RNA–Protein interactions for RNA: ENST00000554292.1

PCNX1-206, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 402 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-206ENST00000554292 IGF2BP3O00425 579 aaKnown RBP eCLIP34.01■■■■□ 3.03
PCNX1-206ENST00000554292 CYP2D6P10635 497 aa34.01■■■■□ 3.03
PCNX1-206ENST00000554292 LBX1P52954 281 aa34.01■■■■□ 3.03
PCNX1-206ENST00000554292 RRP1BQ14684 758 aaKnown RBP34.01■■■■□ 3.03
PCNX1-206ENST00000554292 TSKSQ9UJT2 592 aa34.01■■■■□ 3.03
PCNX1-206ENST00000554292 GDF11O95390 407 aa34■■■■□ 3.03
PCNX1-206ENST00000554292 CERKLQ49MI3 558 aaPredicted RBP34■■■■□ 3.03
PCNX1-206ENST00000554292 MCMDC2Q4G0Z9 681 aa34■■■■□ 3.03
PCNX1-206ENST00000554292 SBK1Q52WX2 424 aa34■■■■□ 3.03
PCNX1-206ENST00000554292 ERICH6BQ5W0A0 696 aa34■■■■□ 3.03
PCNX1-206ENST00000554292 CTR9Q6PD62 1173 aa34■■■■□ 3.03
PCNX1-206ENST00000554292 ZCCHC17Q9NP64 241 aaKnown RBP34■■■■□ 3.03
PCNX1-206ENST00000554292 DIAPH3Q9NSV4 1193 aa34■■■■□ 3.03
PCNX1-206ENST00000554292 ZBTB21Q9ULJ3 1066 aa34■■■■□ 3.03
PCNX1-206ENST00000554292 AFG3L2Q9Y4W6 797 aa34■■■■□ 3.03
PCNX1-206ENST00000554292 SDSP20132 328 aa33.99■■■■□ 3.03
PCNX1-206ENST00000554292 SHMT1P34896 483 aa33.99■■■■□ 3.03
PCNX1-206ENST00000554292 CFHR5Q9BXR6 569 aa33.99■■■■□ 3.03
PCNX1-206ENST00000554292 MFAP1P55081 439 aaKnown RBP33.98■■■■□ 3.03
PCNX1-206ENST00000554292 NMIQ13287 307 aaPredicted RBP33.98■■■■□ 3.03
PCNX1-206ENST00000554292 FAM227BQ96M60 508 aa33.98■■■■□ 3.03
PCNX1-206ENST00000554292 CABP5Q9NP86 173 aa33.98■■■■□ 3.03
PCNX1-206ENST00000554292 A0A0D9SFI3 127 aa33.97■■■■□ 3.03
PCNX1-206ENST00000554292 IFNL3Q8IZI9 196 aa33.97■■■■□ 3.03
PCNX1-206ENST00000554292 ZNF280CQ8ND82 737 aa33.97■■■■□ 3.03
PCNX1-206ENST00000554292 PTPN18Q99952 460 aa33.97■■■■□ 3.03
PCNX1-206ENST00000554292 EPB41L4AQ9HCS5 686 aaPredicted RBP33.97■■■■□ 3.03
PCNX1-206ENST00000554292 TRIM75PA6NK02 468 aa33.96■■■■□ 3.03
PCNX1-206ENST00000554292 ABCB5Q2M3G0 1257 aa33.96■■■■□ 3.03
PCNX1-206ENST00000554292 CCDC129Q6ZRS4 1044 aa33.96■■■■□ 3.03
PCNX1-206ENST00000554292 FASTKD5Q7L8L6 764 aaKnown RBP33.96■■■■□ 3.03
PCNX1-206ENST00000554292 NAPBQ9H115 298 aa33.96■■■■□ 3.03
PCNX1-206ENST00000554292 FRMD4AQ9P2Q2 1039 aaPredicted RBP33.96■■■■□ 3.03
PCNX1-206ENST00000554292 CYP2D7A0A087X1C5 515 aa33.95■■■■□ 3.03
PCNX1-206ENST00000554292 A0A0G2JLL6 359 aaPredicted RBP33.95■■■■□ 3.03
PCNX1-206ENST00000554292 GH2P01242 217 aa33.95■■■■□ 3.03
PCNX1-206ENST00000554292 GSPT1P15170 499 aaKnown RBP33.95■■■■□ 3.03
PCNX1-206ENST00000554292 C16orf86Q6ZW13 317 aa33.95■■■■□ 3.03
PCNX1-206ENST00000554292 PRRT2Q7Z6L0 340 aaPredicted RBP33.95■■■■□ 3.03
PCNX1-206ENST00000554292 CCDC84Q86UT8 332 aaPredicted RBP33.95■■■■□ 3.03
PCNX1-206ENST00000554292 WDR18Q9BV38 432 aa33.95■■■■□ 3.03
PCNX1-206ENST00000554292 CASP8AP2Q9UKL3 1982 aa33.94■■■■□ 3.02
PCNX1-206ENST00000554292 EVX2Q03828 476 aa33.94■■■■□ 3.02
PCNX1-206ENST00000554292 DYNLL2Q96FJ2 89 aa33.94■■■■□ 3.02
PCNX1-206ENST00000554292 ROBO3Q96MS0 1386 aa33.94■■■■□ 3.02
PCNX1-206ENST00000554292 MINDY4BA8MYZ0 360 aa33.93■■■■□ 3.02
PCNX1-206ENST00000554292 BTBD19C9JJ37 291 aa33.93■■■■□ 3.02
PCNX1-206ENST00000554292 TBC1D8O95759 1140 aa33.93■■■■□ 3.02
PCNX1-206ENST00000554292 SPP2Q13103 211 aa33.93■■■■□ 3.02
PCNX1-206ENST00000554292 ANKRD23Q86SG2 305 aa33.93■■■■□ 3.02
PCNX1-206ENST00000554292 CCDC171Q6TFL3 1326 aa33.93■■■■□ 3.02
PCNX1-206ENST00000554292 CDK8P49336 464 aa33.92■■■■□ 3.02
PCNX1-206ENST00000554292 TAF1CQ15572 869 aaPredicted RBP33.92■■■■□ 3.02
PCNX1-206ENST00000554292 NOM1Q5C9Z4 860 aaKnown RBP33.92■■■■□ 3.02
PCNX1-206ENST00000554292 FAM43AQ8N2R8 423 aa33.92■■■■□ 3.02
PCNX1-206ENST00000554292 SLC44A5Q8NCS7 719 aa33.92■■■■□ 3.02
PCNX1-206ENST00000554292 CCDC17Q96LX7 622 aa33.92■■■■□ 3.02
PCNX1-206ENST00000554292 ZNF287Q9HBT7 754 aa33.92■■■■□ 3.02
PCNX1-206ENST00000554292 LOC285556D6RIA3 1793 aa33.92■■■■□ 3.02
PCNX1-206ENST00000554292 JAG1P78504 1218 aa33.91■■■■□ 3.02
PCNX1-206ENST00000554292 GADL1Q6ZQY3 521 aa33.91■■■■□ 3.02
PCNX1-206ENST00000554292 MPHOSPH10O00566 681 aaKnown RBP33.9■■■■□ 3.02
PCNX1-206ENST00000554292 SLC3A2P08195 630 aaKnown RBP33.9■■■■□ 3.02
PCNX1-206ENST00000554292 CWC27Q6UX04 472 aaKnown RBP33.9■■■■□ 3.02
PCNX1-206ENST00000554292 ZFYVE28Q9HCC9 887 aa33.9■■■■□ 3.02
PCNX1-206ENST00000554292 CRHR2Q13324 411 aa33.89■■■■□ 3.02
PCNX1-206ENST00000554292 MOGSQ13724 837 aa33.89■■■■□ 3.02
PCNX1-206ENST00000554292 RAB3GAP1Q15042 981 aa33.89■■■■□ 3.02
PCNX1-206ENST00000554292 SHROOM1Q2M3G4 852 aaPredicted RBP33.89■■■■□ 3.02
PCNX1-206ENST00000554292 TMEM179Q6ZVK1 233 aa33.89■■■■□ 3.02
PCNX1-206ENST00000554292 PROCA1Q8NCQ7 364 aaPredicted RBP33.89■■■■□ 3.02
PCNX1-206ENST00000554292 ALX1Q15699 326 aa33.88■■■■□ 3.01
PCNX1-206ENST00000554292 ZNF589Q86UQ0 364 aaPredicted RBP33.88■■■■□ 3.01
PCNX1-206ENST00000554292 PPP4R2Q9NY27 417 aa33.88■■■■□ 3.01
PCNX1-206ENST00000554292 C19orf81C9J6K1 198 aa33.87■■■■□ 3.01
PCNX1-206ENST00000554292 USP17L10C9JJH3 530 aa33.87■■■■□ 3.01
PCNX1-206ENST00000554292 PDHXO00330 501 aa33.87■■■■□ 3.01
PCNX1-206ENST00000554292 SH3D19Q5HYK7 790 aa33.87■■■■□ 3.01
PCNX1-206ENST00000554292 MKNK2Q9HBH9 465 aa33.87■■■■□ 3.01
PCNX1-206ENST00000554292 SLC45A1Q9Y2W3 748 aa33.87■■■■□ 3.01
PCNX1-206ENST00000554292 ZMYM6O95789 1325 aa33.86■■■■□ 3.01
PCNX1-206ENST00000554292 GPR25O00155 361 aa33.86■■■■□ 3.01
PCNX1-206ENST00000554292 BACE1P56817 501 aa33.86■■■■□ 3.01
PCNX1-206ENST00000554292 MTMR2Q13614 643 aa33.86■■■■□ 3.01
PCNX1-206ENST00000554292 VPS53Q5VIR6 699 aa33.86■■■■□ 3.01
PCNX1-206ENST00000554292 FEZ1Q99689 392 aa33.86■■■■□ 3.01
PCNX1-206ENST00000554292 TMOD4Q9NZQ9 345 aa33.86■■■■□ 3.01
PCNX1-206ENST00000554292 SMIM22K7EJ46 135 aa33.85■■■■□ 3.01
PCNX1-206ENST00000554292 FOXP2O15409 715 aa33.85■■■■□ 3.01
PCNX1-206ENST00000554292 HSPD1P10809 573 aaKnown RBP33.85■■■■□ 3.01
PCNX1-206ENST00000554292 HMGCS2P54868 508 aa33.85■■■■□ 3.01
PCNX1-206ENST00000554292 PPARAQ07869 468 aa33.85■■■■□ 3.01
PCNX1-206ENST00000554292 RUFY2Q8WXA3 655 aa33.85■■■■□ 3.01
PCNX1-206ENST00000554292 PARK7Q99497 189 aaKnown RBP33.85■■■■□ 3.01
PCNX1-206ENST00000554292 AGTPBP1Q9UPW5 1226 aa33.85■■■■□ 3.01
PCNX1-206ENST00000554292 RAD50Q92878 1312 aa33.84■■■■□ 3.01
PCNX1-206ENST00000554292 PDE4BQ07343 736 aa33.84■■■■□ 3.01
PCNX1-206ENST00000554292 PABPC4Q13310 644 aaKnown RBP eCLIP33.84■■■■□ 3.01
PCNX1-206ENST00000554292 SEPT2Q15019 361 aa33.84■■■■□ 3.01
PCNX1-206ENST00000554292 GPAT2Q6NUI2 795 aa33.84■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms