 aaKnown RBP6.88□□□□□ -1.31
ATXN3-228ENST00000554592 PMEPA1Q969W9 287 aa6.88□□□□□ -1.31
ATXN3-228ENST00000554592 SSBP4Q9BWG4 385 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-228ENST00000554592 ADAM19Q9H013 955 aa6.88□□□□□ -1.31
ATXN3-228ENST00000554592 CHD4Q14839 1912 aa6.88□□□□□ -1.31
ATXN3-228ENST00000554592 SBF2Q86WG5 1849 aa6.87□□□□□ -1.31
ATXN3-228ENST00000554592 ADCY9O60503 1353 aa6.87□□□□□ -1.31
ATXN3-228ENST00000554592 USP31Q70CQ4 1352 aa6.87□□□□□ -1.31
ATXN3-228ENST00000554592 KTN1Q86UP2 1357 aaKnown RBP6.87□□□□□ -1.31
ATXN3-228ENST00000554592 TRPA1O75762 1119 aa6.87□□□□□ -1.31
ATXN3-228ENST00000554592 SMNDC1O75940 238 aaKnown RBP eCLIP6.87□□□□□ -1.31
ATXN3-228ENST00000554592 IGHA2P01877 340 aa6.87□□□□□ -1.31
ATXN3-228ENST00000554592 ERCC3P19447 782 aa6.87□□□□□ -1.31
ATXN3-228ENST00000554592 GALNT11Q8NCW6 608 aa6.87□□□□□ -1.31
ATXN3-228ENST00000554592 SNX29Q8TEQ0 813 aa6.87□□□□□ -1.31
ATXN3-228ENST00000554592 IP6K1Q92551 441 aa6.87□□□□□ -1.31
ATXN3-228ENST00000554592 ASB16Q96NS5 453 aa6.87□□□□□ -1.31
ATXN3-228ENST00000554592 HHIPQ96QV1 700 aa6.87□□□□□ -1.31
ATXN3-228ENST00000554592 LACRTQ9GZZ8 138 aa6.87□□□□□ -1.31
ATXN3-228ENST00000554592 SRA1Q9HD15 236 aaKnown RBP6.87□□□□□ -1.31
ATXN3-228ENST00000554592 PPME1Q9Y570 386 aa6.87□□□□□ -1.31
ATXN3-228ENST00000554592 SHANK3Q9BYB0 1731 aa6.87□□□□□ -1.31
ATXN3-228ENST00000554592 ANKRD36BQ8N2N9 1353 aa6.86□□□□□ -1.31
ATXN3-228ENST00000554592 LINC01387J3KSC0 135 aa6.86□□□□□ -1.31
ATXN3-228ENST00000554592 EPHA1P21709 976 aa6.86□□□□□ -1.31
ATXN3-228ENST00000554592 CDC27P30260 824 aa6.86□□□□□ -1.31
ATXN3-228ENST00000554592 PEAR1Q5VY43 1037 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-228ENST00000554592 TXNRD3Q86VQ6 643 aa6.86□□□□□ -1.31
ATXN3-228ENST00000554592 NME9Q86XW9 330 aa6.86□□□□□ -1.31
ATXN3-228ENST00000554592 NPAS4Q8IUM7 802 aa6.86□□□□□ -1.31
ATXN3-228ENST00000554592 LTV1Q96GA3 475 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-228ENST00000554592 FAM129BQ96TA1 746 aa6.86□□□□□ -1.31
ATXN3-228ENST00000554592 RBCK1Q9BYM8 510 aa6.86□□□□□ -1.31
ATXN3-228ENST00000554592 MUC3BQ9H195 1237 aa6.86□□□□□ -1.31
ATXN3-228ENST00000554592 ZFYVE28Q9HCC9 887 aa6.86□□□□□ -1.31
ATXN3-228ENST00000554592 SH2B1Q9NRF2 756 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-228ENST00000554592 BRPF3Q9ULD4 1205 aa6.86□□□□□ -1.31
ATXN3-228ENST00000554592 COL18A1P39060 1754 aa6.86□□□□□ -1.31
ATXN3-228ENST00000554592 ARHGEF28Q8N1W1 1705 aaKnown RBP6.86□□□□□ -1.31
ATXN3-228ENST00000554592 USP47Q96K76 1375 aa6.85□□□□□ -1.31
ATXN3-228ENST00000554592 TOPAZ1Q8N9V7 1692 aa6.85□□□□□ -1.31
ATXN3-228ENST00000554592 CEP350Q5VT06 3117 aa6.85□□□□□ -1.31
ATXN3-228ENST00000554592 NDUFB5O43674 189 aa6.85□□□□□ -1.31
ATXN3-228ENST00000554592 PHACTR2O75167 634 aa6.85□□□□□ -1.31
ATXN3-228ENST00000554592 NOS3P29474 1203 aa6.85□□□□□ -1.31
ATXN3-228ENST00000554592 TMC7Q7Z402 723 aa6.85□□□□□ -1.31
ATXN3-228ENST00000554592 MAP4K3Q8IVH8 894 aa6.85□□□□□ -1.31
ATXN3-228ENST00000554592 TMEM130Q8N3G9 435 aa6.85□□□□□ -1.31
ATXN3-228ENST00000554592 TMEM102Q8N9M5 508 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-228ENST00000554592 TTC16Q8NEE8 873 aa6.85□□□□□ -1.31
ATXN3-228ENST00000554592 WFDC12Q8WWY7 111 aa6.85□□□□□ -1.31
ATXN3-228ENST00000554592 ZKSCAN3Q9BRR0 538 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms