RNA–Protein interactions for RNA: ENST00000554174.1

LRP1-207, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-207ENST00000554174 DCP1AQ9NPI6 582 aaPredicted RBP14.07□□□□□ -0.16
LRP1-207ENST00000554174 TUBE1Q9UJT0 475 aa14.07□□□□□ -0.16
LRP1-207ENST00000554174 TNRC6CQ9HCJ0 1690 aaKnown RBP14.07□□□□□ -0.16
LRP1-207ENST00000554174 SEMA3EO15041 775 aa14.07□□□□□ -0.16
LRP1-207ENST00000554174 ATP2B1P20020 1258 aa14.07□□□□□ -0.16
LRP1-207ENST00000554174 IFIT1BQ5T764 474 aaKnown RBP14.07□□□□□ -0.16
LRP1-207ENST00000554174 KRI1Q8N9T8 703 aaKnown RBP14.07□□□□□ -0.16
LRP1-207ENST00000554174 HSD3B7Q9H2F3 369 aa14.07□□□□□ -0.16
LRP1-207ENST00000554174 FAM13BQ9NYF5 915 aa14.07□□□□□ -0.16
LRP1-207ENST00000554174 VPS54Q9P1Q0 977 aa14.07□□□□□ -0.16
LRP1-207ENST00000554174 FBXO2Q9UK22 296 aaPredicted RBP14.07□□□□□ -0.16
LRP1-207ENST00000554174 KCNH3Q9ULD8 1083 aa14.07□□□□□ -0.16
LRP1-207ENST00000554174 IRS2Q9Y4H2 1338 aa14.07□□□□□ -0.16
LRP1-207ENST00000554174 TROAPQ12815 778 aa14.06□□□□□ -0.16
LRP1-207ENST00000554174 SLC4A8Q2Y0W8 1093 aa14.06□□□□□ -0.16
LRP1-207ENST00000554174 EARS2Q5JPH6 523 aaKnown RBP14.06□□□□□ -0.16
LRP1-207ENST00000554174 PRIMPOLQ96LW4 560 aa14.06□□□□□ -0.16
LRP1-207ENST00000554174 USP21Q9UK80 565 aa14.06□□□□□ -0.16
LRP1-207ENST00000554174 BAZ2BQ9UIF8 2168 aaKnown RBP14.06□□□□□ -0.16
LRP1-207ENST00000554174 UBAP1LF5GYI3 381 aa14.06□□□□□ -0.16
LRP1-207ENST00000554174 DYNC1I1O14576 645 aa14.06□□□□□ -0.16
LRP1-207ENST00000554174 HSP90AA2PQ14568 343 aaPredicted RBP14.06□□□□□ -0.16
LRP1-207ENST00000554174 FAM47AQ5JRC9 791 aa14.06□□□□□ -0.16
LRP1-207ENST00000554174 RNF26Q9BY78 433 aaPredicted RBP14.06□□□□□ -0.16
LRP1-207ENST00000554174 ANKRD2Q9GZV1 360 aa14.06□□□□□ -0.16
LRP1-207ENST00000554174 CABP5Q9NP86 173 aa14.06□□□□□ -0.16
LRP1-207ENST00000554174 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.06□□□□□ -0.16
LRP1-207ENST00000554174 V9GY48 417 aaPredicted RBP14.06□□□□□ -0.16
LRP1-207ENST00000554174 NHSQ6T4R5 1651 aa14.06□□□□□ -0.16
LRP1-207ENST00000554174 TAF1LQ8IZX4 1826 aa14.06□□□□□ -0.16
LRP1-207ENST00000554174 RILPL1Q5EBL4 403 aa14.05□□□□□ -0.16
LRP1-207ENST00000554174 KRBA2Q6ZNG9 492 aa14.05□□□□□ -0.16
LRP1-207ENST00000554174 CATIPQ7Z7H3 387 aa14.05□□□□□ -0.16
LRP1-207ENST00000554174 XPO4Q9C0E2 1151 aaKnown RBP14.05□□□□□ -0.16
LRP1-207ENST00000554174 IFNKQ9P0W0 207 aa14.05□□□□□ -0.16
LRP1-207ENST00000554174 DLEC1Q9Y238 1755 aa14.05□□□□□ -0.16
LRP1-207ENST00000554174 PDS5AQ29RF7 1337 aaKnown RBP14.05□□□□□ -0.16
LRP1-207ENST00000554174 WNT7AO00755 349 aa14.05□□□□□ -0.16
LRP1-207ENST00000554174 RRP9O43818 475 aaKnown RBP14.05□□□□□ -0.16
LRP1-207ENST00000554174 ATP1A3P13637 1013 aa14.05□□□□□ -0.16
LRP1-207ENST00000554174 BMP6P22004 513 aa14.05□□□□□ -0.16
LRP1-207ENST00000554174 PTPREP23469 700 aa14.05□□□□□ -0.16
LRP1-207ENST00000554174 LMOD1P29536 600 aaPredicted RBP14.05□□□□□ -0.16
LRP1-207ENST00000554174 MDM2Q00987 491 aaPredicted RBP14.05□□□□□ -0.16
LRP1-207ENST00000554174 NFIXQ14938 502 aa14.05□□□□□ -0.16
LRP1-207ENST00000554174 NOM1Q5C9Z4 860 aaKnown RBP14.05□□□□□ -0.16
LRP1-207ENST00000554174 USP49Q70CQ1 688 aa14.05□□□□□ -0.16
LRP1-207ENST00000554174 IQCA1Q86XH1 822 aa14.05□□□□□ -0.16
LRP1-207ENST00000554174 CNNM3Q8NE01 707 aa14.05□□□□□ -0.16
LRP1-207ENST00000554174 C16orf45Q96MC5 204 aaPredicted RBP14.05□□□□□ -0.16
LRP1-207ENST00000554174 PCDHA5Q9Y5H7 936 aa14.05□□□□□ -0.16
LRP1-207ENST00000554174 THSD7AQ9UPZ6 1657 aa14.04□□□□□ -0.16
LRP1-207ENST00000554174 USP27XA6NNY8 438 aa14.04□□□□□ -0.16
LRP1-207ENST00000554174 CCZ1BP86790 482 aa14.04□□□□□ -0.16
LRP1-207ENST00000554174 CCZ1P86791 482 aaPredicted RBP14.04□□□□□ -0.16
LRP1-207ENST00000554174 PHF20Q9BVI0 1012 aa14.04□□□□□ -0.16
LRP1-207ENST00000554174 CRNKL1Q9BZJ0 848 aaKnown RBP14.04□□□□□ -0.16
LRP1-207ENST00000554174 CCDC88AQ3V6T2 1871 aa14.04□□□□□ -0.16
LRP1-207ENST00000554174 KIAA1551Q9HCM1 1747 aa14.03□□□□□ -0.16
LRP1-207ENST00000554174 NPHP1O15259 732 aa14.03□□□□□ -0.16
LRP1-207ENST00000554174 PRPF3O43395 683 aaKnown RBP14.03□□□□□ -0.16
LRP1-207ENST00000554174 SMC2O95347 1197 aa14.03□□□□□ -0.16
LRP1-207ENST00000554174 USP17L8P0C7I0 530 aa14.03□□□□□ -0.16
LRP1-207ENST00000554174 GRIK5Q16478 980 aa14.03□□□□□ -0.16
LRP1-207ENST00000554174 GPR101Q96P66 508 aaPredicted RBP14.03□□□□□ -0.16
LRP1-207ENST00000554174 SBF2Q86WG5 1849 aa14.03□□□□□ -0.16
LRP1-207ENST00000554174 LAMB1P07942 1786 aa14.03□□□□□ -0.16
LRP1-207ENST00000554174 POLR2DO15514 142 aaKnown RBP14.03□□□□□ -0.16
LRP1-207ENST00000554174 PRR29P0C7W0 189 aa14.03□□□□□ -0.16
LRP1-207ENST00000554174 SKILP12757 684 aa14.03□□□□□ -0.16
LRP1-207ENST00000554174 VEGFAP15692 232 aaPredicted RBP14.03□□□□□ -0.16
LRP1-207ENST00000554174 RFC4P35249 363 aa14.03□□□□□ -0.16
LRP1-207ENST00000554174 AKAP17AQ02040 695 aaKnown RBP14.03□□□□□ -0.16
LRP1-207ENST00000554174 PDE4BQ07343 736 aa14.03□□□□□ -0.16
LRP1-207ENST00000554174 PPP2R5BQ15173 497 aa14.03□□□□□ -0.16
LRP1-207ENST00000554174 NPY5RQ15761 445 aa14.03□□□□□ -0.16
LRP1-207ENST00000554174 SRBD1Q8N5C6 995 aaKnown RBP14.03□□□□□ -0.16
LRP1-207ENST00000554174 ANKIB1Q9P2G1 1089 aa14.03□□□□□ -0.16
LRP1-207ENST00000554174 LY75O60449 1722 aa14.03□□□□□ -0.16
LRP1-207ENST00000554174 ORC4O43929 436 aa14.02□□□□□ -0.16
LRP1-207ENST00000554174 PCP11498 1178 aaKnown RBP14.02□□□□□ -0.16
LRP1-207ENST00000554174 GTF2F1P35269 517 aaKnown RBP eCLIP14.02□□□□□ -0.16
LRP1-207ENST00000554174 FAM196AQ6ZSG2 479 aa14.02□□□□□ -0.16
LRP1-207ENST00000554174 TMTC3Q6ZXV5 915 aa14.02□□□□□ -0.16
LRP1-207ENST00000554174 GRAMD1CQ8IYS0 662 aa14.02□□□□□ -0.16
LRP1-207ENST00000554174 CSRNP2Q9H175 543 aa14.02□□□□□ -0.16
LRP1-207ENST00000554174 LRRC4BQ9NT99 713 aa14.02□□□□□ -0.16
LRP1-207ENST00000554174 ATP8A2Q9NTI2 1148 aa14.02□□□□□ -0.16
LRP1-207ENST00000554174 SERTAD1Q9UHV2 236 aa14.02□□□□□ -0.16
LRP1-207ENST00000554174 RIOK3O14730 519 aaKnown RBP14.02□□□□□ -0.17
LRP1-207ENST00000554174 IKBKBO14920 756 aa14.02□□□□□ -0.17
LRP1-207ENST00000554174 ADAMTS3O15072 1205 aa14.02□□□□□ -0.17
LRP1-207ENST00000554174 TRAPPC3LQ5T215 181 aa14.02□□□□□ -0.17
LRP1-207ENST00000554174 DZIP1Q86YF9 867 aaKnown RBP14.02□□□□□ -0.17
LRP1-207ENST00000554174 PDILTQ8N807 584 aa14.02□□□□□ -0.17
LRP1-207ENST00000554174 SRPRBQ9Y5M8 271 aaKnown RBP14.02□□□□□ -0.17
LRP1-207ENST00000554174 CNTNAP5Q8WYK1 1306 aa14.01□□□□□ -0.17
LRP1-207ENST00000554174 SMTNL1A8MU46 457 aa14.01□□□□□ -0.17
LRP1-207ENST00000554174 DDAH1O94760 285 aa14.01□□□□□ -0.17
LRP1-207ENST00000554174 FANCCQ00597 558 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms